Luteimonas aestuarii

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteimonas

Average proteome isoelectric point is 6.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3335 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4R5U4Q5|A0A4R5U4Q5_9GAMM Right-handed parallel beta-helix repeat-containing protein OS=Luteimonas aestuarii OX=453837 GN=E2F46_00415 PE=4 SV=1
MM1 pKa = 7.49TIKK4 pKa = 9.97TYY6 pKa = 10.4TPAEE10 pKa = 4.59AIQAAQAEE18 pKa = 4.77GCIEE22 pKa = 3.89IAAGVHH28 pKa = 6.52LSSQEE33 pKa = 4.08NIVADD38 pKa = 3.58QDD40 pKa = 3.6DD41 pKa = 4.03WSVEE45 pKa = 3.64GDD47 pKa = 3.44QMHH50 pKa = 7.74DD51 pKa = 3.63FTKK54 pKa = 10.47APYY57 pKa = 9.58WITTNDD63 pKa = 3.53GQVQPIYY70 pKa = 11.44GMDD73 pKa = 3.97DD74 pKa = 3.34KK75 pKa = 11.84DD76 pKa = 5.72LIDD79 pKa = 3.72VLANAA84 pKa = 5.26

Molecular weight: 9.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4R5TXZ5|A0A4R5TXZ5_9GAMM MPT synthase subunit 2 OS=Luteimonas aestuarii OX=453837 GN=E2F46_05525 PE=3 SV=1
MM1 pKa = 6.08TQARR5 pKa = 11.84RR6 pKa = 11.84TRR8 pKa = 11.84SKK10 pKa = 10.45EE11 pKa = 3.76RR12 pKa = 11.84GNGRR16 pKa = 11.84PAPPAAADD24 pKa = 3.42ARR26 pKa = 11.84EE27 pKa = 4.05AGLLYY32 pKa = 10.61VDD34 pKa = 5.49DD35 pKa = 4.69SAPGIHH41 pKa = 7.0RR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84CGRR47 pKa = 11.84GFRR50 pKa = 11.84YY51 pKa = 10.39DD52 pKa = 3.87DD53 pKa = 3.41ATGVCIRR60 pKa = 11.84DD61 pKa = 3.38EE62 pKa = 4.16ATLARR67 pKa = 11.84IRR69 pKa = 11.84ALAIPPAYY77 pKa = 10.14VDD79 pKa = 3.15VWICASPRR87 pKa = 11.84GHH89 pKa = 6.67LQATGRR95 pKa = 11.84DD96 pKa = 3.29ARR98 pKa = 11.84GRR100 pKa = 11.84KK101 pKa = 7.65QYY103 pKa = 10.33RR104 pKa = 11.84YY105 pKa = 9.59HH106 pKa = 6.99PDD108 pKa = 2.62WRR110 pKa = 11.84STRR113 pKa = 11.84DD114 pKa = 2.81ADD116 pKa = 4.39KK117 pKa = 10.68FDD119 pKa = 4.01RR120 pKa = 11.84LLAFGKK126 pKa = 10.15ALPRR130 pKa = 11.84LRR132 pKa = 11.84RR133 pKa = 11.84RR134 pKa = 11.84LRR136 pKa = 11.84IDD138 pKa = 3.48LSLRR142 pKa = 11.84GLPRR146 pKa = 11.84EE147 pKa = 4.0KK148 pKa = 10.74ALAALVTIMATTLMRR163 pKa = 11.84IGNDD167 pKa = 2.6EE168 pKa = 3.99YY169 pKa = 11.64ARR171 pKa = 11.84DD172 pKa = 3.74NGSYY176 pKa = 11.32GLTTLRR182 pKa = 11.84NRR184 pKa = 11.84HH185 pKa = 5.46AKK187 pKa = 9.52FLRR190 pKa = 11.84DD191 pKa = 3.45GLHH194 pKa = 6.18LQFKK198 pKa = 9.93GKK200 pKa = 10.13GGKK203 pKa = 6.86THH205 pKa = 7.65DD206 pKa = 4.04AGIDD210 pKa = 3.3DD211 pKa = 4.07RR212 pKa = 11.84RR213 pKa = 11.84LVKK216 pKa = 10.46IMRR219 pKa = 11.84AMHH222 pKa = 6.49EE223 pKa = 4.27LPGQRR228 pKa = 11.84LFQYY232 pKa = 10.7RR233 pKa = 11.84DD234 pKa = 3.28DD235 pKa = 4.38EE236 pKa = 5.0GNLRR240 pKa = 11.84PLDD243 pKa = 3.87SSDD246 pKa = 3.4ANDD249 pKa = 3.66YY250 pKa = 10.83LRR252 pKa = 11.84EE253 pKa = 3.98RR254 pKa = 11.84MGGPFTAKK262 pKa = 10.49DD263 pKa = 3.53FRR265 pKa = 11.84TWGATATAFRR275 pKa = 11.84LLAATPVPEE284 pKa = 5.11DD285 pKa = 3.13ATKK288 pKa = 10.62RR289 pKa = 11.84DD290 pKa = 3.35IAGVEE295 pKa = 3.71RR296 pKa = 11.84DD297 pKa = 3.76VVNAVAEE304 pKa = 4.27MLGNTPAVCRR314 pKa = 11.84KK315 pKa = 10.15SYY317 pKa = 10.75IDD319 pKa = 3.38PCVFDD324 pKa = 3.77GWQDD328 pKa = 3.43GRR330 pKa = 11.84LHH332 pKa = 6.97RR333 pKa = 11.84AAQGARR339 pKa = 11.84GPRR342 pKa = 11.84QWEE345 pKa = 4.15TATLRR350 pKa = 11.84YY351 pKa = 9.05LRR353 pKa = 11.84RR354 pKa = 11.84VKK356 pKa = 10.62KK357 pKa = 10.17PSRR360 pKa = 3.51

Molecular weight: 40.66 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3335

0

3335

1091155

22

2104

327.2

35.51

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.252 ± 0.064

0.824 ± 0.014

6.277 ± 0.036

5.297 ± 0.035

3.382 ± 0.024

8.723 ± 0.038

2.328 ± 0.022

4.023 ± 0.033

2.4 ± 0.038

10.559 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.245 ± 0.02

2.351 ± 0.028

5.401 ± 0.031

3.488 ± 0.028

8.098 ± 0.047

4.994 ± 0.027

4.966 ± 0.033

7.624 ± 0.041

1.55 ± 0.019

2.218 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski