Tortoise microvirus 37

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W5X0|A0A4P8W5X0_9VIRU Uncharacterized protein OS=Tortoise microvirus 37 OX=2583140 PE=4 SV=1
MM1 pKa = 7.6NYY3 pKa = 9.55VQLEE7 pKa = 4.22HH8 pKa = 7.48LSDD11 pKa = 3.34WVKK14 pKa = 10.42TMGADD19 pKa = 3.18QFFNVGDD26 pKa = 3.59QPRR29 pKa = 11.84AVVFRR34 pKa = 11.84VNNPLYY40 pKa = 10.41PMALEE45 pKa = 4.0ITADD49 pKa = 3.44SNYY52 pKa = 9.13WLLPFGYY59 pKa = 9.71DD60 pKa = 5.02DD61 pKa = 4.77NGQPLPDD68 pKa = 4.76PEE70 pKa = 4.76SGEE73 pKa = 4.19IPSLPGEE80 pKa = 4.73GPTEE84 pKa = 3.65RR85 pKa = 11.84ALARR89 pKa = 11.84LEE91 pKa = 4.11PGMNEE96 pKa = 4.03VAFTLPYY103 pKa = 8.45PALVKK108 pKa = 9.62FYY110 pKa = 10.58RR111 pKa = 11.84IGPDD115 pKa = 3.42GSVQPPGSQFQVRR128 pKa = 11.84RR129 pKa = 11.84YY130 pKa = 10.14DD131 pKa = 3.71LSQLVQEE138 pKa = 4.79SGEE141 pKa = 3.87PSYY144 pKa = 11.46VQIGSRR150 pKa = 11.84PTLDD154 pKa = 3.4PNYY157 pKa = 10.38QRR159 pKa = 11.84MEE161 pKa = 3.64MLMRR165 pKa = 11.84WNEE168 pKa = 3.91VQRR171 pKa = 11.84NRR173 pKa = 11.84AFQEE177 pKa = 3.56EE178 pKa = 4.45LAALRR183 pKa = 11.84DD184 pKa = 3.81EE185 pKa = 5.1FGNPTGTSTDD195 pKa = 2.62VDD197 pKa = 3.6IPVVEE202 pKa = 4.29DD203 pKa = 3.6TVPGGGAA210 pKa = 3.07

Molecular weight: 23.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W685|A0A4P8W685_9VIRU Replication initiation protein OS=Tortoise microvirus 37 OX=2583140 PE=4 SV=1
MM1 pKa = 7.34EE2 pKa = 5.42AVSPPPLPKK11 pKa = 10.04KK12 pKa = 10.65ALTHH16 pKa = 6.56ADD18 pKa = 3.32AAAGLSDD25 pKa = 3.41TVYY28 pKa = 10.37IASADD33 pKa = 3.68YY34 pKa = 10.49RR35 pKa = 11.84RR36 pKa = 11.84LAIRR40 pKa = 11.84TPRR43 pKa = 11.84EE44 pKa = 3.5GAEE47 pKa = 3.61PDD49 pKa = 2.95IVRR52 pKa = 11.84FYY54 pKa = 11.51LAFQKK59 pKa = 11.01DD60 pKa = 3.43LVARR64 pKa = 11.84GFPFFATEE72 pKa = 3.97FLRR75 pKa = 11.84GRR77 pKa = 11.84DD78 pKa = 3.62RR79 pKa = 11.84QQALYY84 pKa = 10.68NAGNSKK90 pKa = 10.73AVFGRR95 pKa = 11.84SPHH98 pKa = 5.44NFGMAVDD105 pKa = 4.09IVHH108 pKa = 7.33CKK110 pKa = 10.3RR111 pKa = 11.84LWDD114 pKa = 4.38LKK116 pKa = 8.2PQEE119 pKa = 3.93WALIGLLGKK128 pKa = 9.8EE129 pKa = 4.28AARR132 pKa = 11.84KK133 pKa = 9.39QSIKK137 pKa = 10.45IEE139 pKa = 3.96WGGDD143 pKa = 2.46WFGRR147 pKa = 11.84GKK149 pKa = 10.56RR150 pKa = 11.84RR151 pKa = 11.84TSPGQVGWDD160 pKa = 3.49PAHH163 pKa = 7.09WEE165 pKa = 3.78LADD168 pKa = 3.21WAKK171 pKa = 10.59RR172 pKa = 11.84IRR174 pKa = 11.84GLL176 pKa = 3.91

Molecular weight: 19.81 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1789

68

542

255.6

28.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.496 ± 0.677

0.894 ± 0.419

6.26 ± 0.405

5.59 ± 0.512

3.969 ± 0.28

8.44 ± 1.057

2.124 ± 0.408

4.472 ± 0.527

4.863 ± 0.586

7.826 ± 0.36

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.851 ± 0.468

3.801 ± 0.841

6.372 ± 0.657

3.913 ± 0.482

7.211 ± 0.577

4.975 ± 0.242

5.646 ± 0.582

6.875 ± 0.6

2.18 ± 0.407

3.242 ± 0.536
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski