Hibiscus latent Fort Pierce virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus

Average proteome isoelectric point is 6.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A097ZNB1|A0A097ZNB1_9VIRU 31 kDa movement protein OS=Hibiscus latent Fort Pierce virus OX=233051 PE=4 SV=1
MM1 pKa = 7.57SYY3 pKa = 11.7SNITALNLIYY13 pKa = 10.45SSPTFAPYY21 pKa = 10.45DD22 pKa = 3.59VLLEE26 pKa = 3.86ILIKK30 pKa = 10.67SRR32 pKa = 11.84SNSFQTQAGRR42 pKa = 11.84DD43 pKa = 3.44ILRR46 pKa = 11.84EE47 pKa = 3.79QLVNALQIVVTPTTRR62 pKa = 11.84FPADD66 pKa = 2.77RR67 pKa = 11.84WYY69 pKa = 10.26VWSRR73 pKa = 11.84NPTLGPVFEE82 pKa = 5.67ALLQATDD89 pKa = 3.35TKK91 pKa = 11.33NRR93 pKa = 11.84IIEE96 pKa = 4.26TEE98 pKa = 3.84EE99 pKa = 3.89DD100 pKa = 3.67SRR102 pKa = 11.84PTTAEE107 pKa = 3.93TLNATQRR114 pKa = 11.84VDD116 pKa = 3.35DD117 pKa = 4.06ATVAIHH123 pKa = 7.12KK124 pKa = 9.93EE125 pKa = 3.3IDD127 pKa = 3.73NILGLLQGGTAVYY140 pKa = 9.81NQASFEE146 pKa = 4.19IASGWTWTAPANN158 pKa = 3.7

Molecular weight: 17.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B6E277|B6E277_9VIRU 128 kDa replicase OS=Hibiscus latent Fort Pierce virus OX=233051 PE=4 SV=1
MM1 pKa = 6.62TTSTTDD7 pKa = 2.67IKK9 pKa = 10.91QQITNVRR16 pKa = 11.84DD17 pKa = 3.73DD18 pKa = 4.12AAHH21 pKa = 6.6GAASLIKK28 pKa = 10.28GLATRR33 pKa = 11.84RR34 pKa = 11.84VYY36 pKa = 11.08DD37 pKa = 3.58EE38 pKa = 4.64AVNTLTLLDD47 pKa = 4.25KK48 pKa = 10.73RR49 pKa = 11.84PKK51 pKa = 10.21FSFSNLVSTEE61 pKa = 3.67NAKK64 pKa = 9.42MVTEE68 pKa = 5.5AYY70 pKa = 9.73PEE72 pKa = 4.04FNISFVGNRR81 pKa = 11.84NTVHH85 pKa = 6.58SLAGGLRR92 pKa = 11.84KK93 pKa = 9.93LEE95 pKa = 4.02MEE97 pKa = 4.48YY98 pKa = 11.29LMTLVPYY105 pKa = 10.68GSATFDD111 pKa = 2.71IGGNYY116 pKa = 8.98AQHH119 pKa = 6.51LLKK122 pKa = 10.75GRR124 pKa = 11.84AYY126 pKa = 8.8VHH128 pKa = 6.65CCNPCLDD135 pKa = 3.98FRR137 pKa = 11.84DD138 pKa = 3.57IARR141 pKa = 11.84NEE143 pKa = 4.27SYY145 pKa = 11.08KK146 pKa = 10.53DD147 pKa = 3.53TVDD150 pKa = 3.8SYY152 pKa = 11.66LKK154 pKa = 10.69RR155 pKa = 11.84FTTPDD160 pKa = 3.61CGWFSGAVRR169 pKa = 11.84AITARR174 pKa = 11.84PLPSFQKK181 pKa = 10.5EE182 pKa = 3.52AFEE185 pKa = 5.24RR186 pKa = 11.84YY187 pKa = 8.8RR188 pKa = 11.84QVPSDD193 pKa = 3.86VTCSQPFQDD202 pKa = 4.24CAMRR206 pKa = 11.84TPPNQDD212 pKa = 2.69CFAISVHH219 pKa = 5.68SLYY222 pKa = 10.65DD223 pKa = 3.34IPVDD227 pKa = 3.75EE228 pKa = 5.53LGCALLRR235 pKa = 11.84KK236 pKa = 9.07NVKK239 pKa = 9.15ILYY242 pKa = 9.05AALHH246 pKa = 5.77FSEE249 pKa = 5.72DD250 pKa = 3.8LLLGATDD257 pKa = 4.19APLGNIGARR266 pKa = 11.84FYY268 pKa = 11.36RR269 pKa = 11.84NGDD272 pKa = 3.24EE273 pKa = 4.23VTFGFDD279 pKa = 3.67GEE281 pKa = 4.6STLLYY286 pKa = 9.15THH288 pKa = 6.46SFKK291 pKa = 11.15NICGYY296 pKa = 7.53ITRR299 pKa = 11.84SFFYY303 pKa = 10.6AGAKK307 pKa = 7.48YY308 pKa = 10.44AYY310 pKa = 9.09MKK312 pKa = 10.55EE313 pKa = 4.12FMVKK317 pKa = 10.01RR318 pKa = 11.84VDD320 pKa = 3.44TVFCKK325 pKa = 10.42FVRR328 pKa = 11.84IDD330 pKa = 3.49TQCLYY335 pKa = 11.03KK336 pKa = 10.61SVFHH340 pKa = 5.82TQIDD344 pKa = 3.6SDD346 pKa = 4.19AVLEE350 pKa = 4.53GMDD353 pKa = 3.48SAFTARR359 pKa = 11.84RR360 pKa = 11.84QAAMLNAARR369 pKa = 11.84PLFKK373 pKa = 10.72DD374 pKa = 3.17KK375 pKa = 11.17AAFSVWFPNAIGKK388 pKa = 8.43VLIPIFRR395 pKa = 11.84GTTCLGAKK403 pKa = 9.55IKK405 pKa = 9.64MEE407 pKa = 3.89KK408 pKa = 10.27RR409 pKa = 11.84LVDD412 pKa = 3.45EE413 pKa = 4.89DD414 pKa = 3.97FVYY417 pKa = 10.39TILNHH422 pKa = 5.29IRR424 pKa = 11.84TYY426 pKa = 9.69TGKK429 pKa = 9.52QLSYY433 pKa = 10.83EE434 pKa = 4.14NVLSFVEE441 pKa = 4.76SIRR444 pKa = 11.84SRR446 pKa = 11.84VVINGANVRR455 pKa = 11.84SEE457 pKa = 3.84WNIPKK462 pKa = 10.14SDD464 pKa = 3.44IQDD467 pKa = 2.98IAMSLFLITKK477 pKa = 9.88LRR479 pKa = 11.84TLQDD483 pKa = 3.56SAVLSHH489 pKa = 7.2FDD491 pKa = 3.13IKK493 pKa = 11.08KK494 pKa = 10.37KK495 pKa = 10.94GFFDD499 pKa = 4.11CVRR502 pKa = 11.84EE503 pKa = 4.18TIMEE507 pKa = 4.13VTGSIFEE514 pKa = 4.82PLTQICIDD522 pKa = 3.94HH523 pKa = 6.46GWFKK527 pKa = 10.83IKK529 pKa = 10.06EE530 pKa = 4.19DD531 pKa = 3.52KK532 pKa = 11.21LKK534 pKa = 11.3VEE536 pKa = 4.51VPDD539 pKa = 3.56TSRR542 pKa = 11.84TFMSYY547 pKa = 8.14MQTEE551 pKa = 4.64FSEE554 pKa = 4.67SKK556 pKa = 10.63AIEE559 pKa = 4.32SLDD562 pKa = 3.07LWEE565 pKa = 5.68YY566 pKa = 11.16LDD568 pKa = 5.44QSNQLYY574 pKa = 7.8THH576 pKa = 6.26VSKK579 pKa = 11.03LMEE582 pKa = 5.03RR583 pKa = 11.84YY584 pKa = 9.49SLPDD588 pKa = 3.42FDD590 pKa = 4.71VEE592 pKa = 4.97KK593 pKa = 11.03FKK595 pKa = 11.05DD596 pKa = 3.46LCAHH600 pKa = 6.62LKK602 pKa = 10.17VGPEE606 pKa = 4.0VITAVIEE613 pKa = 4.07AVMDD617 pKa = 3.62KK618 pKa = 11.02SLGFTVVGGKK628 pKa = 9.86AEE630 pKa = 4.1HH631 pKa = 6.32QFTDD635 pKa = 3.13EE636 pKa = 3.98MKK638 pKa = 10.68AAVAVSADD646 pKa = 3.86YY647 pKa = 10.57GQHH650 pKa = 5.59CTDD653 pKa = 3.49KK654 pKa = 11.01KK655 pKa = 10.33QVASAACKK663 pKa = 10.76NEE665 pKa = 3.67VTKK668 pKa = 10.18PLKK671 pKa = 9.97KK672 pKa = 9.95QWVEE676 pKa = 3.68KK677 pKa = 7.99TTAALPLQATTEE689 pKa = 4.3KK690 pKa = 9.46TQHH693 pKa = 5.08FHH695 pKa = 7.43FNDD698 pKa = 3.4EE699 pKa = 4.51DD700 pKa = 3.92EE701 pKa = 5.12SISVEE706 pKa = 3.96NLHH709 pKa = 6.87LKK711 pKa = 10.39RR712 pKa = 11.84ADD714 pKa = 3.29TFKK717 pKa = 11.05ASKK720 pKa = 10.92ACMLYY725 pKa = 9.49TGTVRR730 pKa = 11.84EE731 pKa = 4.01QQMKK735 pKa = 10.79NFLDD739 pKa = 3.7YY740 pKa = 11.22LSASICATISNIEE753 pKa = 4.28KK754 pKa = 10.37VLSDD758 pKa = 3.27YY759 pKa = 9.97WVSGTQTYY767 pKa = 7.2QTYY770 pKa = 10.94GLWDD774 pKa = 3.78CKK776 pKa = 10.14KK777 pKa = 10.28KK778 pKa = 10.49KK779 pKa = 9.12WVLQPPTAGHH789 pKa = 5.64SWGIASIKK797 pKa = 10.26GEE799 pKa = 4.24HH800 pKa = 6.76FIVMLSFNEE809 pKa = 4.14NVEE812 pKa = 4.65PICDD816 pKa = 3.87SSWDD820 pKa = 3.9MVCVSNDD827 pKa = 3.19TKK829 pKa = 11.02LFSAMKK835 pKa = 9.65ILEE838 pKa = 4.52NLTPLPVKK846 pKa = 10.22EE847 pKa = 4.43SNAKK851 pKa = 7.91ITLVDD856 pKa = 4.08GVPGCGKK863 pKa = 8.25TAEE866 pKa = 4.39ILAKK870 pKa = 10.84ANFKK874 pKa = 10.59KK875 pKa = 10.67DD876 pKa = 3.98LILTQGKK883 pKa = 8.53QAAQMIRR890 pKa = 11.84KK891 pKa = 8.52RR892 pKa = 11.84ANAIDD897 pKa = 3.78CTKK900 pKa = 10.2PANTSNVRR908 pKa = 11.84TVDD911 pKa = 3.54SFLMNPKK918 pKa = 9.83PFTYY922 pKa = 8.69DD923 pKa = 3.26TLWIDD928 pKa = 3.74EE929 pKa = 4.32GLMLHH934 pKa = 6.37TGMVNYY940 pKa = 10.12CVLLSHH946 pKa = 6.35CTKK949 pKa = 10.59CFIYY953 pKa = 10.7GDD955 pKa = 3.79TQQIPFINRR964 pKa = 11.84VMNFDD969 pKa = 3.77YY970 pKa = 10.49PGHH973 pKa = 6.82LRR975 pKa = 11.84TIVVDD980 pKa = 3.55DD981 pKa = 3.81TEE983 pKa = 4.24KK984 pKa = 10.82RR985 pKa = 11.84RR986 pKa = 11.84ITSRR990 pKa = 11.84CPLDD994 pKa = 3.19VTFYY998 pKa = 10.03LTQRR1002 pKa = 11.84YY1003 pKa = 8.2KK1004 pKa = 11.04GPVMSTSSVTRR1015 pKa = 11.84SVEE1018 pKa = 4.18TKK1020 pKa = 10.34FVAGPARR1027 pKa = 11.84FEE1029 pKa = 4.15PRR1031 pKa = 11.84ATPLPGKK1038 pKa = 10.06IVTFTQADD1046 pKa = 3.86KK1047 pKa = 10.14EE1048 pKa = 4.58TLKK1051 pKa = 11.04KK1052 pKa = 10.25KK1053 pKa = 10.45GYY1055 pKa = 9.04NDD1057 pKa = 2.88VHH1059 pKa = 5.93TVHH1062 pKa = 7.38EE1063 pKa = 4.44IQGEE1067 pKa = 4.47TFNEE1071 pKa = 4.09VSLVRR1076 pKa = 11.84LTATPLNIISPEE1088 pKa = 4.11SPHH1091 pKa = 7.52VLVGLSRR1098 pKa = 11.84HH1099 pKa = 5.26TNRR1102 pKa = 11.84LTYY1105 pKa = 8.44YY1106 pKa = 9.69TVVHH1110 pKa = 6.72DD1111 pKa = 5.38CITYY1115 pKa = 10.33SISEE1119 pKa = 4.34LSRR1122 pKa = 11.84LSDD1125 pKa = 4.15YY1126 pKa = 11.22IFDD1129 pKa = 3.84IYY1131 pKa = 11.17SVEE1134 pKa = 4.08GQKK1137 pKa = 10.71AA1138 pKa = 2.99

Molecular weight: 128.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

3226

158

1646

806.5

90.92

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.789 ± 0.412

2.356 ± 0.348

6.603 ± 0.267

5.053 ± 0.146

5.332 ± 0.415

5.115 ± 0.242

2.294 ± 0.208

6.045 ± 0.228

7.347 ± 0.559

8.586 ± 0.392

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.232 ± 0.223

4.371 ± 0.243

3.72 ± 0.154

3.565 ± 0.2

4.278 ± 0.204

6.913 ± 0.145

7.44 ± 0.541

7.161 ± 0.277

1.085 ± 0.142

3.689 ± 0.311
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski