Hubei odonate virus 12

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 8.29

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KGF4|A0A1L3KGF4_9VIRU Chropara_Vmeth domain-containing protein OS=Hubei odonate virus 12 OX=1922993 PE=4 SV=1
MM1 pKa = 7.54EE2 pKa = 5.49FDD4 pKa = 3.98EE5 pKa = 5.04VGISNAEE12 pKa = 4.14WIANWRR18 pKa = 11.84WVRR21 pKa = 11.84NKK23 pKa = 10.05VEE25 pKa = 4.15YY26 pKa = 11.14VFDD29 pKa = 4.57LDD31 pKa = 3.21KK32 pKa = 11.3HH33 pKa = 5.47RR34 pKa = 11.84AIAEE38 pKa = 4.09AEE40 pKa = 3.86AAEE43 pKa = 4.16ALRR46 pKa = 11.84LLAEE50 pKa = 4.31YY51 pKa = 10.58DD52 pKa = 3.72DD53 pKa = 5.03NSFGTHH59 pKa = 4.91YY60 pKa = 10.42RR61 pKa = 11.84QASRR65 pKa = 11.84LAKK68 pKa = 9.71QCAASAVTLKK78 pKa = 11.1DD79 pKa = 3.21KK80 pKa = 10.87TCDD83 pKa = 3.63FLYY86 pKa = 9.16KK87 pKa = 10.13TYY89 pKa = 10.54EE90 pKa = 4.15ALTAPPRR97 pKa = 11.84VVEE100 pKa = 3.89VLPWYY105 pKa = 10.36APSRR109 pKa = 11.84LARR112 pKa = 11.84SSLRR116 pKa = 11.84WCWQHH121 pKa = 7.33KK122 pKa = 9.99VILAGSVVASLIYY135 pKa = 10.14TGFYY139 pKa = 10.18LYY141 pKa = 10.68YY142 pKa = 10.34RR143 pKa = 11.84NAKK146 pKa = 7.97VVRR149 pKa = 11.84VDD151 pKa = 3.73SGDD154 pKa = 3.59SPFEE158 pKa = 4.17VNTLKK163 pKa = 10.87DD164 pKa = 3.0RR165 pKa = 11.84WEE167 pKa = 4.3LFSRR171 pKa = 11.84TYY173 pKa = 10.87NPPAYY178 pKa = 10.18HH179 pKa = 7.59PGRR182 pKa = 11.84HH183 pKa = 4.95MRR185 pKa = 11.84LAAEE189 pKa = 4.11RR190 pKa = 11.84RR191 pKa = 11.84HH192 pKa = 4.75VEE194 pKa = 3.91RR195 pKa = 11.84FIVDD199 pKa = 3.16IFVTHH204 pKa = 6.86RR205 pKa = 11.84MRR207 pKa = 11.84FRR209 pKa = 11.84DD210 pKa = 3.34VGGSRR215 pKa = 11.84NRR217 pKa = 11.84WVEE220 pKa = 3.79SSVYY224 pKa = 10.46KK225 pKa = 10.2HH226 pKa = 6.34LCFKK230 pKa = 10.32EE231 pKa = 4.29FSGFDD236 pKa = 2.84ILRR239 pKa = 11.84RR240 pKa = 11.84QKK242 pKa = 10.85RR243 pKa = 11.84PITPFEE249 pKa = 3.98EE250 pKa = 5.1CGQSGQDD257 pKa = 3.14CPQRR261 pKa = 11.84HH262 pKa = 6.31SIHH265 pKa = 6.32GAMLVDD271 pKa = 3.31VDD273 pKa = 5.01YY274 pKa = 11.92YY275 pKa = 10.86MSNDD279 pKa = 3.4DD280 pKa = 3.74LAEE283 pKa = 4.19VVTGPTFIVNHH294 pKa = 6.43DD295 pKa = 3.92FARR298 pKa = 11.84GRR300 pKa = 11.84QGEE303 pKa = 4.18LGEE306 pKa = 4.29EE307 pKa = 4.57GMVEE311 pKa = 4.11ARR313 pKa = 11.84WHH315 pKa = 6.23KK316 pKa = 10.93EE317 pKa = 3.21GDD319 pKa = 4.1CVVMTSEE326 pKa = 5.33DD327 pKa = 3.38GTPYY331 pKa = 9.26KK332 pKa = 10.53HH333 pKa = 7.08RR334 pKa = 11.84WHH336 pKa = 6.16TWSNEE341 pKa = 3.76GIVVGKK347 pKa = 10.18NGAFTYY353 pKa = 10.71VRR355 pKa = 11.84IGKK358 pKa = 8.89LRR360 pKa = 11.84TLQIYY365 pKa = 8.42YY366 pKa = 9.91AYY368 pKa = 8.46PASGVYY374 pKa = 9.99SGSDD378 pKa = 3.28SCNLTWGGPEE388 pKa = 3.98QIFCRR393 pKa = 11.84NHH395 pKa = 6.42AMDD398 pKa = 3.7VFRR401 pKa = 11.84RR402 pKa = 11.84LEE404 pKa = 4.2GEE406 pKa = 3.89EE407 pKa = 4.29EE408 pKa = 4.16IYY410 pKa = 10.87DD411 pKa = 3.5IVTPGGTVSITGRR424 pKa = 11.84VINQVVAQVANLEE437 pKa = 4.06RR438 pKa = 11.84DD439 pKa = 3.16NNYY442 pKa = 9.78YY443 pKa = 10.66SRR445 pKa = 11.84VRR447 pKa = 11.84AFTLSRR453 pKa = 11.84LIAEE457 pKa = 4.68GSDD460 pKa = 2.89RR461 pKa = 11.84SLVKK465 pKa = 9.92WVVEE469 pKa = 4.22VVMAMADD476 pKa = 3.32SFAYY480 pKa = 10.04EE481 pKa = 4.26LVRR484 pKa = 11.84HH485 pKa = 6.52CNTGMQPDD493 pKa = 4.09MLTVVDD499 pKa = 3.92HH500 pKa = 5.48TRR502 pKa = 11.84EE503 pKa = 3.76RR504 pKa = 11.84LRR506 pKa = 11.84RR507 pKa = 11.84TLITTLRR514 pKa = 11.84SFYY517 pKa = 10.56TSTWLEE523 pKa = 4.0GLCARR528 pKa = 11.84RR529 pKa = 11.84PIARR533 pKa = 11.84KK534 pKa = 7.29LTPWVFKK541 pKa = 10.13DD542 pKa = 2.98IRR544 pKa = 11.84MPTYY548 pKa = 10.19EE549 pKa = 4.35VYY551 pKa = 9.85TPPRR555 pKa = 11.84HH556 pKa = 6.04RR557 pKa = 11.84EE558 pKa = 3.5EE559 pKa = 4.37RR560 pKa = 11.84MPAAAEE566 pKa = 3.88NPFPVRR572 pKa = 11.84RR573 pKa = 11.84PPVNAGPDD581 pKa = 3.59EE582 pKa = 4.29RR583 pKa = 11.84RR584 pKa = 11.84GDD586 pKa = 4.26LPGQHH591 pKa = 5.16QRR593 pKa = 11.84QRR595 pKa = 11.84QRR597 pKa = 11.84EE598 pKa = 4.0RR599 pKa = 11.84GIEE602 pKa = 4.07GASTDD607 pKa = 3.2SGRR610 pKa = 11.84ASSADD615 pKa = 3.43SSSDD619 pKa = 4.74DD620 pKa = 4.17GDD622 pKa = 4.41SDD624 pKa = 5.79DD625 pKa = 5.9DD626 pKa = 4.35PLHH629 pKa = 7.11AIPPPPPPYY638 pKa = 9.85RR639 pKa = 11.84GPAGDD644 pKa = 5.1EE645 pKa = 3.72ITALIVPPPPSFARR659 pKa = 11.84AGSPEE664 pKa = 3.49HH665 pKa = 6.33HH666 pKa = 6.64RR667 pKa = 11.84PVEE670 pKa = 3.77NDD672 pKa = 2.49GRR674 pKa = 11.84PRR676 pKa = 11.84RR677 pKa = 11.84DD678 pKa = 2.96SGITRR683 pKa = 11.84SGDD686 pKa = 3.41SPTRR690 pKa = 11.84RR691 pKa = 11.84APRR694 pKa = 11.84GAGRR698 pKa = 11.84DD699 pKa = 3.71DD700 pKa = 4.55DD701 pKa = 5.14SGAEE705 pKa = 4.17TEE707 pKa = 4.25TSYY710 pKa = 9.78RR711 pKa = 11.84TASTTHH717 pKa = 7.57DD718 pKa = 4.26DD719 pKa = 3.76PLSDD723 pKa = 3.84VEE725 pKa = 4.97IVTHH729 pKa = 5.71PMRR732 pKa = 11.84LGAVRR737 pKa = 11.84GPRR740 pKa = 11.84VLLEE744 pKa = 4.5CGTKK748 pKa = 9.93RR749 pKa = 11.84GRR751 pKa = 11.84TILRR755 pKa = 11.84LHH757 pKa = 7.35DD758 pKa = 4.07SSQDD762 pKa = 3.43LHH764 pKa = 7.98SEE766 pKa = 4.29PPSTTLPRR774 pKa = 11.84RR775 pKa = 11.84PSRR778 pKa = 11.84AQLNEE783 pKa = 3.41VLEE786 pKa = 4.28RR787 pKa = 11.84VEE789 pKa = 4.3EE790 pKa = 4.57GVGRR794 pKa = 11.84PTNHH798 pKa = 5.89TPQRR802 pKa = 11.84AEE804 pKa = 3.63HH805 pKa = 6.69LFYY808 pKa = 10.19QTLRR812 pKa = 11.84NLGLLPTGQSPAQPRR827 pKa = 11.84RR828 pKa = 11.84GVPPNQRR835 pKa = 11.84DD836 pKa = 3.72GVVGGSEE843 pKa = 4.45RR844 pKa = 11.84ADD846 pKa = 3.5EE847 pKa = 4.29LPKK850 pKa = 10.19VDD852 pKa = 4.68KK853 pKa = 11.0ALSHH857 pKa = 6.8PPAGRR862 pKa = 11.84AGRR865 pKa = 11.84GTGRR869 pKa = 11.84GRR871 pKa = 11.84GPRR874 pKa = 11.84PGARR878 pKa = 11.84GRR880 pKa = 11.84KK881 pKa = 7.72NN882 pKa = 2.93

Molecular weight:
99.51 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KGF4|A0A1L3KGF4_9VIRU Chropara_Vmeth domain-containing protein OS=Hubei odonate virus 12 OX=1922993 PE=4 SV=1
MM1 pKa = 7.93RR2 pKa = 11.84CTLPPVTGRR11 pKa = 11.84SACRR15 pKa = 11.84QLLRR19 pKa = 11.84THH21 pKa = 6.42FQCGARR27 pKa = 11.84QLMPALTSAEE37 pKa = 4.11VTFPANTRR45 pKa = 11.84DD46 pKa = 3.58NASASVALRR55 pKa = 11.84VLRR58 pKa = 11.84PTLAVHH64 pKa = 6.99PLLTVPPMTGTAMMIRR80 pKa = 11.84CMPSPPPPHH89 pKa = 7.58LIEE92 pKa = 4.94DD93 pKa = 3.85QPGTRR98 pKa = 11.84SQHH101 pKa = 5.32LSSRR105 pKa = 11.84HH106 pKa = 5.68HH107 pKa = 6.8PPSPALGVRR116 pKa = 11.84NTTDD120 pKa = 3.37QLRR123 pKa = 11.84MMGVRR128 pKa = 11.84VEE130 pKa = 4.39TVEE133 pKa = 4.1SLEE136 pKa = 4.17AGIARR141 pKa = 11.84LDD143 pKa = 3.51VLRR146 pKa = 11.84EE147 pKa = 3.96EE148 pKa = 4.67LEE150 pKa = 4.16GMTTAGRR157 pKa = 11.84RR158 pKa = 11.84RR159 pKa = 11.84KK160 pKa = 10.06RR161 pKa = 11.84PTALLVPPMTIPYY174 pKa = 7.18RR175 pKa = 11.84TSRR178 pKa = 11.84SSRR181 pKa = 11.84IRR183 pKa = 11.84CDD185 pKa = 3.23LAPFADD191 pKa = 5.71PEE193 pKa = 4.68SCWNVEE199 pKa = 4.11PNGDD203 pKa = 4.12GPYY206 pKa = 10.12SDD208 pKa = 3.96CTIVRR213 pKa = 11.84KK214 pKa = 9.97IYY216 pKa = 9.41TRR218 pKa = 11.84SRR220 pKa = 11.84RR221 pKa = 11.84QQPFQDD227 pKa = 3.75VQVVPSSTKK236 pKa = 9.8CWRR239 pKa = 11.84EE240 pKa = 3.59WKK242 pKa = 10.45KK243 pKa = 10.97EE244 pKa = 3.79WGDD247 pKa = 3.75LPTIPHH253 pKa = 6.29SEE255 pKa = 3.81QSICFTKK262 pKa = 10.48RR263 pKa = 11.84SVISACSRR271 pKa = 11.84RR272 pKa = 11.84DD273 pKa = 3.29SPLRR277 pKa = 11.84NLVAEE282 pKa = 4.48FLQTKK287 pKa = 8.23EE288 pKa = 4.21MEE290 pKa = 3.95WLEE293 pKa = 4.15AVSEE297 pKa = 4.08PMNFQRR303 pKa = 11.84WIKK306 pKa = 9.95RR307 pKa = 11.84YY308 pKa = 7.8PIHH311 pKa = 7.1RR312 pKa = 11.84RR313 pKa = 11.84VEE315 pKa = 4.05LEE317 pKa = 3.61EE318 pKa = 4.31ARR320 pKa = 11.84AEE322 pKa = 4.15VEE324 pKa = 3.84ARR326 pKa = 11.84GLEE329 pKa = 4.06RR330 pKa = 11.84GDD332 pKa = 4.1AKK334 pKa = 10.48ISCFIKK340 pKa = 10.57RR341 pKa = 11.84EE342 pKa = 4.22ATVKK346 pKa = 10.52RR347 pKa = 11.84VDD349 pKa = 3.74PRR351 pKa = 11.84NISPRR356 pKa = 11.84TDD358 pKa = 2.84QFLATLGPYY367 pKa = 8.75IAAMEE372 pKa = 4.44AKK374 pKa = 9.99ACRR377 pKa = 11.84APFMVKK383 pKa = 9.13GHH385 pKa = 6.1NLRR388 pKa = 11.84GIQRR392 pKa = 11.84KK393 pKa = 9.39LGWLADD399 pKa = 3.63YY400 pKa = 10.7QSYY403 pKa = 10.28VEE405 pKa = 4.14VDD407 pKa = 4.14FSRR410 pKa = 11.84FDD412 pKa = 3.32MTLTRR417 pKa = 11.84HH418 pKa = 5.37ILEE421 pKa = 4.2IVEE424 pKa = 3.95NTMLTKK430 pKa = 10.67AFPKK434 pKa = 9.76EE435 pKa = 3.93LHH437 pKa = 6.75PEE439 pKa = 3.66LHH441 pKa = 6.57IALKK445 pKa = 10.23LARR448 pKa = 11.84SPAGRR453 pKa = 11.84YY454 pKa = 8.71RR455 pKa = 11.84CGVSYY460 pKa = 9.49STEE463 pKa = 3.89GTRR466 pKa = 11.84CSGDD470 pKa = 2.75AHH472 pKa = 6.1TSFGNTLLNRR482 pKa = 11.84FFTWLCLRR490 pKa = 11.84KK491 pKa = 9.79LPSSSWRR498 pKa = 11.84SVHH501 pKa = 6.6EE502 pKa = 4.52GDD504 pKa = 5.04DD505 pKa = 3.59GLIAVSSRR513 pKa = 11.84WVNQVLYY520 pKa = 10.61NLSCLGCLGLEE531 pKa = 4.44PKK533 pKa = 10.76LKK535 pKa = 9.81VTDD538 pKa = 4.07NLHH541 pKa = 6.05EE542 pKa = 4.14ATFCGRR548 pKa = 11.84NFHH551 pKa = 6.29STTDD555 pKa = 4.49GIISTCDD562 pKa = 3.06VPRR565 pKa = 11.84ALQKK569 pKa = 10.94YY570 pKa = 7.02HH571 pKa = 5.84TTTSDD576 pKa = 3.23GKK578 pKa = 10.02PDD580 pKa = 3.37ILLLCKK586 pKa = 10.19SVSYY590 pKa = 10.27LYY592 pKa = 10.98SDD594 pKa = 3.38GHH596 pKa = 5.53TPGVGLLASSLVQILIKK613 pKa = 10.33RR614 pKa = 11.84VQCQKK619 pKa = 10.36QFEE622 pKa = 4.58KK623 pKa = 10.56TMHH626 pKa = 6.26RR627 pKa = 11.84VLKK630 pKa = 9.82EE631 pKa = 3.65RR632 pKa = 11.84YY633 pKa = 9.04AADD636 pKa = 3.31VLIGKK641 pKa = 8.86KK642 pKa = 9.96NKK644 pKa = 10.03YY645 pKa = 10.37FMGDD649 pKa = 3.18VLEE652 pKa = 5.25KK653 pKa = 10.78ARR655 pKa = 11.84AWDD658 pKa = 3.63PRR660 pKa = 11.84MVSPTVEE667 pKa = 3.81ANVAHH672 pKa = 6.9TYY674 pKa = 9.99GIPLQPFLRR683 pKa = 11.84SVSQFSSWVKK693 pKa = 10.23FGHH696 pKa = 5.82VPAEE700 pKa = 4.17VEE702 pKa = 4.31VLQLEE707 pKa = 4.4TLEE710 pKa = 5.08DD711 pKa = 3.47KK712 pKa = 11.17AGTVVYY718 pKa = 8.9TT719 pKa = 4.03

Molecular weight:
81.21 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1601

719

882

800.5

90.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.183 ± 0.22

2.061 ± 0.515

5.309 ± 0.681

6.371 ± 0.234

3.061 ± 0.083

6.746 ± 0.874

3.123 ± 0.121

3.623 ± 0.163

3.498 ± 0.654

7.995 ± 1.042

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.124 ± 0.311

2.811 ± 0.184

7.121 ± 0.183

3.061 ± 0.249

10.369 ± 0.795

6.996 ± 0.308

6.496 ± 0.441

7.37 ± 0.083

1.686 ± 0.01

2.998 ± 0.379

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski