Aureimonas jatrophae

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Aurantimonadaceae; Aureimonas

Average proteome isoelectric point is 6.51

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4295 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1H0K3Y5|A0A1H0K3Y5_9RHIZ Voltage-gated potassium channel OS=Aureimonas jatrophae OX=1166073 GN=SAMN05192530_10779 PE=4 SV=1
MM1 pKa = 7.32AAAYY5 pKa = 7.96TGTRR9 pKa = 11.84WGASDD14 pKa = 4.13AAGTPGGVVTWSFNLLGAEE33 pKa = 3.92FFGFDD38 pKa = 4.08EE39 pKa = 5.66SILSAPFQAAVRR51 pKa = 11.84AAFDD55 pKa = 3.33VWEE58 pKa = 4.31SLANIDD64 pKa = 3.89FQEE67 pKa = 4.19VATASAQIQLGWDD80 pKa = 3.49TFDD83 pKa = 3.84GAGGTLALAYY93 pKa = 8.44WQYY96 pKa = 11.61QGAKK100 pKa = 8.06TLQAEE105 pKa = 4.49VAFDD109 pKa = 4.06IAEE112 pKa = 4.12NWNPTAGGASFQAVAIHH129 pKa = 6.67EE130 pKa = 4.43IGHH133 pKa = 6.83AIGLAHH139 pKa = 6.92TDD141 pKa = 3.65DD142 pKa = 4.77PTSIMYY148 pKa = 8.75PYY150 pKa = 10.71LSAQTLPSASDD161 pKa = 2.95IAAIQGLYY169 pKa = 10.24GPSDD173 pKa = 3.42RR174 pKa = 11.84GFSLPGTAGNDD185 pKa = 2.84ILTGGRR191 pKa = 11.84GNDD194 pKa = 3.5VISGLEE200 pKa = 4.07GADD203 pKa = 3.49TLQGGLGRR211 pKa = 11.84DD212 pKa = 3.5VLQGNQGDD220 pKa = 4.43DD221 pKa = 3.75LVQGGHH227 pKa = 7.09DD228 pKa = 3.7GDD230 pKa = 4.3EE231 pKa = 4.32VSGGQGNDD239 pKa = 2.63WVYY242 pKa = 11.67GNLGNDD248 pKa = 3.56TLSGNLGNDD257 pKa = 3.42VLSGGAGADD266 pKa = 3.07TFVFMPGSGADD277 pKa = 2.9IVTDD281 pKa = 3.55YY282 pKa = 11.75AFAEE286 pKa = 4.35GDD288 pKa = 3.53RR289 pKa = 11.84LNVGGRR295 pKa = 11.84TYY297 pKa = 11.42AVATASDD304 pKa = 4.33GSALLQLADD313 pKa = 3.62GDD315 pKa = 4.41IIILQGVTQGEE326 pKa = 4.58FSQSYY331 pKa = 7.79VAA333 pKa = 5.39

Molecular weight: 34.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1H0KQ96|A0A1H0KQ96_9RHIZ Uncharacterized protein OS=Aureimonas jatrophae OX=1166073 GN=SAMN05192530_10890 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 10.27QPSKK9 pKa = 9.73LVRR12 pKa = 11.84KK13 pKa = 8.95RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.63GFRR19 pKa = 11.84SRR21 pKa = 11.84MATVGGRR28 pKa = 11.84KK29 pKa = 9.05VLAARR34 pKa = 11.84RR35 pKa = 11.84ARR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 9.03RR41 pKa = 11.84LSAA44 pKa = 4.03

Molecular weight: 5.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4295

0

4295

1370096

31

2376

319.0

34.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.222 ± 0.046

0.735 ± 0.011

5.798 ± 0.03

5.891 ± 0.036

3.651 ± 0.025

8.902 ± 0.034

1.901 ± 0.021

4.531 ± 0.024

2.231 ± 0.028

10.472 ± 0.047

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.23 ± 0.015

2.231 ± 0.021

5.39 ± 0.029

2.835 ± 0.021

8.377 ± 0.042

5.303 ± 0.03

5.307 ± 0.028

7.795 ± 0.03

1.246 ± 0.015

1.952 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski