Enterococcus asini ATCC 700915
Average proteome isoelectric point is 6.08
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2389 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|R2PXA6|R2PXA6_9ENTE Uncharacterized protein OS=Enterococcus asini ATCC 700915 OX=1158606 GN=UAS_00631 PE=4 SV=1
MM1 pKa = 7.44 KK2 pKa = 10.09 LIKK5 pKa = 10.47 SILFGTAVLAGVAAFGSQSDD25 pKa = 3.6 AAEE28 pKa = 4.22 IEE30 pKa = 4.42 HH31 pKa = 6.43 TVTSSDD37 pKa = 4.0 TLWGLSMKK45 pKa = 10.72 YY46 pKa = 10.17 YY47 pKa = 10.93 GSDD50 pKa = 4.37 DD51 pKa = 4.24 YY52 pKa = 11.53 IQTIANDD59 pKa = 3.79 NNIEE63 pKa = 4.11 NADD66 pKa = 3.89 MIYY69 pKa = 10.68 DD70 pKa = 4.03 GEE72 pKa = 4.31 VLKK75 pKa = 11.01 INTDD79 pKa = 3.36 SPAATAAQTEE89 pKa = 4.58 TPKK92 pKa = 10.92 AVAEE96 pKa = 4.5 TTTEE100 pKa = 3.8 AAPAEE105 pKa = 4.17 TSEE108 pKa = 4.31 PVTTTTEE115 pKa = 3.73 EE116 pKa = 3.96 ANYY119 pKa = 10.58 SGTTMYY125 pKa = 10.07 MEE127 pKa = 4.56 ATAYY131 pKa = 10.85 SSDD134 pKa = 3.62 PADD137 pKa = 3.65 ALGGGTVTATGQNLLEE153 pKa = 4.5 NPMAVAVDD161 pKa = 3.82 PSVIPLGTHH170 pKa = 7.02 LYY172 pKa = 9.73 VEE174 pKa = 5.63 GYY176 pKa = 10.01 GEE178 pKa = 4.76 AYY180 pKa = 10.25 AVDD183 pKa = 3.91 TGSAIQGNIIDD194 pKa = 4.06 VHH196 pKa = 6.01 FSSYY200 pKa = 9.73 DD201 pKa = 3.16 QCVAWGRR208 pKa = 11.84 RR209 pKa = 11.84 QVKK212 pKa = 7.72 VTILDD217 pKa = 3.46
Molecular weight: 22.84 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.794
IPC2_protein 3.91
IPC_protein 3.884
Toseland 3.681
ProMoST 3.986
Dawson 3.859
Bjellqvist 4.05
Wikipedia 3.77
Rodwell 3.719
Grimsley 3.592
Solomon 3.846
Lehninger 3.808
Nozaki 3.973
DTASelect 4.164
Thurlkill 3.732
EMBOSS 3.783
Sillero 3.999
Patrickios 0.604
IPC_peptide 3.846
IPC2_peptide 3.986
IPC2.peptide.svr19 3.91
Protein with the highest isoelectric point:
>tr|R2S995|R2S995_9ENTE 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase OS=Enterococcus asini ATCC 700915 OX=1158606 GN=UAS_00520 PE=4 SV=1
MM1 pKa = 7.35 KK2 pKa = 9.42 RR3 pKa = 11.84 TYY5 pKa = 10.34 QPNKK9 pKa = 9.16 RR10 pKa = 11.84 KK11 pKa = 9.12 RR12 pKa = 11.84 QKK14 pKa = 9.38 VHH16 pKa = 5.8 GFRR19 pKa = 11.84 KK20 pKa = 10.04 RR21 pKa = 11.84 MSTKK25 pKa = 9.54 NGRR28 pKa = 11.84 RR29 pKa = 11.84 VIAARR34 pKa = 11.84 RR35 pKa = 11.84 RR36 pKa = 11.84 KK37 pKa = 8.85 GRR39 pKa = 11.84 KK40 pKa = 8.75 VLAAA44 pKa = 4.31
Molecular weight: 5.32 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.434
IPC2_protein 11.14
IPC_protein 12.501
Toseland 12.661
ProMoST 13.159
Dawson 12.661
Bjellqvist 12.661
Wikipedia 13.144
Rodwell 12.427
Grimsley 12.705
Solomon 13.159
Lehninger 13.056
Nozaki 12.661
DTASelect 12.661
Thurlkill 12.661
EMBOSS 13.159
Sillero 12.661
Patrickios 12.149
IPC_peptide 13.159
IPC2_peptide 12.149
IPC2.peptide.svr19 9.052
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2389
0
2389
736464
22
1672
308.3
34.41
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.297 ± 0.058
0.683 ± 0.015
5.376 ± 0.058
7.2 ± 0.049
4.452 ± 0.04
7.03 ± 0.048
1.861 ± 0.019
6.568 ± 0.044
6.112 ± 0.039
10.335 ± 0.063
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.593 ± 0.024
3.982 ± 0.034
3.781 ± 0.028
4.594 ± 0.049
4.142 ± 0.039
5.459 ± 0.044
5.837 ± 0.037
7.097 ± 0.038
0.992 ± 0.016
3.609 ± 0.031
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here