Simian adenovirus 6

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus A

Average proteome isoelectric point is 6.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 32 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|H9TER0|H9TER0_9ADEN E1B protein small T-antigen OS=Simian adenovirus 6 OX=413259 PE=3 SV=1
MM1 pKa = 7.87RR2 pKa = 11.84NFLLSPGLPATVAAEE17 pKa = 3.97LLEE20 pKa = 5.42DD21 pKa = 3.79IVTGALGDD29 pKa = 3.93DD30 pKa = 3.97PQVISHH36 pKa = 6.59FCEE39 pKa = 4.58DD40 pKa = 4.2FSLHH44 pKa = 6.83DD45 pKa = 5.55LYY47 pKa = 11.28DD48 pKa = 4.02IDD50 pKa = 5.19PGVEE54 pKa = 4.03GQEE57 pKa = 4.33DD58 pKa = 3.75EE59 pKa = 4.35WLEE62 pKa = 4.13SVDD65 pKa = 5.06GFFPDD70 pKa = 4.93AMLLEE75 pKa = 5.16ADD77 pKa = 5.18LPPPHH82 pKa = 6.87NSHH85 pKa = 6.76TEE87 pKa = 4.0PEE89 pKa = 4.32SAAIPEE95 pKa = 4.35LSSGEE100 pKa = 4.27LDD102 pKa = 3.61LACYY106 pKa = 7.85EE107 pKa = 4.29TMPPEE112 pKa = 4.3SDD114 pKa = 4.0EE115 pKa = 4.24EE116 pKa = 4.34DD117 pKa = 3.58SGISDD122 pKa = 3.51PTAFMVSKK130 pKa = 10.74AIAILKK136 pKa = 10.1EE137 pKa = 4.5DD138 pKa = 4.84DD139 pKa = 4.9DD140 pKa = 6.75GDD142 pKa = 4.07DD143 pKa = 4.37GFRR146 pKa = 11.84LDD148 pKa = 4.08APAVPGRR155 pKa = 11.84DD156 pKa = 3.41CKK158 pKa = 10.43SCEE161 pKa = 3.74YY162 pKa = 10.74HH163 pKa = 7.38RR164 pKa = 11.84DD165 pKa = 3.52RR166 pKa = 11.84TGDD169 pKa = 3.47PSMLCSLCYY178 pKa = 10.37LRR180 pKa = 11.84LNAAFVYY187 pKa = 10.67SPVSDD192 pKa = 3.8VEE194 pKa = 4.59EE195 pKa = 4.72PDD197 pKa = 3.39STTGNEE203 pKa = 4.11EE204 pKa = 4.27EE205 pKa = 5.01KK206 pKa = 10.6PSPPKK211 pKa = 9.52LTQRR215 pKa = 11.84CRR217 pKa = 11.84PNILRR222 pKa = 11.84PSAQRR227 pKa = 11.84VSSRR231 pKa = 11.84KK232 pKa = 8.93RR233 pKa = 11.84AAVNCIEE240 pKa = 5.07DD241 pKa = 4.13LLEE244 pKa = 4.59EE245 pKa = 4.21PTEE248 pKa = 4.11PLDD251 pKa = 4.98LSLKK255 pKa = 10.28RR256 pKa = 11.84PRR258 pKa = 11.84PQQ260 pKa = 3.17

Molecular weight: 28.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|H9TES3|H9TES3_9ADEN Hexon protein OS=Simian adenovirus 6 OX=413259 GN=L3 PE=2 SV=1
MM1 pKa = 7.65GKK3 pKa = 8.39LTCRR7 pKa = 11.84LRR9 pKa = 11.84MAVPGYY15 pKa = 9.66RR16 pKa = 11.84GRR18 pKa = 11.84SRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84TLGGSGLRR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84AVHH37 pKa = 6.26RR38 pKa = 11.84RR39 pKa = 11.84LKK41 pKa = 10.98GGILPALIPIIAAAIGAIPGIASVAVQASQRR72 pKa = 11.84HH73 pKa = 4.3

Molecular weight: 7.88 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

27

5

32

10956

73

1169

342.4

38.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.041 ± 0.39

1.972 ± 0.305

4.792 ± 0.281

5.969 ± 0.498

4.116 ± 0.374

5.942 ± 0.405

2.391 ± 0.253

4.08 ± 0.28

3.432 ± 0.317

10.013 ± 0.473

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.191 ± 0.226

4.409 ± 0.553

6.982 ± 0.339

4.253 ± 0.212

7.448 ± 0.67

6.8 ± 0.335

5.814 ± 0.305

6.553 ± 0.395

1.342 ± 0.108

3.459 ± 0.301
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski