Aeromonas virus 44RR2

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Biquartavirus

Average proteome isoelectric point is 6.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 252 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q6U9H7|Q6U9H7_9CAUD Uncharacterized protein OS=Aeromonas virus 44RR2 OX=115987 GN=44RRORF125c PE=4 SV=1
MM1 pKa = 7.94TDD3 pKa = 3.06QQEE6 pKa = 4.24LVMQFRR12 pKa = 11.84PSSTIKK18 pKa = 9.71IWCEE22 pKa = 3.41YY23 pKa = 10.3DD24 pKa = 2.88ISGQFGGNNNEE35 pKa = 4.05EE36 pKa = 4.43VVSITFPEE44 pKa = 4.32HH45 pKa = 4.6VQEE48 pKa = 4.18NEE50 pKa = 3.7RR51 pKa = 11.84NGYY54 pKa = 9.31IEE56 pKa = 5.63DD57 pKa = 3.7VVLTYY62 pKa = 8.99VQKK65 pKa = 8.29MTYY68 pKa = 10.08EE69 pKa = 4.46DD70 pKa = 4.11ADD72 pKa = 4.07SLEE75 pKa = 4.2GLYY78 pKa = 10.49GWEE81 pKa = 5.04HH82 pKa = 7.41IDD84 pKa = 4.45IVNLL88 pKa = 3.6

Molecular weight: 10.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q6U9E5|Q6U9E5_9CAUD Prohead core protein OS=Aeromonas virus 44RR2 OX=115987 GN=67 PE=4 SV=1
MM1 pKa = 7.96LIPSDD6 pKa = 4.48YY7 pKa = 10.26IAEE10 pKa = 4.2AVKK13 pKa = 10.4IEE15 pKa = 4.25AVMADD20 pKa = 2.73ATFRR24 pKa = 11.84VNHH27 pKa = 5.66LVEE30 pKa = 4.89SGFATDD36 pKa = 4.72EE37 pKa = 4.02IVGVISRR44 pKa = 11.84VAASEE49 pKa = 3.84PDD51 pKa = 3.2MAIAMISVVEE61 pKa = 4.22STSIDD66 pKa = 3.55EE67 pKa = 5.51AIVKK71 pKa = 9.52HH72 pKa = 5.4VNSRR76 pKa = 11.84GEE78 pKa = 3.65ITRR81 pKa = 11.84TKK83 pKa = 10.93DD84 pKa = 2.54RR85 pKa = 11.84ATRR88 pKa = 11.84KK89 pKa = 9.63RR90 pKa = 11.84NAFATTGLTASTRR103 pKa = 11.84RR104 pKa = 11.84QIARR108 pKa = 11.84RR109 pKa = 11.84AAKK112 pKa = 9.18TKK114 pKa = 10.08RR115 pKa = 11.84ANPSISVKK123 pKa = 10.17AQRR126 pKa = 11.84KK127 pKa = 4.72TKK129 pKa = 10.23RR130 pKa = 11.84ALKK133 pKa = 9.79RR134 pKa = 11.84RR135 pKa = 11.84KK136 pKa = 9.77ALGLL140 pKa = 3.7

Molecular weight: 15.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

252

0

252

53462

32

1420

212.2

23.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.241 ± 0.205

1.143 ± 0.065

6.41 ± 0.126

6.818 ± 0.217

4.523 ± 0.119

6.625 ± 0.204

2.076 ± 0.083

7.057 ± 0.142

6.586 ± 0.198

7.162 ± 0.124

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.114 ± 0.102

5.318 ± 0.123

3.646 ± 0.086

3.421 ± 0.093

4.807 ± 0.101

6.272 ± 0.148

5.709 ± 0.198

6.779 ± 0.126

1.429 ± 0.07

3.864 ± 0.102
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski