Acinetobacter phage Acj61

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Twarogvirinae; Lasallevirus; Acinetobacter virus Acj61

Average proteome isoelectric point is 6.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 241 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E5E492|E5E492_9CAUD Uncharacterized protein OS=Acinetobacter phage Acj61 OX=760732 GN=Acj61p111 PE=4 SV=1
MM1 pKa = 7.62EE2 pKa = 4.86MNLDD6 pKa = 3.27ITHH9 pKa = 7.63LLNEE13 pKa = 4.48DD14 pKa = 3.27SQYY17 pKa = 11.03ATLPGGNNLFRR28 pKa = 11.84AEE30 pKa = 4.14IDD32 pKa = 3.59PNFDD36 pKa = 3.59LDD38 pKa = 3.81YY39 pKa = 10.62QFNVSEE45 pKa = 4.54SSFGLQLTYY54 pKa = 8.35EE55 pKa = 4.49TKK57 pKa = 10.7GG58 pKa = 3.27

Molecular weight: 6.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E5E4M0|E5E4M0_9CAUD Nucleoid disruption protein OS=Acinetobacter phage Acj61 OX=760732 GN=ndd PE=4 SV=1
MM1 pKa = 7.22KK2 pKa = 9.77VKK4 pKa = 10.65SIMRR8 pKa = 11.84VKK10 pKa = 10.63DD11 pKa = 3.39LRR13 pKa = 11.84VVGAQRR19 pKa = 11.84VAQFTSTGKK28 pKa = 10.16LRR30 pKa = 11.84EE31 pKa = 4.1PGKK34 pKa = 10.58NFALGLKK41 pKa = 8.12PTADD45 pKa = 3.49LSRR48 pKa = 11.84PGFYY52 pKa = 10.71FMVHH56 pKa = 5.75PRR58 pKa = 11.84KK59 pKa = 8.06EE60 pKa = 3.96TVYY63 pKa = 10.34ARR65 pKa = 11.84FYY67 pKa = 10.95VGRR70 pKa = 11.84QRR72 pKa = 11.84SKK74 pKa = 10.78QGFNNTASQLRR85 pKa = 11.84LQRR88 pKa = 11.84SSVGEE93 pKa = 4.18VIMNAHH99 pKa = 5.97VPFDD103 pKa = 3.89VFFLPLEE110 pKa = 4.2HH111 pKa = 6.75MKK113 pKa = 10.49PLTNGFMKK121 pKa = 10.71GKK123 pKa = 9.76FALLLTRR130 pKa = 11.84SHH132 pKa = 6.96NDD134 pKa = 2.57RR135 pKa = 11.84FQNLEE140 pKa = 3.78EE141 pKa = 4.41LNRR144 pKa = 11.84MLSDD148 pKa = 3.15NFKK151 pKa = 10.84FYY153 pKa = 10.25AQKK156 pKa = 10.7YY157 pKa = 7.73

Molecular weight: 18.22 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

241

0

241

50364

30

1284

209.0

23.61

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.138 ± 0.199

1.052 ± 0.07

6.209 ± 0.121

6.789 ± 0.187

4.458 ± 0.119

6.119 ± 0.23

1.928 ± 0.089

7.12 ± 0.147

7.073 ± 0.194

7.895 ± 0.154

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.744 ± 0.092

5.639 ± 0.107

3.618 ± 0.093

3.665 ± 0.091

4.275 ± 0.094

6.145 ± 0.154

6.086 ± 0.216

6.761 ± 0.122

1.293 ± 0.068

3.995 ± 0.12
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski