Gryllus bimaculatus nudivirus

Taxonomy: Viruses; Naldaviricetes; Lefavirales; Nudiviridae; Alphanudivirus

Average proteome isoelectric point is 6.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 98 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A4L1W7|A4L1W7_9VIRU Uncharacterized protein OS=Gryllus bimaculatus nudivirus OX=432587 PE=4 SV=1
MM1 pKa = 7.29MNYY4 pKa = 10.21LGLILLVVISIICLVLCILLSNIKK28 pKa = 10.76NNINLDD34 pKa = 3.63KK35 pKa = 11.16QEE37 pKa = 4.16NRR39 pKa = 11.84LDD41 pKa = 3.88LDD43 pKa = 3.6GFQNIITKK51 pKa = 9.78RR52 pKa = 11.84DD53 pKa = 3.59CSSEE57 pKa = 4.07TVYY60 pKa = 10.95SINDD64 pKa = 3.53AQCNQACYY72 pKa = 10.66GNVGQYY78 pKa = 10.26VSQNGICINSLILQSSVIEE97 pKa = 4.33KK98 pKa = 10.57EE99 pKa = 3.92CDD101 pKa = 3.23PKK103 pKa = 11.07KK104 pKa = 10.99GVIAYY109 pKa = 9.5LIGNTQTGQTSLKK122 pKa = 9.78CLSVDD127 pKa = 5.57LGIQSNDD134 pKa = 3.05PDD136 pKa = 4.46GPNVICQNGSIDD148 pKa = 3.57IDD150 pKa = 3.86YY151 pKa = 10.9LKK153 pKa = 10.51EE154 pKa = 3.87FPQIEE159 pKa = 4.38NCKK162 pKa = 10.19CMPSDD167 pKa = 3.77VVGLIPYY174 pKa = 6.75TTSIRR179 pKa = 11.84QHH181 pKa = 6.46ASCVSLNLYY190 pKa = 9.87DD191 pKa = 3.75ALKK194 pKa = 10.99YY195 pKa = 10.63NDD197 pKa = 5.19LIII200 pKa = 5.19

Molecular weight: 22.05 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A4L237|A4L237_9VIRU Putative guanylate kinase OS=Gryllus bimaculatus nudivirus OX=432587 GN=gk PE=4 SV=1
MM1 pKa = 6.77MQLEE5 pKa = 4.33SRR7 pKa = 11.84GNSRR11 pKa = 11.84SRR13 pKa = 11.84SRR15 pKa = 11.84SRR17 pKa = 11.84SRR19 pKa = 11.84SKK21 pKa = 10.68SRR23 pKa = 11.84SRR25 pKa = 11.84SNSRR29 pKa = 11.84SRR31 pKa = 11.84SRR33 pKa = 11.84SKK35 pKa = 10.68SRR37 pKa = 11.84SRR39 pKa = 11.84SNSRR43 pKa = 11.84SRR45 pKa = 11.84RR46 pKa = 11.84SKK48 pKa = 9.25RR49 pKa = 11.84RR50 pKa = 11.84SRR52 pKa = 11.84SRR54 pKa = 11.84SRR56 pKa = 11.84CKK58 pKa = 9.61PSSRR62 pKa = 11.84SRR64 pKa = 11.84SRR66 pKa = 11.84SGRR69 pKa = 11.84RR70 pKa = 11.84RR71 pKa = 11.84RR72 pKa = 11.84SRR74 pKa = 11.84SRR76 pKa = 11.84SRR78 pKa = 11.84SRR80 pKa = 11.84SRR82 pKa = 11.84SCSRR86 pKa = 3.42

Molecular weight: 10.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

98

0

98

30144

56

1329

307.6

35.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.896 ± 0.129

2.292 ± 0.139

5.477 ± 0.128

6.326 ± 0.254

5.66 ± 0.225

2.737 ± 0.161

1.755 ± 0.117

9.428 ± 0.211

9.375 ± 0.228

9.302 ± 0.214

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.738 ± 0.075

9.073 ± 0.206

2.999 ± 0.124

3.032 ± 0.172

3.112 ± 0.156

7.613 ± 0.227

5.951 ± 0.166

5.258 ± 0.158

0.62 ± 0.049

5.354 ± 0.233
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski