Cronobacter phage ENT47670

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 6.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 46 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F1C5E3|F1C5E3_9CAUD Uncharacterized protein OS=Cronobacter phage ENT47670 OX=984186 PE=4 SV=1
MM1 pKa = 8.11AITPITAAQVKK12 pKa = 9.02QQLSSLGYY20 pKa = 9.71SIPDD24 pKa = 4.35FIIDD28 pKa = 4.38AYY30 pKa = 10.7LCKK33 pKa = 10.42LSSIEE38 pKa = 3.93QCLEE42 pKa = 3.36ASGYY46 pKa = 9.39DD47 pKa = 3.25EE48 pKa = 5.48CDD50 pKa = 3.12VVLIQVYY57 pKa = 9.73AVSLMALTAYY67 pKa = 8.81SQRR70 pKa = 11.84IKK72 pKa = 10.78SQSAPSGASRR82 pKa = 11.84SFDD85 pKa = 3.3YY86 pKa = 11.12TGDD89 pKa = 3.68VLSMRR94 pKa = 11.84DD95 pKa = 3.49ALLSLDD101 pKa = 4.29KK102 pKa = 11.08SGCTASLPIDD112 pKa = 3.48VGSRR116 pKa = 11.84VGFFDD121 pKa = 4.66VVGGCC126 pKa = 4.15

Molecular weight: 13.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F1C5C1|F1C5C1_9CAUD Uncharacterized protein OS=Cronobacter phage ENT47670 OX=984186 PE=4 SV=1
MM1 pKa = 7.64RR2 pKa = 11.84KK3 pKa = 9.97SNATYY8 pKa = 10.07AAKK11 pKa = 10.56ALLRR15 pKa = 11.84LPFTVAMAMKK25 pKa = 10.16SCATNAITTFTTLMMKK41 pKa = 10.05ARR43 pKa = 11.84KK44 pKa = 8.82LKK46 pKa = 9.3PSARR50 pKa = 11.84RR51 pKa = 11.84SEE53 pKa = 3.8WSGLNVASGCRR64 pKa = 11.84KK65 pKa = 9.52RR66 pKa = 11.84MQSSRR71 pKa = 11.84CSHH74 pKa = 6.9ASRR77 pKa = 11.84VATYY81 pKa = 9.69RR82 pKa = 11.84LCIILKK88 pKa = 9.97DD89 pKa = 3.7DD90 pKa = 4.13GMTHH94 pKa = 6.74TEE96 pKa = 3.95LCQFARR102 pKa = 11.84MLPTGCHH109 pKa = 5.2SLPRR113 pKa = 11.84QLNSSRR119 pKa = 3.65

Molecular weight: 13.29 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

46

0

46

11892

102

825

258.5

28.74

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.612 ± 0.739

1.144 ± 0.175

5.743 ± 0.277

6.029 ± 0.416

3.557 ± 0.289

6.778 ± 0.338

1.623 ± 0.213

5.642 ± 0.26

5.155 ± 0.368

8.022 ± 0.306

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.598 ± 0.202

4.6 ± 0.253

3.809 ± 0.256

4.549 ± 0.404

6.088 ± 0.381

6.971 ± 0.461

6.054 ± 0.415

7.173 ± 0.342

1.589 ± 0.15

3.263 ± 0.269
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski