Torque teno tamarin virus (isolate So-TTV2)

Taxonomy: Viruses; Anelloviridae; Epsilontorquevirus; Torque teno tamarin virus

Average proteome isoelectric point is 7.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q9DUC2|ORF2_TTVE1 Uncharacterized ORF2 protein OS=Torque teno tamarin virus (isolate So-TTV2) OX=766186 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.29QRR3 pKa = 11.84RR4 pKa = 11.84TQEE7 pKa = 4.62LIWKK11 pKa = 8.36EE12 pKa = 3.83LVDD15 pKa = 3.81NSHH18 pKa = 7.26KK19 pKa = 10.77LFCNCMDD26 pKa = 4.01PQNHH30 pKa = 5.59YY31 pKa = 11.05RR32 pKa = 11.84LICQNLNRR40 pKa = 11.84EE41 pKa = 4.19PGEE44 pKa = 3.8PWRR47 pKa = 11.84TAGGIGEE54 pKa = 4.63GGAGGDD60 pKa = 3.54GAAAGGEE67 pKa = 4.29GDD69 pKa = 3.77VHH71 pKa = 6.12GRR73 pKa = 11.84PAGAEE78 pKa = 3.99DD79 pKa = 4.72GEE81 pKa = 5.3DD82 pKa = 3.66GADD85 pKa = 3.23AAMAAALAAFEE96 pKa = 4.87DD97 pKa = 4.23ATGG100 pKa = 3.26

Molecular weight: 10.42 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q9DUC2|ORF2_TTVE1 Uncharacterized ORF2 protein OS=Torque teno tamarin virus (isolate So-TTV2) OX=766186 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.89AYY3 pKa = 9.97GRR5 pKa = 11.84RR6 pKa = 11.84YY7 pKa = 6.99WRR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84WRR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84GGRR19 pKa = 11.84WWRR22 pKa = 11.84RR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84PWKK28 pKa = 8.65TRR30 pKa = 11.84WRR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84WRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84RR42 pKa = 11.84YY43 pKa = 8.87GRR45 pKa = 11.84RR46 pKa = 11.84ARR48 pKa = 11.84RR49 pKa = 11.84FRR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84HH54 pKa = 4.67RR55 pKa = 11.84VGRR58 pKa = 11.84WRR60 pKa = 11.84KK61 pKa = 8.63LFRR64 pKa = 11.84RR65 pKa = 11.84VKK67 pKa = 10.42SRR69 pKa = 11.84VVRR72 pKa = 11.84QWDD75 pKa = 3.5PNVTRR80 pKa = 11.84RR81 pKa = 11.84CMINGYY87 pKa = 9.56DD88 pKa = 3.59HH89 pKa = 7.21ALFWGQQAQHH99 pKa = 6.95RR100 pKa = 11.84ILYY103 pKa = 10.26DD104 pKa = 3.46NLPWPIKK111 pKa = 10.56KK112 pKa = 10.25EE113 pKa = 4.01GTQEE117 pKa = 4.05GGSMNMMQLTLQFLYY132 pKa = 10.67KK133 pKa = 10.75DD134 pKa = 3.51NLAGRR139 pKa = 11.84NRR141 pKa = 11.84WTRR144 pKa = 11.84SNWDD148 pKa = 3.03MDD150 pKa = 3.79LAKK153 pKa = 10.78YY154 pKa = 10.56HH155 pKa = 5.9EE156 pKa = 4.56TTLLFPRR163 pKa = 11.84HH164 pKa = 5.88RR165 pKa = 11.84NYY167 pKa = 11.02SYY169 pKa = 11.46VVFITRR175 pKa = 11.84GPNDD179 pKa = 3.4ILDD182 pKa = 3.54EE183 pKa = 4.09HH184 pKa = 6.88TYY186 pKa = 10.65PGLHH190 pKa = 6.53PEE192 pKa = 3.96KK193 pKa = 10.23MLGRR197 pKa = 11.84RR198 pKa = 11.84KK199 pKa = 10.29KK200 pKa = 9.95IVVWSKK206 pKa = 10.68DD207 pKa = 3.48LRR209 pKa = 11.84PHH211 pKa = 6.03GKK213 pKa = 8.75NYY215 pKa = 9.64IRR217 pKa = 11.84VRR219 pKa = 11.84VPPPQVFKK227 pKa = 10.84NQWYY231 pKa = 7.66FQRR234 pKa = 11.84DD235 pKa = 3.33ICQMPILTLGFAAFDD250 pKa = 3.93PVNVTLAGNMANSSIILWGIPYY272 pKa = 9.5WSRR275 pKa = 11.84PMPYY279 pKa = 8.55NTWYY283 pKa = 10.23DD284 pKa = 3.54YY285 pKa = 7.61WTKK288 pKa = 10.7CAGPQNIPWSDD299 pKa = 3.22RR300 pKa = 11.84QTNIAAGITQKK311 pKa = 10.73SAQTCLKK318 pKa = 10.32LKK320 pKa = 10.2NKK322 pKa = 10.0HH323 pKa = 6.3FGLTNTAIVSDD334 pKa = 4.09YY335 pKa = 11.64DD336 pKa = 4.16KK337 pKa = 11.8DD338 pKa = 4.79NIDD341 pKa = 4.61KK342 pKa = 8.75NTKK345 pKa = 8.41QIKK348 pKa = 8.14TIVMSLNRR356 pKa = 11.84WYY358 pKa = 9.95PKK360 pKa = 10.34WPMKK364 pKa = 10.15WKK366 pKa = 10.38DD367 pKa = 3.21AGDD370 pKa = 3.87INTQTPFPYY379 pKa = 9.62RR380 pKa = 11.84YY381 pKa = 9.37SWRR384 pKa = 11.84EE385 pKa = 3.58DD386 pKa = 3.27QGWGNKK392 pKa = 6.97VRR394 pKa = 11.84LWTRR398 pKa = 11.84EE399 pKa = 3.69CRR401 pKa = 11.84TDD403 pKa = 3.36IPEE406 pKa = 4.01EE407 pKa = 3.84TLGIEE412 pKa = 4.19NMPLYY417 pKa = 11.12VLMNGYY423 pKa = 9.4IDD425 pKa = 4.31YY426 pKa = 8.66VTNHH430 pKa = 5.52STHH433 pKa = 6.59SPLNWVVSVFCPYY446 pKa = 10.16TDD448 pKa = 3.69PPMTNVIPVGKK459 pKa = 9.79DD460 pKa = 2.65WFIQNVEE467 pKa = 4.11PGEE470 pKa = 4.05NKK472 pKa = 10.25YY473 pKa = 10.83PSDD476 pKa = 3.59NADD479 pKa = 3.07NTFAPGEE486 pKa = 3.99KK487 pKa = 9.43TKK489 pKa = 10.62IKK491 pKa = 10.73NYY493 pKa = 10.24DD494 pKa = 3.23SSKK497 pKa = 11.51DD498 pKa = 3.51EE499 pKa = 3.86FTGNVIRR506 pKa = 11.84APDD509 pKa = 3.68VYY511 pKa = 11.17DD512 pKa = 4.13SLPAQQALYY521 pKa = 9.65IASPFSLKK529 pKa = 9.23WAQTTGSIVFFYY541 pKa = 10.06QSKK544 pKa = 7.01WTWGGDD550 pKa = 3.79FPRR553 pKa = 11.84QRR555 pKa = 11.84PIIDD559 pKa = 3.41PCNRR563 pKa = 11.84PKK565 pKa = 10.41WGGLPVTGYY574 pKa = 11.11DD575 pKa = 3.38EE576 pKa = 5.02TGLLLQNPEE585 pKa = 3.92KK586 pKa = 11.11AEE588 pKa = 3.77ARR590 pKa = 11.84ARR592 pKa = 11.84GHH594 pKa = 7.04LGDD597 pKa = 4.78LRR599 pKa = 11.84RR600 pKa = 11.84GDD602 pKa = 3.74LTKK605 pKa = 10.22TALKK609 pKa = 10.51RR610 pKa = 11.84LMEE613 pKa = 4.17LTSTEE618 pKa = 3.92EE619 pKa = 4.2GSPQKK624 pKa = 10.45KK625 pKa = 9.23KK626 pKa = 10.76RR627 pKa = 11.84RR628 pKa = 11.84DD629 pKa = 3.27KK630 pKa = 10.8EE631 pKa = 3.99VRR633 pKa = 11.84TTADD637 pKa = 3.43LLRR640 pKa = 11.84PEE642 pKa = 6.0DD643 pKa = 4.21VYY645 pKa = 11.76CWMSPTPEE653 pKa = 4.18TPPKK657 pKa = 10.29AGKK660 pKa = 8.13TPEE663 pKa = 3.82SSFAEE668 pKa = 4.67TYY670 pKa = 10.91DD671 pKa = 3.41NHH673 pKa = 6.02TKK675 pKa = 10.03LAKK678 pKa = 9.58RR679 pKa = 11.84VKK681 pKa = 10.61KK682 pKa = 10.17EE683 pKa = 3.16IHH685 pKa = 5.25NQNRR689 pKa = 11.84RR690 pKa = 11.84HH691 pKa = 6.04RR692 pKa = 11.84LLLAHH697 pKa = 7.2LRR699 pKa = 11.84RR700 pKa = 11.84EE701 pKa = 3.92RR702 pKa = 11.84DD703 pKa = 3.22RR704 pKa = 11.84LLGHH708 pKa = 6.66HH709 pKa = 7.0LLRR712 pKa = 6.03

Molecular weight: 84.93 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1041

70

712

260.3

30.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.572 ± 2.285

1.345 ± 0.392

5.86 ± 0.48

4.803 ± 1.394

2.498 ± 0.739

6.82 ± 2.189

2.498 ± 0.441

3.554 ± 1.147

6.34 ± 1.154

6.82 ± 0.606

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.209 ± 0.433

4.803 ± 1.07

7.493 ± 1.303

3.65 ± 0.311

11.72 ± 2.387

4.899 ± 1.643

7.685 ± 1.835

3.362 ± 1.392

4.227 ± 0.999

3.842 ± 0.992
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski