Mungbean yellow mosaic virus (strain Vigna) (MYMV)

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Mungbean yellow mosaic virus

Average proteome isoelectric point is 7.74

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q9YPS7|MVP_MYMVV Movement protein BC1 OS=Mungbean yellow mosaic virus (strain Vigna) OX=223295 GN=BC1 PE=3 SV=1
MM1 pKa = 8.03WDD3 pKa = 3.53PLVNDD8 pKa = 4.95FPKK11 pKa = 10.42SLHH14 pKa = 6.08GFRR17 pKa = 11.84CMLAIKK23 pKa = 9.24YY24 pKa = 8.3LQYY27 pKa = 10.48IQEE30 pKa = 4.51NYY32 pKa = 9.5PSNSLGFVYY41 pKa = 9.17LTEE44 pKa = 5.51LIQVLRR50 pKa = 11.84IRR52 pKa = 11.84KK53 pKa = 8.14HH54 pKa = 5.7AKK56 pKa = 9.43AEE58 pKa = 3.7LRR60 pKa = 11.84YY61 pKa = 9.62RR62 pKa = 11.84LLYY65 pKa = 10.08PDD67 pKa = 4.13VEE69 pKa = 4.62CAEE72 pKa = 4.5EE73 pKa = 4.23ADD75 pKa = 3.82LRR77 pKa = 11.84HH78 pKa = 6.2PAFLTCHH85 pKa = 6.56CGKK88 pKa = 10.35CPCQRR93 pKa = 11.84EE94 pKa = 4.33KK95 pKa = 11.56EE96 pKa = 4.34EE97 pKa = 4.13VDD99 pKa = 3.42QPTHH103 pKa = 6.8VEE105 pKa = 3.86EE106 pKa = 4.39TEE108 pKa = 4.0ILSVIPLSS116 pKa = 3.7

Molecular weight: 13.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q9YPS6|AV2_MYMVV Protein AV2 OS=Mungbean yellow mosaic virus (strain Vigna) OX=223295 GN=AV2 PE=3 SV=1
MM1 pKa = 8.06PKK3 pKa = 10.14RR4 pKa = 11.84NYY6 pKa = 8.53DD7 pKa = 3.7TAFSTPMSNVRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84LTFDD24 pKa = 3.33TPLSLPATAGSVPASAKK41 pKa = 9.31RR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84WTNRR48 pKa = 11.84PMWRR52 pKa = 11.84KK53 pKa = 7.82PRR55 pKa = 11.84YY56 pKa = 7.63YY57 pKa = 10.29RR58 pKa = 11.84LYY60 pKa = 10.24RR61 pKa = 11.84SPDD64 pKa = 3.2VPRR67 pKa = 11.84GCEE70 pKa = 4.34GPCKK74 pKa = 10.07VQSFEE79 pKa = 4.11AKK81 pKa = 9.93HH82 pKa = 6.44DD83 pKa = 3.51ISHH86 pKa = 5.76VGKK89 pKa = 10.03VICVTDD95 pKa = 3.22VTRR98 pKa = 11.84GMGITHH104 pKa = 6.89RR105 pKa = 11.84VGKK108 pKa = 9.5RR109 pKa = 11.84FCVKK113 pKa = 10.5SIWVTGKK120 pKa = 9.22IWMDD124 pKa = 3.31EE125 pKa = 4.07NIKK128 pKa = 9.32TKK130 pKa = 10.61NHH132 pKa = 6.01TNTVMFKK139 pKa = 10.36LVRR142 pKa = 11.84DD143 pKa = 3.79RR144 pKa = 11.84RR145 pKa = 11.84PFGTPQDD152 pKa = 3.81FGQVFNMYY160 pKa = 10.66DD161 pKa = 3.86NEE163 pKa = 4.34PSTATVKK170 pKa = 10.81NDD172 pKa = 2.84LRR174 pKa = 11.84DD175 pKa = 3.4RR176 pKa = 11.84YY177 pKa = 9.76QVVRR181 pKa = 11.84KK182 pKa = 8.4FQATVTGGQYY192 pKa = 10.83ASKK195 pKa = 9.91EE196 pKa = 3.76QAIVSKK202 pKa = 9.71FYY204 pKa = 10.67RR205 pKa = 11.84VNNYY209 pKa = 7.79VVYY212 pKa = 10.46NHH214 pKa = 6.03QEE216 pKa = 3.42AAKK219 pKa = 10.4YY220 pKa = 9.25EE221 pKa = 4.13NHH223 pKa = 6.46TEE225 pKa = 3.99NALLLYY231 pKa = 7.29MACTHH236 pKa = 7.07ASNPVYY242 pKa = 9.86ATLKK246 pKa = 9.47IRR248 pKa = 11.84IYY250 pKa = 10.59FYY252 pKa = 11.32DD253 pKa = 4.06SISNN257 pKa = 3.66

Molecular weight: 29.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

1656

99

361

207.0

23.67

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.374 ± 0.573

2.053 ± 0.307

5.435 ± 0.556

4.589 ± 0.648

4.227 ± 0.237

4.891 ± 0.615

3.382 ± 0.394

5.193 ± 0.559

6.824 ± 0.331

8.213 ± 1.079

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.717 ± 0.534

5.616 ± 0.389

5.918 ± 0.459

3.684 ± 0.245

6.159 ± 0.644

8.816 ± 0.814

5.495 ± 0.851

5.676 ± 0.586

1.208 ± 0.118

4.529 ± 0.305
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski