Cordyceps fumosorosea (strain ARSEF 2679) (Isaria fumosorosea)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; Cordyceps; Cordyceps fumosorosea

Average proteome isoelectric point is 6.51

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10050 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A162MRH4|A0A162MRH4_CORFA Carnitine O-acetyltransferase OS=Cordyceps fumosorosea (strain ARSEF 2679) OX=1081104 GN=ISF_03444 PE=3 SV=1
MM1 pKa = 7.57TEE3 pKa = 3.59TATAAGQQCTVLYY16 pKa = 9.83FAGASSYY23 pKa = 11.19AGRR26 pKa = 11.84DD27 pKa = 3.6SEE29 pKa = 5.13SFPAPVPLGQLLAAVEE45 pKa = 4.06ARR47 pKa = 11.84HH48 pKa = 5.62PGIRR52 pKa = 11.84GAVLDD57 pKa = 4.03ACLVTVNLDD66 pKa = 3.79YY67 pKa = 11.61VDD69 pKa = 4.22VPAAGDD75 pKa = 3.69EE76 pKa = 4.41GVLIQTADD84 pKa = 3.58EE85 pKa = 4.24VAIIPPVSSGG95 pKa = 3.12

Molecular weight: 9.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A168BMA7|A0A168BMA7_CORFA Uncharacterized protein OS=Cordyceps fumosorosea (strain ARSEF 2679) OX=1081104 GN=ISF_02279 PE=4 SV=1
MM1 pKa = 7.31KK2 pKa = 10.46FSVVLLAAAATSVVGQSATNSSSRR26 pKa = 11.84STTAVASSTSARR38 pKa = 11.84SSASGSATSRR48 pKa = 11.84SASGSATTTARR59 pKa = 11.84SSSVSKK65 pKa = 11.03AGAAPTNAARR75 pKa = 11.84AGAGVAAVAVGVAAMMVV92 pKa = 3.25

Molecular weight: 8.47 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10050

0

10050

4864145

49

5325

484.0

53.14

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.181 ± 0.027

1.232 ± 0.011

5.889 ± 0.018

5.922 ± 0.021

3.55 ± 0.016

7.258 ± 0.024

2.378 ± 0.011

4.32 ± 0.018

4.446 ± 0.022

8.876 ± 0.028

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.198 ± 0.009

3.309 ± 0.014

6.064 ± 0.026

3.921 ± 0.019

6.507 ± 0.024

7.723 ± 0.028

5.808 ± 0.019

6.383 ± 0.018

1.436 ± 0.011

2.598 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski