Acidiluteibacter ferrifornacis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Acidiluteibacter

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3010 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6N9NN41|A0A6N9NN41_9FLAO Methyltransferase domain-containing protein OS=Acidiluteibacter ferrifornacis OX=2692424 GN=GQN54_10940 PE=4 SV=1
MM1 pKa = 7.82KK2 pKa = 10.32KK3 pKa = 10.06RR4 pKa = 11.84LLSVGLLLLSFAGYY18 pKa = 9.06SQIFLDD24 pKa = 4.12EE25 pKa = 4.57DD26 pKa = 4.12FEE28 pKa = 4.88TFTVGAAGPTFANGWTNSGTTTPRR52 pKa = 11.84WEE54 pKa = 4.15VEE56 pKa = 4.09DD57 pKa = 3.4ATGANEE63 pKa = 3.86NSLATGPFFDD73 pKa = 3.94ATSPTVAGGKK83 pKa = 9.28YY84 pKa = 10.19LYY86 pKa = 10.83LEE88 pKa = 4.39TSGGALNDD96 pKa = 3.55QNTLSSPPVSIPMSATGVKK115 pKa = 10.23LDD117 pKa = 3.91FAYY120 pKa = 10.78HH121 pKa = 5.5MFGASMGEE129 pKa = 4.08LYY131 pKa = 10.97VVIDD135 pKa = 3.97TNNVSDD141 pKa = 4.16TVVTLIGQQQTSGADD156 pKa = 3.42PFITSSTILTGYY168 pKa = 9.59AGKK171 pKa = 8.28TLTVKK176 pKa = 10.68FIGKK180 pKa = 9.85RR181 pKa = 11.84GTSYY185 pKa = 10.5TGDD188 pKa = 3.09ISIDD192 pKa = 3.67EE193 pKa = 4.5VKK195 pKa = 10.64LFQPVPNEE203 pKa = 3.74MGITEE208 pKa = 4.22ITTPTSSCGLTASEE222 pKa = 4.48VVTIEE227 pKa = 3.82VQNFGTSNITSFDD240 pKa = 3.15ASFSINGGTPVTEE253 pKa = 4.34TVTTTITPNSIYY265 pKa = 10.33SYY267 pKa = 10.23TFTATANLSAFGPYY281 pKa = 8.35EE282 pKa = 3.93VKK284 pKa = 10.71SYY286 pKa = 9.3VTLLNDD292 pKa = 3.59PTSSNDD298 pKa = 3.56TLVKK302 pKa = 10.67NITNIPILNGFPYY315 pKa = 10.98LEE317 pKa = 4.35TFEE320 pKa = 5.02SGPGGWISGGTNSSWALGTPAGTVINSAAGGTNSWVTNLTGTYY363 pKa = 9.72NATEE367 pKa = 3.81ASYY370 pKa = 11.27VVSPCFDD377 pKa = 3.53FTSLVAPVFSADD389 pKa = 3.31VWWNSEE395 pKa = 3.92FSWDD399 pKa = 3.51GAILQTSIDD408 pKa = 5.21GGTTWQKK415 pKa = 10.93VGANGDD421 pKa = 3.78PNNWYY426 pKa = 8.91TDD428 pKa = 3.48NTISGLTPLAPSQEE442 pKa = 4.01GWTGRR447 pKa = 11.84NSTSNGSGGWVKK459 pKa = 10.63VKK461 pKa = 10.94APLTGLGSVSGVILRR476 pKa = 11.84IAFGSDD482 pKa = 2.8GSVMDD487 pKa = 4.46EE488 pKa = 4.63GFAFDD493 pKa = 5.37NIQIYY498 pKa = 7.61DD499 pKa = 3.89TPAQDD504 pKa = 5.29AEE506 pKa = 4.5LLSITSPINGCGLTSTEE523 pKa = 3.88QAEE526 pKa = 4.41VQIVNAGSASISNFPVSITVNGGTPLTEE554 pKa = 4.07TVTATILPLDD564 pKa = 3.57TLFYY568 pKa = 10.48TFTGTVNLSTTGNYY582 pKa = 9.82SIKK585 pKa = 10.36AYY587 pKa = 9.67TGLTGDD593 pKa = 4.51GLSSNDD599 pKa = 3.2TATKK603 pKa = 10.25VVTHH607 pKa = 6.6IPIISTFPYY616 pKa = 8.68STSFEE621 pKa = 4.14NSNEE625 pKa = 3.69GWLSSGINNSWSLGVPAGSIIDD647 pKa = 3.76TASNGTKK654 pKa = 10.2AWVTNLNGVYY664 pKa = 10.59NNNEE668 pKa = 3.57QSFVVSPCLDD678 pKa = 3.58FTNLTSPLISLDD690 pKa = 3.15IQYY693 pKa = 10.99EE694 pKa = 4.15LDD696 pKa = 3.48NSNDD700 pKa = 3.32GVVLQSSIDD709 pKa = 4.49GGATWQKK716 pKa = 10.43VGAFGSPNNWYY727 pKa = 8.87TDD729 pKa = 3.37NTIVGLSSIEE739 pKa = 3.95TSQEE743 pKa = 3.12GWTGSGTSGSNGWKK757 pKa = 9.51SARR760 pKa = 11.84AALSGLGGEE769 pKa = 4.38PSVILRR775 pKa = 11.84IALGTNGFTTFEE787 pKa = 4.07GFAFDD792 pKa = 4.18NVTIQEE798 pKa = 4.43APSTDD803 pKa = 3.16AGVVDD808 pKa = 5.68IIDD811 pKa = 4.08PASGCGLSSAEE822 pKa = 4.12VVTVRR827 pKa = 11.84IVNDD831 pKa = 3.62GATNISNFPVSVVLNNGTPLTEE853 pKa = 4.2TVTATMLPNDD863 pKa = 3.71TLTYY867 pKa = 10.32TFTGTLNMSALGTYY881 pKa = 10.1SVVSYY886 pKa = 10.53TSLPLDD892 pKa = 3.59GFNVNDD898 pKa = 4.0TASKK902 pKa = 8.75TVVNIPVISGFPYY915 pKa = 9.56TEE917 pKa = 4.08SFEE920 pKa = 4.28TSAGGWTVDD929 pKa = 3.24GGTSSFALGAPIGSLINSASNGTQAWVTNLSGNYY963 pKa = 9.49LADD966 pKa = 3.23EE967 pKa = 4.58AGYY970 pKa = 10.77VKK972 pKa = 10.55SPCLDD977 pKa = 3.8FSTLIAPIISMDD989 pKa = 3.44VWWNSEE995 pKa = 3.95FSWDD999 pKa = 3.6GAVLQSSIDD1008 pKa = 4.72GGTTWQKK1015 pKa = 10.65VGSFGDD1021 pKa = 3.58PNNWYY1026 pKa = 10.18NDD1028 pKa = 3.16NSINGLNTGSPILEE1042 pKa = 4.11PSGEE1046 pKa = 3.97GWTGRR1051 pKa = 11.84NSSSNGSNGWVNATHH1066 pKa = 6.51QLTGLGGQPGVIFRR1080 pKa = 11.84VAFGSDD1086 pKa = 3.14GSVMDD1091 pKa = 4.46EE1092 pKa = 4.54GFAFDD1097 pKa = 3.9NVQIYY1102 pKa = 7.96EE1103 pKa = 4.31SPAVDD1108 pKa = 3.61IKK1110 pKa = 11.43AMEE1113 pKa = 4.05VSRR1116 pKa = 11.84PLVGCGLSATEE1127 pKa = 4.48TIAARR1132 pKa = 11.84YY1133 pKa = 7.53EE1134 pKa = 4.02NLGTDD1139 pKa = 3.42TLTNFPVAYY1148 pKa = 9.39SVNGVAITPEE1158 pKa = 4.3TFTDD1162 pKa = 3.59TLFPGDD1168 pKa = 3.45KK1169 pKa = 9.91KK1170 pKa = 11.09SYY1172 pKa = 10.65EE1173 pKa = 4.14FTTTANLSSTIQYY1186 pKa = 9.18TIEE1189 pKa = 3.93VWSAAAGDD1197 pKa = 4.9AITSNDD1203 pKa = 3.54TASVTFTNIAASTNPYY1219 pKa = 9.13PQTFDD1224 pKa = 3.48VLTDD1228 pKa = 3.71GATDD1232 pKa = 3.85FSPINWTPINAGAFDD1247 pKa = 3.72WRR1249 pKa = 11.84AEE1251 pKa = 4.15TT1252 pKa = 4.54

Molecular weight: 131.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6N9NJ49|A0A6N9NJ49_9FLAO DUF4834 family protein OS=Acidiluteibacter ferrifornacis OX=2692424 GN=GQN54_07115 PE=4 SV=1
MM1 pKa = 7.19IQQEE5 pKa = 4.43SRR7 pKa = 11.84LSVADD12 pKa = 3.32NSGAKK17 pKa = 9.22EE18 pKa = 3.93VLCIRR23 pKa = 11.84VLGGTGKK30 pKa = 10.44RR31 pKa = 11.84YY32 pKa = 10.3ARR34 pKa = 11.84IGDD37 pKa = 3.98KK38 pKa = 10.52IVVSVKK44 pKa = 10.53SAIPSGNIKK53 pKa = 10.12KK54 pKa = 10.34GAVSKK59 pKa = 10.89AVVVRR64 pKa = 11.84TRR66 pKa = 11.84KK67 pKa = 9.57EE68 pKa = 3.23IRR70 pKa = 11.84RR71 pKa = 11.84PDD73 pKa = 3.16GSYY76 pKa = 10.62IRR78 pKa = 11.84FDD80 pKa = 3.58NNAVVLLNAAGEE92 pKa = 4.21MRR94 pKa = 11.84GTRR97 pKa = 11.84IFGPVARR104 pKa = 11.84EE105 pKa = 3.54LRR107 pKa = 11.84DD108 pKa = 3.52RR109 pKa = 11.84QFMKK113 pKa = 10.24IVSLAPEE120 pKa = 4.12VLL122 pKa = 3.56

Molecular weight: 13.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3010

0

3010

1071256

27

3996

355.9

40.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.337 ± 0.056

0.793 ± 0.019

5.372 ± 0.041

6.467 ± 0.056

5.236 ± 0.041

6.461 ± 0.052

1.686 ± 0.021

8.146 ± 0.045

7.221 ± 0.067

9.23 ± 0.062

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.157 ± 0.025

6.216 ± 0.053

3.405 ± 0.028

3.526 ± 0.029

3.423 ± 0.032

7.172 ± 0.049

5.699 ± 0.077

6.205 ± 0.038

1.051 ± 0.019

4.196 ± 0.035
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski