Rosellinia necatrix partitivirus 6

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; Betapartitivirus; unclassified Betapartitivirus

Average proteome isoelectric point is 5.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0P0YTQ4|A0A0P0YTQ4_9VIRU RNA dependent RNA polymerase OS=Rosellinia necatrix partitivirus 6 OX=1573459 GN=RdRp PE=4 SV=1
MM1 pKa = 7.47SSVFNNVRR9 pKa = 11.84NYY11 pKa = 10.01LQEE14 pKa = 4.1RR15 pKa = 11.84LQHH18 pKa = 6.52VKK20 pKa = 10.59RR21 pKa = 11.84EE22 pKa = 4.04WQIYY26 pKa = 7.4QATGASSSNMTEE38 pKa = 3.63EE39 pKa = 5.98RR40 pKa = 11.84IQQLQDD46 pKa = 2.93LDD48 pKa = 3.87TRR50 pKa = 11.84RR51 pKa = 11.84MFHH54 pKa = 5.45TARR57 pKa = 11.84NAFDD61 pKa = 3.63TTTNTPGPVSRR72 pKa = 11.84ITEE75 pKa = 3.88EE76 pKa = 3.89QRR78 pKa = 11.84RR79 pKa = 11.84LIYY82 pKa = 10.37DD83 pKa = 3.76AEE85 pKa = 4.31SDD87 pKa = 3.8KK88 pKa = 11.36IMNALRR94 pKa = 11.84QHH96 pKa = 7.1DD97 pKa = 4.26EE98 pKa = 3.85MRR100 pKa = 11.84SQPFEE105 pKa = 4.42LFMTRR110 pKa = 11.84PDD112 pKa = 3.97SDD114 pKa = 5.07PIPPNRR120 pKa = 11.84IAAPGIWQSPLQFHH134 pKa = 6.81TGQIVHH140 pKa = 7.46ADD142 pKa = 3.53PSTTSVLHH150 pKa = 6.44PDD152 pKa = 2.99EE153 pKa = 6.67HH154 pKa = 6.69EE155 pKa = 5.31DD156 pKa = 3.69YY157 pKa = 11.33AEE159 pKa = 4.43SYY161 pKa = 11.14LPGDD165 pKa = 3.29TDD167 pKa = 2.9QGYY170 pKa = 10.31EE171 pKa = 3.98IDD173 pKa = 3.63PTIYY177 pKa = 10.52EE178 pKa = 4.4LLTRR182 pKa = 11.84KK183 pKa = 9.82YY184 pKa = 10.38PEE186 pKa = 4.1YY187 pKa = 10.66LPYY190 pKa = 10.03AQQYY194 pKa = 8.22CRR196 pKa = 11.84PKK198 pKa = 9.73GTTDD202 pKa = 2.79GTFRR206 pKa = 11.84DD207 pKa = 4.32FNKK210 pKa = 9.87EE211 pKa = 3.86QKK213 pKa = 9.74PCPPLDD219 pKa = 3.57SDD221 pKa = 4.35RR222 pKa = 11.84KK223 pKa = 8.5EE224 pKa = 4.14HH225 pKa = 5.66VLKK228 pKa = 10.95HH229 pKa = 4.31VFKK232 pKa = 10.92RR233 pKa = 11.84LAIDD237 pKa = 4.35PYY239 pKa = 11.16LPLHH243 pKa = 6.44FVDD246 pKa = 3.82TQYY249 pKa = 11.64CKK251 pKa = 10.91LPLVTGTGYY260 pKa = 10.77HH261 pKa = 5.45NRR263 pKa = 11.84YY264 pKa = 9.68SYY266 pKa = 10.24RR267 pKa = 11.84QKK269 pKa = 10.09AHH271 pKa = 6.8ASFSHH276 pKa = 6.42PLQYY280 pKa = 10.89GSRR283 pKa = 11.84PTSKK287 pKa = 10.74GYY289 pKa = 10.3FYY291 pKa = 11.19NATYY295 pKa = 10.76EE296 pKa = 3.93NARR299 pKa = 11.84TIIHH303 pKa = 6.57NIKK306 pKa = 10.42EE307 pKa = 4.2SGVPFNIHH315 pKa = 6.42FAPEE319 pKa = 4.05DD320 pKa = 3.66RR321 pKa = 11.84DD322 pKa = 3.71ITDD325 pKa = 3.61TEE327 pKa = 3.57IDD329 pKa = 3.54EE330 pKa = 4.63YY331 pKa = 11.17RR332 pKa = 11.84RR333 pKa = 11.84KK334 pKa = 10.51CNNFFDD340 pKa = 4.24QYY342 pKa = 9.59PTLLFTRR349 pKa = 11.84NHH351 pKa = 5.84ISNRR355 pKa = 11.84DD356 pKa = 3.1GTLKK360 pKa = 10.22VRR362 pKa = 11.84PVYY365 pKa = 10.59AVDD368 pKa = 4.8DD369 pKa = 3.63IFIIIEE375 pKa = 4.05AMLTFPALVQARR387 pKa = 11.84KK388 pKa = 9.12PDD390 pKa = 3.61CCIMYY395 pKa = 10.41GLEE398 pKa = 4.22TIRR401 pKa = 11.84GANHH405 pKa = 6.97KK406 pKa = 9.95LDD408 pKa = 3.97SLAQSFSTYY417 pKa = 8.13FTIDD421 pKa = 2.55WSGYY425 pKa = 6.69DD426 pKa = 3.13QRR428 pKa = 11.84LPRR431 pKa = 11.84AITDD435 pKa = 3.85LFYY438 pKa = 10.74TDD440 pKa = 3.65FLRR443 pKa = 11.84RR444 pKa = 11.84LIVISHH450 pKa = 7.03GYY452 pKa = 8.33QPTYY456 pKa = 10.43EE457 pKa = 4.22YY458 pKa = 8.46PTYY461 pKa = 10.52PDD463 pKa = 3.97LNEE466 pKa = 4.66DD467 pKa = 3.38NMYY470 pKa = 11.51DD471 pKa = 5.17RR472 pKa = 11.84MDD474 pKa = 4.61KK475 pKa = 10.51LLKK478 pKa = 9.37WLHH481 pKa = 5.72LWYY484 pKa = 11.22NNMTFVTADD493 pKa = 3.54GYY495 pKa = 11.44AYY497 pKa = 10.18RR498 pKa = 11.84RR499 pKa = 11.84MYY501 pKa = 10.98AGVPSGLFNTQFLDD515 pKa = 3.59SFANLYY521 pKa = 10.27ILIDD525 pKa = 3.59GMIEE529 pKa = 3.91FGFTDD534 pKa = 3.65EE535 pKa = 5.32EE536 pKa = 4.23IDD538 pKa = 3.86SFLLFVLGDD547 pKa = 4.22DD548 pKa = 3.99NSGMTNLSLARR559 pKa = 11.84LHH561 pKa = 6.65EE562 pKa = 4.98FIQFLEE568 pKa = 4.76AYY570 pKa = 9.66ALTRR574 pKa = 11.84YY575 pKa = 10.27HH576 pKa = 6.22MVLSHH581 pKa = 6.38TKK583 pKa = 10.35SVITALRR590 pKa = 11.84NKK592 pKa = 9.77IEE594 pKa = 4.13SLGYY598 pKa = 9.25QCNFGLPKK606 pKa = 9.82RR607 pKa = 11.84DD608 pKa = 2.97IGKK611 pKa = 9.63LVAQLIYY618 pKa = 9.87PEE620 pKa = 4.9HH621 pKa = 6.8KK622 pKa = 9.87IKK624 pKa = 10.68YY625 pKa = 7.91HH626 pKa = 4.87TMSARR631 pKa = 11.84AIGLAYY637 pKa = 10.23ASCAYY642 pKa = 10.57DD643 pKa = 3.03KK644 pKa = 11.03TFYY647 pKa = 10.81NFCKK651 pKa = 10.22SIYY654 pKa = 10.37NIFLDD659 pKa = 3.92YY660 pKa = 11.37YY661 pKa = 10.63EE662 pKa = 4.84YY663 pKa = 10.89DD664 pKa = 3.42EE665 pKa = 4.52KK666 pKa = 10.76TALNLSRR673 pKa = 11.84FLTTGQDD680 pKa = 3.46DD681 pKa = 4.31LTTQFSWKK689 pKa = 9.53ILPPFPTRR697 pKa = 11.84EE698 pKa = 4.19EE699 pKa = 3.55IRR701 pKa = 11.84KK702 pKa = 9.61QISFYY707 pKa = 10.8HH708 pKa = 6.42GPLDD712 pKa = 4.94YY713 pKa = 10.97APKK716 pKa = 9.86WNFAHH721 pKa = 7.39FINKK725 pKa = 8.99PDD727 pKa = 4.0VIPPSSKK734 pKa = 9.47TMYY737 pKa = 10.16DD738 pKa = 3.47YY739 pKa = 10.95EE740 pKa = 4.68IEE742 pKa = 4.3HH743 pKa = 6.55SLRR746 pKa = 11.84PQPAPTFVARR756 pKa = 4.36

Molecular weight:
88.45 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0P0YTQ4|A0A0P0YTQ4_9VIRU RNA dependent RNA polymerase OS=Rosellinia necatrix partitivirus 6 OX=1573459 GN=RdRp PE=4 SV=1
MM1 pKa = 7.5SSKK4 pKa = 11.08LNLSDD9 pKa = 3.5RR10 pKa = 11.84AKK12 pKa = 10.46KK13 pKa = 10.41VSALKK18 pKa = 10.13TEE20 pKa = 4.37TTFKK24 pKa = 10.92AIDD27 pKa = 3.98LPGPTANFTTAFKK40 pKa = 10.59KK41 pKa = 10.86GSAPKK46 pKa = 9.38TGLANEE52 pKa = 4.53HH53 pKa = 5.86YY54 pKa = 10.72VYY56 pKa = 11.08VLPDD60 pKa = 3.79FSNILMFIIYY70 pKa = 9.47HH71 pKa = 7.15AIQFGPSLEE80 pKa = 4.37IKK82 pKa = 9.82NHH84 pKa = 5.93PKK86 pKa = 9.97VSIPVFVSYY95 pKa = 11.07CLTLVYY101 pKa = 11.04AHH103 pKa = 6.64FLVSDD108 pKa = 4.13AYY110 pKa = 9.83INPGQPHH117 pKa = 6.4FAMTIKK123 pKa = 10.61NDD125 pKa = 3.63SAYY128 pKa = 10.84SEE130 pKa = 4.33YY131 pKa = 11.21LDD133 pKa = 4.62FLLTLPVPEE142 pKa = 4.65FLTPLFAKK150 pKa = 8.2FTSTTTSRR158 pKa = 11.84RR159 pKa = 11.84TNTWFLASAEE169 pKa = 4.08GFMHH173 pKa = 6.2FTHH176 pKa = 7.45FGRR179 pKa = 11.84FFPINLFLNMHH190 pKa = 6.91DD191 pKa = 3.4LAARR195 pKa = 11.84TEE197 pKa = 4.33SRR199 pKa = 11.84ANPAEE204 pKa = 3.98VFYY207 pKa = 10.58DD208 pKa = 3.74LNMTEE213 pKa = 4.46IFHH216 pKa = 5.28ITKK219 pKa = 10.15YY220 pKa = 10.14RR221 pKa = 11.84DD222 pKa = 3.25PSVTTDD228 pKa = 2.98TAVTYY233 pKa = 10.05RR234 pKa = 11.84YY235 pKa = 10.12HH236 pKa = 7.13NFFASLYY243 pKa = 6.6PTTATTKK250 pKa = 8.87TRR252 pKa = 11.84RR253 pKa = 11.84SMNFFYY259 pKa = 10.44EE260 pKa = 4.05SRR262 pKa = 11.84INQVLEE268 pKa = 3.98GLFNPVLLRR277 pKa = 11.84AQQQRR282 pKa = 11.84QAFSRR287 pKa = 11.84ISIEE291 pKa = 3.84APTFEE296 pKa = 4.18TANYY300 pKa = 9.5NPYY303 pKa = 10.06FALLAITKK311 pKa = 9.54EE312 pKa = 4.15NIPEE316 pKa = 4.38LMTVMQSVADD326 pKa = 4.65TINGSIPIKK335 pKa = 10.27SQLNKK340 pKa = 10.1MYY342 pKa = 10.56DD343 pKa = 3.3NYY345 pKa = 11.25SGVSILDD352 pKa = 3.06HH353 pKa = 6.86GYY355 pKa = 11.23AGFPTPTWDD364 pKa = 4.3ADD366 pKa = 4.02SNLPDD371 pKa = 4.77NDD373 pKa = 3.46TTLDD377 pKa = 3.37KK378 pKa = 10.74FVYY381 pKa = 10.26NNAVLKK387 pKa = 10.85FEE389 pKa = 5.37GIPLSNYY396 pKa = 9.28AAAIKK401 pKa = 10.25FKK403 pKa = 10.89GAISSQSWTLSNNIIARR420 pKa = 11.84IDD422 pKa = 3.32RR423 pKa = 11.84SEE425 pKa = 4.15AVPNVTDD432 pKa = 4.15PAPDD436 pKa = 3.6TVIVTTTITPGSAYY450 pKa = 10.68LSLLALATVTDD461 pKa = 3.7RR462 pKa = 11.84HH463 pKa = 6.2DD464 pKa = 3.61VASSSTFYY472 pKa = 11.14LPNTASGPTDD482 pKa = 3.72EE483 pKa = 5.82NDD485 pKa = 3.62HH486 pKa = 5.35QHH488 pKa = 5.41MTTGNHH494 pKa = 5.19VLRR497 pKa = 11.84SYY499 pKa = 10.82SAEE502 pKa = 3.74LDD504 pKa = 3.29NYY506 pKa = 8.39PTVKK510 pKa = 10.22VLQFAEE516 pKa = 4.35TDD518 pKa = 3.74DD519 pKa = 3.68EE520 pKa = 4.43TAYY523 pKa = 10.78QATLFGTVIYY533 pKa = 10.49SDD535 pKa = 4.09EE536 pKa = 4.22LVGSIVNHH544 pKa = 5.69PHH546 pKa = 5.1PTSRR550 pKa = 11.84VEE552 pKa = 3.98EE553 pKa = 4.48DD554 pKa = 2.82NSLFLTSCIQFRR566 pKa = 11.84TTHH569 pKa = 6.79LATNFKK575 pKa = 9.45TNNPIASIIMKK586 pKa = 9.17TPAPTNDD593 pKa = 3.08AQFALSLYY601 pKa = 9.74RR602 pKa = 11.84SPNVTIPRR610 pKa = 11.84ITTHH614 pKa = 5.81TAHH617 pKa = 6.5SGYY620 pKa = 10.5HH621 pKa = 6.1RR622 pKa = 11.84DD623 pKa = 3.05TYY625 pKa = 11.12GLHH628 pKa = 7.13RR629 pKa = 11.84MTTNISVPEE638 pKa = 4.13FSQSILSYY646 pKa = 7.73TVRR649 pKa = 11.84DD650 pKa = 3.73RR651 pKa = 11.84PSRR654 pKa = 11.84RR655 pKa = 11.84HH656 pKa = 4.81QAPIHH661 pKa = 5.97EE662 pKa = 5.09PPSTPYY668 pKa = 10.61YY669 pKa = 10.57RR670 pKa = 11.84LLLWSPYY677 pKa = 10.6VFVTPNYY684 pKa = 9.9NRR686 pKa = 11.84DD687 pKa = 3.11WEE689 pKa = 4.1QDD691 pKa = 3.21EE692 pKa = 4.78FGQALLDD699 pKa = 3.45HH700 pKa = 7.03HH701 pKa = 7.11YY702 pKa = 9.33VTNLRR707 pKa = 11.84TIFGLDD713 pKa = 2.69ATMIEE718 pKa = 4.4VRR720 pKa = 11.84SGSAAMPVAA729 pKa = 4.54

Molecular weight:
81.96 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1485

729

756

742.5

85.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.936 ± 0.89

0.741 ± 0.321

6.128 ± 0.724

4.579 ± 0.413

5.993 ± 0.123

3.704 ± 0.283

3.569 ± 0.002

6.061 ± 0.206

3.838 ± 0.376

8.485 ± 0.081

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.155 ± 0.067

5.32 ± 0.587

6.465 ± 0.082

3.502 ± 0.616

5.387 ± 0.686

6.936 ± 0.89

9.091 ± 1.2

4.31 ± 0.809

0.808 ± 0.084

5.993 ± 0.725

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski