Abalone herpesvirus (isolate Abalone/Australia/Victoria/2009) (AbHV)

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Malacoherpesviridae; Aurivirus; Haliotid herpesvirus 1

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 112 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K4JUE5|K4JUE5_ABHV Uncharacterized protein OS=Abalone herpesvirus (isolate Abalone/Australia/Victoria/2009) OX=1241371 GN=AbHV_ORF19 PE=4 SV=1
MM1 pKa = 8.12DD2 pKa = 5.86DD3 pKa = 4.46KK4 pKa = 11.63SSGMQAAALATEE16 pKa = 4.94DD17 pKa = 5.05DD18 pKa = 4.21DD19 pKa = 6.99DD20 pKa = 4.74GVSSLVDD27 pKa = 3.94MINSGALSLEE37 pKa = 4.52VEE39 pKa = 4.34RR40 pKa = 11.84QMKK43 pKa = 10.21RR44 pKa = 11.84DD45 pKa = 3.42GEE47 pKa = 4.38RR48 pKa = 11.84NLLFYY53 pKa = 10.89QEE55 pKa = 4.14VMSATFDD62 pKa = 3.83RR63 pKa = 11.84DD64 pKa = 3.32LLRR67 pKa = 11.84SKK69 pKa = 10.41IFPEE73 pKa = 4.49DD74 pKa = 3.58ASKK77 pKa = 10.65GPCMRR82 pKa = 11.84MKK84 pKa = 10.47QSLYY88 pKa = 10.81KK89 pKa = 9.99EE90 pKa = 3.82ASKK93 pKa = 10.64PIVGEE98 pKa = 4.0YY99 pKa = 10.57AFEE102 pKa = 4.47SDD104 pKa = 4.25PVFSSASTAHH114 pKa = 6.12LRR116 pKa = 11.84LVEE119 pKa = 3.96KK120 pKa = 10.85SKK122 pKa = 10.73ILSKK126 pKa = 10.54DD127 pKa = 2.77IPEE130 pKa = 4.22IVLDD134 pKa = 4.04YY135 pKa = 11.11NQDD138 pKa = 3.35PSVISVDD145 pKa = 3.59EE146 pKa = 4.44SNMIVTDD153 pKa = 3.16VHH155 pKa = 6.87HH156 pKa = 6.42PQEE159 pKa = 4.11NQTRR163 pKa = 11.84IFFQLDD169 pKa = 2.9NGYY172 pKa = 9.6VLSIPTVNPWSEE184 pKa = 3.69RR185 pKa = 11.84IYY187 pKa = 10.32RR188 pKa = 11.84YY189 pKa = 8.64TITSVPQDD197 pKa = 3.66KK198 pKa = 10.65EE199 pKa = 3.93LLVYY203 pKa = 10.92DD204 pKa = 3.9NLEE207 pKa = 4.24DD208 pKa = 4.06VFKK211 pKa = 10.96NYY213 pKa = 10.06PNYY216 pKa = 10.56AEE218 pKa = 4.95KK219 pKa = 10.96LFTNAPDD226 pKa = 5.4DD227 pKa = 5.31DD228 pKa = 6.56DD229 pKa = 6.93DD230 pKa = 6.33DD231 pKa = 5.21EE232 pKa = 5.37EE233 pKa = 5.64GGPEE237 pKa = 4.1QYY239 pKa = 11.09LKK241 pKa = 10.85LDD243 pKa = 3.5RR244 pKa = 11.84SFLGVSGVSDD254 pKa = 3.89GSDD257 pKa = 3.36LEE259 pKa = 4.68VVARR263 pKa = 11.84YY264 pKa = 8.45HH265 pKa = 7.5IPMEE269 pKa = 4.61LNPLQYY275 pKa = 11.29VMHH278 pKa = 6.97KK279 pKa = 10.01PNLYY283 pKa = 10.53LFTGKK288 pKa = 9.97DD289 pKa = 3.22QEE291 pKa = 4.6GNNNCLYY298 pKa = 11.01ALNTEE303 pKa = 4.24LVEE306 pKa = 4.73GEE308 pKa = 4.38GKK310 pKa = 9.59PWIAPWTKK318 pKa = 10.14VKK320 pKa = 10.32IYY322 pKa = 10.65DD323 pKa = 3.47SEE325 pKa = 4.95TYY327 pKa = 10.94VDD329 pKa = 4.01LTDD332 pKa = 4.72PNTLTVFEE340 pKa = 5.44DD341 pKa = 3.93EE342 pKa = 4.55VPSYY346 pKa = 11.06RR347 pKa = 11.84LTIEE351 pKa = 3.76VSEE354 pKa = 4.29GSNIGVLSVPDD365 pKa = 3.91YY366 pKa = 7.96PTYY369 pKa = 10.46DD370 pKa = 3.41IPSLTLIEE378 pKa = 4.23EE379 pKa = 4.29VNDD382 pKa = 3.5IVLEE386 pKa = 4.16AAEE389 pKa = 4.64EE390 pKa = 4.07EE391 pKa = 4.35DD392 pKa = 6.18DD393 pKa = 4.39EE394 pKa = 5.26DD395 pKa = 4.15

Molecular weight: 44.68 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K4JYI3|K4JYI3_ABHV Uncharacterized protein OS=Abalone herpesvirus (isolate Abalone/Australia/Victoria/2009) OX=1241371 GN=AbHV_ORF66 PE=4 SV=1
MM1 pKa = 7.47KK2 pKa = 10.29FVTRR6 pKa = 11.84KK7 pKa = 10.0RR8 pKa = 11.84LVTKK12 pKa = 10.14MLLTHH17 pKa = 6.76KK18 pKa = 10.07FKK20 pKa = 11.12LVTRR24 pKa = 11.84TGLATKK30 pKa = 10.11KK31 pKa = 10.61YY32 pKa = 10.1LALKK36 pKa = 10.12MNDD39 pKa = 2.99TWGKK43 pKa = 10.09DD44 pKa = 3.15ALSRR48 pKa = 11.84AEE50 pKa = 3.61INYY53 pKa = 9.61VNEE56 pKa = 3.57NDD58 pKa = 3.5TWGKK62 pKa = 9.24NAPTLQKK69 pKa = 10.41NLRR72 pKa = 11.84SAVFLVPTSIVHH84 pKa = 5.75AQHH87 pKa = 6.46PQRR90 pKa = 11.84KK91 pKa = 7.15RR92 pKa = 11.84TEE94 pKa = 3.71ARR96 pKa = 11.84LPPSLNLQRR105 pKa = 11.84TLTDD109 pKa = 2.82SKK111 pKa = 10.3MYY113 pKa = 9.94PSLKK117 pKa = 9.78IILRR121 pKa = 11.84RR122 pKa = 11.84KK123 pKa = 8.31RR124 pKa = 11.84TVATLLPSLKK134 pKa = 10.12KK135 pKa = 10.51KK136 pKa = 10.21LWSGLCWTT144 pKa = 5.04

Molecular weight: 16.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

112

0

112

56122

79

1926

501.1

57.0

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.7 ± 0.13

1.937 ± 0.118

5.928 ± 0.13

8.025 ± 0.247

4.321 ± 0.095

4.994 ± 0.12

1.994 ± 0.101

5.675 ± 0.126

7.658 ± 0.196

8.269 ± 0.195

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.067 ± 0.096

5.023 ± 0.119

4.572 ± 0.18

3.304 ± 0.09

5.399 ± 0.168

6.976 ± 0.15

5.958 ± 0.144

6.971 ± 0.1

0.798 ± 0.043

3.43 ± 0.146
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski