Amino acid dipepetide frequency for Beauveria bassiana polymycovirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
13.784AlaAla: 13.784 ± 3.167
2.089AlaCys: 2.089 ± 0.823
6.266AlaAsp: 6.266 ± 1.131
4.177AlaGlu: 4.177 ± 0.698
4.595AlaPhe: 4.595 ± 1.079
7.101AlaGly: 7.101 ± 1.353
2.924AlaHis: 2.924 ± 0.462
3.759AlaIle: 3.759 ± 0.19
4.177AlaLys: 4.177 ± 1.636
10.86AlaLeu: 10.86 ± 0.844
2.924AlaMet: 2.924 ± 0.763
1.253AlaAsn: 1.253 ± 1.035
7.937AlaPro: 7.937 ± 1.581
4.177AlaGln: 4.177 ± 1.643
9.607AlaArg: 9.607 ± 2.142
8.354AlaSer: 8.354 ± 1.655
5.43AlaThr: 5.43 ± 2.048
12.531AlaVal: 12.531 ± 2.741
1.671AlaTrp: 1.671 ± 0.633
2.506AlaTyr: 2.506 ± 1.009
0.0AlaXaa: 0.0 ± 0.0
Cys
2.089CysAla: 2.089 ± 1.239
0.418CysCys: 0.418 ± 0.315
0.835CysAsp: 0.835 ± 0.423
2.089CysGlu: 2.089 ± 1.239
0.0CysPhe: 0.0 ± 0.0
0.835CysGly: 0.835 ± 0.572
0.0CysHis: 0.0 ± 0.0
0.835CysIle: 0.835 ± 0.63
0.418CysLys: 0.418 ± 0.345
1.671CysLeu: 1.671 ± 0.941
0.835CysMet: 0.835 ± 0.346
0.0CysAsn: 0.0 ± 0.0
0.835CysPro: 0.835 ± 0.321
0.418CysGln: 0.418 ± 0.315
3.342CysArg: 3.342 ± 0.645
1.253CysSer: 1.253 ± 0.594
0.835CysThr: 0.835 ± 0.423
1.671CysVal: 1.671 ± 0.847
0.0CysTrp: 0.0 ± 0.0
0.418CysTyr: 0.418 ± 0.353
0.0CysXaa: 0.0 ± 0.0
Asp
10.025AspAla: 10.025 ± 2.802
0.835AspCys: 0.835 ± 0.63
6.683AspAsp: 6.683 ± 1.279
2.089AspGlu: 2.089 ± 0.73
2.089AspPhe: 2.089 ± 0.904
6.683AspGly: 6.683 ± 2.509
2.089AspHis: 2.089 ± 0.509
3.342AspIle: 3.342 ± 0.954
2.506AspLys: 2.506 ± 1.189
5.848AspLeu: 5.848 ± 2.459
1.671AspMet: 1.671 ± 0.692
0.418AspAsn: 0.418 ± 0.345
5.43AspPro: 5.43 ± 0.491
1.253AspGln: 1.253 ± 0.481
4.595AspArg: 4.595 ± 1.519
4.595AspSer: 4.595 ± 0.972
2.924AspThr: 2.924 ± 0.981
10.025AspVal: 10.025 ± 2.018
0.418AspTrp: 0.418 ± 0.533
1.671AspTyr: 1.671 ± 0.908
0.0AspXaa: 0.0 ± 0.0
Glu
6.266GluAla: 6.266 ± 1.973
1.253GluCys: 1.253 ± 0.713
1.671GluAsp: 1.671 ± 0.974
1.253GluGlu: 1.253 ± 0.945
2.089GluPhe: 2.089 ± 0.509
2.924GluGly: 2.924 ± 0.981
0.835GluHis: 0.835 ± 0.321
2.089GluIle: 2.089 ± 0.999
2.089GluLys: 2.089 ± 1.288
4.595GluLeu: 4.595 ± 0.952
1.253GluMet: 1.253 ± 0.908
0.418GluAsn: 0.418 ± 0.345
1.253GluPro: 1.253 ± 0.481
1.253GluGln: 1.253 ± 0.244
4.595GluArg: 4.595 ± 1.363
1.671GluSer: 1.671 ± 0.633
1.253GluThr: 1.253 ± 0.244
4.595GluVal: 4.595 ± 0.814
1.253GluTrp: 1.253 ± 0.658
3.759GluTyr: 3.759 ± 0.719
0.0GluXaa: 0.0 ± 0.0
Phe
2.506PheAla: 2.506 ± 0.876
1.671PheCys: 1.671 ± 0.444
5.013PheAsp: 5.013 ± 2.088
2.089PheGlu: 2.089 ± 0.447
0.418PhePhe: 0.418 ± 0.353
2.089PheGly: 2.089 ± 0.881
0.0PheHis: 0.0 ± 0.0
1.253PheIle: 1.253 ± 0.481
0.418PheLys: 0.418 ± 0.353
3.342PheLeu: 3.342 ± 0.778
0.418PheMet: 0.418 ± 0.353
0.835PheAsn: 0.835 ± 0.346
0.835PhePro: 0.835 ± 0.423
0.418PheGln: 0.418 ± 0.345
0.835PheArg: 0.835 ± 0.558
3.759PheSer: 3.759 ± 1.071
1.253PheThr: 1.253 ± 1.035
4.177PheVal: 4.177 ± 1.177
0.0PheTrp: 0.0 ± 0.0
0.835PheTyr: 0.835 ± 0.321
0.0PheXaa: 0.0 ± 0.0
Gly
7.519GlyAla: 7.519 ± 1.235
1.253GlyCys: 1.253 ± 0.594
4.595GlyAsp: 4.595 ± 0.604
5.013GlyGlu: 5.013 ± 1.897
2.506GlyPhe: 2.506 ± 0.487
8.772GlyGly: 8.772 ± 1.664
0.835GlyHis: 0.835 ± 0.572
2.506GlyIle: 2.506 ± 0.876
2.506GlyLys: 2.506 ± 0.796
3.759GlyLeu: 3.759 ± 0.561
2.924GlyMet: 2.924 ± 1.07
0.835GlyAsn: 0.835 ± 0.346
4.177GlyPro: 4.177 ± 0.835
4.595GlyGln: 4.595 ± 1.819
8.354GlyArg: 8.354 ± 1.17
4.595GlySer: 4.595 ± 1.182
1.671GlyThr: 1.671 ± 0.514
11.696GlyVal: 11.696 ± 0.435
0.0GlyTrp: 0.0 ± 0.0
2.506GlyTyr: 2.506 ± 0.664
0.0GlyXaa: 0.0 ± 0.0
His
1.253HisAla: 1.253 ± 0.587
0.418HisCys: 0.418 ± 0.315
1.671HisAsp: 1.671 ± 0.932
1.253HisGlu: 1.253 ± 0.608
0.835HisPhe: 0.835 ± 0.63
2.089HisGly: 2.089 ± 1.238
1.253HisHis: 1.253 ± 0.713
0.0HisIle: 0.0 ± 0.0
0.418HisLys: 0.418 ± 0.345
2.924HisLeu: 2.924 ± 0.959
0.0HisMet: 0.0 ± 0.338
0.418HisAsn: 0.418 ± 0.315
0.835HisPro: 0.835 ± 0.346
0.0HisGln: 0.0 ± 0.0
2.924HisArg: 2.924 ± 0.981
2.089HisSer: 2.089 ± 0.468
0.835HisThr: 0.835 ± 0.572
1.671HisVal: 1.671 ± 0.908
0.0HisTrp: 0.0 ± 0.0
1.253HisTyr: 1.253 ± 0.945
0.0HisXaa: 0.0 ± 0.0
Ile
4.595IleAla: 4.595 ± 1.033
0.418IleCys: 0.418 ± 0.315
2.506IleAsp: 2.506 ± 0.701
0.835IleGlu: 0.835 ± 0.69
0.418IlePhe: 0.418 ± 0.345
3.342IleGly: 3.342 ± 0.81
0.0IleHis: 0.0 ± 0.0
1.253IleIle: 1.253 ± 0.244
0.418IleLys: 0.418 ± 0.353
2.506IleLeu: 2.506 ± 0.486
0.835IleMet: 0.835 ± 1.066
1.253IleAsn: 1.253 ± 0.713
1.671IlePro: 1.671 ± 0.571
0.835IleGln: 0.835 ± 0.346
2.089IleArg: 2.089 ± 0.881
0.835IleSer: 0.835 ± 0.346
2.089IleThr: 2.089 ± 0.447
3.759IleVal: 3.759 ± 0.364
0.0IleTrp: 0.0 ± 0.0
0.418IleTyr: 0.418 ± 0.315
0.0IleXaa: 0.0 ± 0.0
Lys
3.759LysAla: 3.759 ± 0.927
1.253LysCys: 1.253 ± 0.713
2.089LysAsp: 2.089 ± 0.871
0.835LysGlu: 0.835 ± 0.572
0.835LysPhe: 0.835 ± 0.346
2.924LysGly: 2.924 ± 0.841
1.253LysHis: 1.253 ± 0.594
0.418LysIle: 0.418 ± 0.345
2.089LysLys: 2.089 ± 0.981
2.506LysLeu: 2.506 ± 1.52
0.0LysMet: 0.0 ± 0.0
0.0LysAsn: 0.0 ± 0.0
1.253LysPro: 1.253 ± 0.244
0.0LysGln: 0.0 ± 0.0
3.759LysArg: 3.759 ± 0.804
3.342LysSer: 3.342 ± 0.354
1.671LysThr: 1.671 ± 0.951
1.253LysVal: 1.253 ± 0.594
0.835LysTrp: 0.835 ± 0.69
0.418LysTyr: 0.418 ± 0.345
0.0LysXaa: 0.0 ± 0.0
Leu
9.607LeuAla: 9.607 ± 1.682
0.835LeuCys: 0.835 ± 0.423
7.101LeuAsp: 7.101 ± 1.8
3.342LeuGlu: 3.342 ± 0.778
2.506LeuPhe: 2.506 ± 1.034
4.595LeuGly: 4.595 ± 1.164
2.089LeuHis: 2.089 ± 1.241
2.924LeuIle: 2.924 ± 0.596
2.089LeuLys: 2.089 ± 0.881
6.683LeuLeu: 6.683 ± 1.349
3.759LeuMet: 3.759 ± 0.69
0.835LeuAsn: 0.835 ± 0.321
2.924LeuPro: 2.924 ± 0.724
2.924LeuGln: 2.924 ± 0.61
7.519LeuArg: 7.519 ± 1.631
7.519LeuSer: 7.519 ± 1.293
5.013LeuThr: 5.013 ± 1.283
8.772LeuVal: 8.772 ± 1.496
0.418LeuTrp: 0.418 ± 0.533
0.835LeuTyr: 0.835 ± 0.69
0.0LeuXaa: 0.0 ± 0.0
Met
4.595MetAla: 4.595 ± 0.756
0.418MetCys: 0.418 ± 0.315
0.418MetAsp: 0.418 ± 0.345
1.253MetGlu: 1.253 ± 0.587
0.418MetPhe: 0.418 ± 0.345
2.506MetGly: 2.506 ± 0.796
0.418MetHis: 0.418 ± 0.345
0.835MetIle: 0.835 ± 0.705
0.0MetLys: 0.0 ± 0.0
1.253MetLeu: 1.253 ± 0.587
0.0MetMet: 0.0 ± 0.0
0.0MetAsn: 0.0 ± 0.0
2.089MetPro: 2.089 ± 0.447
0.418MetGln: 0.418 ± 0.353
1.671MetArg: 1.671 ± 1.04
4.177MetSer: 4.177 ± 1.201
0.0MetThr: 0.0 ± 0.0
2.089MetVal: 2.089 ± 1.025
0.418MetTrp: 0.418 ± 0.345
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
0.835AsnAla: 0.835 ± 0.558
0.0AsnCys: 0.0 ± 0.0
2.089AsnAsp: 2.089 ± 0.599
0.0AsnGlu: 0.0 ± 0.0
0.0AsnPhe: 0.0 ± 0.0
0.835AsnGly: 0.835 ± 0.346
0.0AsnHis: 0.0 ± 0.0
0.418AsnIle: 0.418 ± 0.353
1.253AsnLys: 1.253 ± 0.534
0.835AsnLeu: 0.835 ± 0.346
0.835AsnMet: 0.835 ± 0.69
0.0AsnAsn: 0.0 ± 0.0
0.835AsnPro: 0.835 ± 0.69
0.835AsnGln: 0.835 ± 0.321
1.253AsnArg: 1.253 ± 0.658
1.671AsnSer: 1.671 ± 0.421
2.089AsnThr: 2.089 ± 0.447
0.418AsnVal: 0.418 ± 0.315
0.0AsnTrp: 0.0 ± 0.0
0.418AsnTyr: 0.418 ± 0.533
0.0AsnXaa: 0.0 ± 0.0
Pro
7.937ProAla: 7.937 ± 2.482
0.835ProCys: 0.835 ± 0.321
2.924ProAsp: 2.924 ± 1.309
2.506ProGlu: 2.506 ± 0.768
1.253ProPhe: 1.253 ± 0.594
4.177ProGly: 4.177 ± 1.448
1.671ProHis: 1.671 ± 0.421
1.253ProIle: 1.253 ± 0.594
0.835ProLys: 0.835 ± 0.346
6.266ProLeu: 6.266 ± 1.583
0.418ProMet: 0.418 ± 0.353
0.418ProAsn: 0.418 ± 0.353
2.089ProPro: 2.089 ± 0.836
1.671ProGln: 1.671 ± 0.951
5.43ProArg: 5.43 ± 1.691
3.342ProSer: 3.342 ± 1.816
2.506ProThr: 2.506 ± 0.622
3.759ProVal: 3.759 ± 0.731
0.418ProTrp: 0.418 ± 0.315
1.671ProTyr: 1.671 ± 0.308
0.0ProXaa: 0.0 ± 0.0
Gln
2.089GlnAla: 2.089 ± 1.504
1.253GlnCys: 1.253 ± 0.658
2.089GlnAsp: 2.089 ± 0.73
1.253GlnGlu: 1.253 ± 0.787
0.835GlnPhe: 0.835 ± 0.423
2.506GlnGly: 2.506 ± 0.844
0.835GlnHis: 0.835 ± 0.705
0.418GlnIle: 0.418 ± 0.315
0.418GlnLys: 0.418 ± 0.533
1.253GlnLeu: 1.253 ± 1.035
0.0GlnMet: 0.0 ± 0.0
0.418GlnAsn: 0.418 ± 0.345
1.671GlnPro: 1.671 ± 0.951
0.418GlnGln: 0.418 ± 0.345
2.924GlnArg: 2.924 ± 0.467
2.924GlnSer: 2.924 ± 1.485
0.418GlnThr: 0.418 ± 0.345
4.177GlnVal: 4.177 ± 1.533
0.418GlnTrp: 0.418 ± 0.353
1.253GlnTyr: 1.253 ± 0.469
0.0GlnXaa: 0.0 ± 0.0
Arg
7.937ArgAla: 7.937 ± 2.272
0.418ArgCys: 0.418 ± 0.353
5.013ArgAsp: 5.013 ± 0.925
5.013ArgGlu: 5.013 ± 1.224
4.595ArgPhe: 4.595 ± 1.439
7.101ArgGly: 7.101 ± 2.38
2.506ArgHis: 2.506 ± 0.487
3.759ArgIle: 3.759 ± 0.719
2.924ArgLys: 2.924 ± 0.943
8.772ArgLeu: 8.772 ± 0.916
2.089ArgMet: 2.089 ± 0.447
3.342ArgAsn: 3.342 ± 0.923
5.013ArgPro: 5.013 ± 1.282
1.253ArgGln: 1.253 ± 0.534
7.937ArgArg: 7.937 ± 1.721
5.013ArgSer: 5.013 ± 1.282
5.43ArgThr: 5.43 ± 0.491
8.354ArgVal: 8.354 ± 1.205
0.0ArgTrp: 0.0 ± 0.0
2.506ArgTyr: 2.506 ± 0.622
0.0ArgXaa: 0.0 ± 0.0
Ser
11.278SerAla: 11.278 ± 2.693
1.253SerCys: 1.253 ± 0.469
7.519SerAsp: 7.519 ± 1.656
4.595SerGlu: 4.595 ± 1.078
3.759SerPhe: 3.759 ± 0.804
5.013SerGly: 5.013 ± 0.674
1.253SerHis: 1.253 ± 0.244
0.418SerIle: 0.418 ± 0.353
1.671SerLys: 1.671 ± 0.421
4.177SerLeu: 4.177 ± 0.795
0.418SerMet: 0.418 ± 0.315
0.418SerAsn: 0.418 ± 0.353
4.595SerPro: 4.595 ± 1.633
2.506SerGln: 2.506 ± 0.701
6.266SerArg: 6.266 ± 1.418
5.013SerSer: 5.013 ± 1.544
2.924SerThr: 2.924 ± 1.008
8.772SerVal: 8.772 ± 0.474
0.418SerTrp: 0.418 ± 0.353
2.089SerTyr: 2.089 ± 0.73
0.0SerXaa: 0.0 ± 0.0
Thr
3.342ThrAla: 3.342 ± 0.965
0.418ThrCys: 0.418 ± 0.315
3.759ThrAsp: 3.759 ± 0.19
2.089ThrGlu: 2.089 ± 0.868
0.835ThrPhe: 0.835 ± 0.423
4.177ThrGly: 4.177 ± 0.698
1.253ThrHis: 1.253 ± 0.244
2.506ThrIle: 2.506 ± 0.796
2.089ThrLys: 2.089 ± 0.396
5.848ThrLeu: 5.848 ± 0.952
1.253ThrMet: 1.253 ± 0.713
0.0ThrAsn: 0.0 ± 0.0
1.671ThrPro: 1.671 ± 0.641
0.418ThrGln: 0.418 ± 0.345
3.342ThrArg: 3.342 ± 0.889
4.177ThrSer: 4.177 ± 1.18
2.924ThrThr: 2.924 ± 1.333
5.848ThrVal: 5.848 ± 1.247
0.418ThrTrp: 0.418 ± 0.315
0.418ThrTyr: 0.418 ± 0.533
0.0ThrXaa: 0.0 ± 0.0
Val
12.114ValAla: 12.114 ± 2.075
3.342ValCys: 3.342 ± 1.277
11.696ValAsp: 11.696 ± 2.895
5.43ValGlu: 5.43 ± 1.348
3.759ValPhe: 3.759 ± 1.403
9.19ValGly: 9.19 ± 3.007
3.342ValHis: 3.342 ± 1.292
1.671ValIle: 1.671 ± 0.421
3.342ValLys: 3.342 ± 0.81
6.683ValLeu: 6.683 ± 1.778
1.671ValMet: 1.671 ± 0.908
2.924ValAsn: 2.924 ± 0.996
4.595ValPro: 4.595 ± 1.529
3.342ValGln: 3.342 ± 1.279
10.443ValArg: 10.443 ± 0.707
5.43ValSer: 5.43 ± 0.82
5.848ValThr: 5.848 ± 0.882
9.19ValVal: 9.19 ± 2.448
0.418ValTrp: 0.418 ± 0.345
2.089ValTyr: 2.089 ± 1.118
0.0ValXaa: 0.0 ± 0.0
Trp
0.835TrpAla: 0.835 ± 0.572
0.418TrpCys: 0.418 ± 0.315
0.418TrpAsp: 0.418 ± 0.345
0.418TrpGlu: 0.418 ± 0.353
0.0TrpPhe: 0.0 ± 0.0
1.253TrpGly: 1.253 ± 0.727
0.0TrpHis: 0.0 ± 0.0
0.418TrpIle: 0.418 ± 0.315
0.418TrpLys: 0.418 ± 0.533
0.418TrpLeu: 0.418 ± 0.345
0.0TrpMet: 0.0 ± 0.0
0.835TrpAsn: 0.835 ± 0.423
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.418TrpArg: 0.418 ± 0.345
0.835TrpSer: 0.835 ± 0.346
0.0TrpThr: 0.0 ± 0.0
0.835TrpVal: 0.835 ± 0.346
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.759TyrAla: 3.759 ± 1.052
0.0TyrCys: 0.0 ± 0.0
0.835TyrAsp: 0.835 ± 0.321
0.835TyrGlu: 0.835 ± 0.558
0.418TyrPhe: 0.418 ± 0.315
2.506TyrGly: 2.506 ± 0.622
0.0TyrHis: 0.0 ± 0.0
0.0TyrIle: 0.0 ± 0.0
0.418TyrLys: 0.418 ± 0.345
2.089TyrLeu: 2.089 ± 0.881
1.253TyrMet: 1.253 ± 0.76
0.0TyrAsn: 0.0 ± 0.0
1.671TyrPro: 1.671 ± 0.308
0.835TyrGln: 0.835 ± 0.346
1.671TyrArg: 1.671 ± 0.514
3.759TyrSer: 3.759 ± 1.365
1.671TyrThr: 1.671 ± 0.641
2.924TyrVal: 2.924 ± 1.129
0.418TyrTrp: 0.418 ± 0.315
0.0TyrTyr: 0.0 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 4 proteins (2395 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski