Hypericibacter adhaerens

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Hypericibacter

Average proteome isoelectric point is 6.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5227 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5J6N5H7|A0A5J6N5H7_9PROT Uncharacterized protein OS=Hypericibacter adhaerens OX=2602016 GN=FRZ61_51170 PE=4 SV=1
MM1 pKa = 7.51KK2 pKa = 10.41NVLLGTTALVAAGLVASHH20 pKa = 6.95AEE22 pKa = 3.87AAQGVQLGIGGYY34 pKa = 8.36YY35 pKa = 9.87AAAAGLLFDD44 pKa = 4.7QSDD47 pKa = 4.19GNGDD51 pKa = 3.97PGDD54 pKa = 3.73HH55 pKa = 6.43TRR57 pKa = 11.84DD58 pKa = 2.91IVFRR62 pKa = 11.84QDD64 pKa = 3.1VEE66 pKa = 4.0IHH68 pKa = 6.19FKK70 pKa = 11.55GEE72 pKa = 3.95TTLDD76 pKa = 3.17NGLTVGARR84 pKa = 11.84VEE86 pKa = 4.93LEE88 pKa = 4.18GQQSTDD94 pKa = 3.34QIDD97 pKa = 3.88EE98 pKa = 3.7VWAYY102 pKa = 10.17FKK104 pKa = 11.24GGWGEE109 pKa = 4.17LRR111 pKa = 11.84FGDD114 pKa = 5.18DD115 pKa = 5.06DD116 pKa = 5.33DD117 pKa = 4.43ATEE120 pKa = 3.79QLGYY124 pKa = 10.28IIPSASNIFGVDD136 pKa = 3.03TPYY139 pKa = 11.11FEE141 pKa = 5.15FANNHH146 pKa = 5.37GGFTNGVFQTNSTLMDD162 pKa = 3.56ISSDD166 pKa = 3.17ATKK169 pKa = 10.11IIYY172 pKa = 8.86FSPTFAGFSFAASFAPDD189 pKa = 3.05RR190 pKa = 11.84RR191 pKa = 11.84GEE193 pKa = 3.98DD194 pKa = 3.33TYY196 pKa = 11.46SYY198 pKa = 10.42WSGPGGTTNSNNTGQVQNVFAAALNFDD225 pKa = 3.77HH226 pKa = 7.57DD227 pKa = 4.57FNGVSLATGVGFAEE241 pKa = 4.89GQWEE245 pKa = 4.61TKK247 pKa = 10.72ASGANVDD254 pKa = 4.01TTWGVNGHH262 pKa = 6.98LDD264 pKa = 3.37VSFSGFTIGGSGMYY278 pKa = 9.51RR279 pKa = 11.84DD280 pKa = 4.23NWQSSAGTDD289 pKa = 3.27YY290 pKa = 10.47WVAGIGATYY299 pKa = 10.63NWDD302 pKa = 2.79AWTVGLAWSHH312 pKa = 6.14GDD314 pKa = 3.7YY315 pKa = 10.67EE316 pKa = 4.57YY317 pKa = 11.04TPSNDD322 pKa = 3.46DD323 pKa = 3.57DD324 pKa = 6.17KK325 pKa = 11.68IDD327 pKa = 3.32IVEE330 pKa = 4.08FTGRR334 pKa = 11.84YY335 pKa = 9.5DD336 pKa = 3.99LGPGISLDD344 pKa = 3.73GMVGYY349 pKa = 11.24NDD351 pKa = 3.79MNAGDD356 pKa = 4.66TGHH359 pKa = 6.67QDD361 pKa = 3.42DD362 pKa = 4.9KK363 pKa = 10.76TWEE366 pKa = 4.3AGVGFYY372 pKa = 10.23IGFF375 pKa = 3.99

Molecular weight: 40.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5J6MTN6|A0A5J6MTN6_9PROT Polyphosphate kinase OS=Hypericibacter adhaerens OX=2602016 GN=FRZ61_06080 PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.36RR3 pKa = 11.84TYY5 pKa = 10.1QPSVLVRR12 pKa = 11.84KK13 pKa = 9.31RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.43GFRR19 pKa = 11.84ARR21 pKa = 11.84MATVGGRR28 pKa = 11.84KK29 pKa = 9.34VIASRR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.73GRR39 pKa = 11.84KK40 pKa = 8.92RR41 pKa = 11.84LSAA44 pKa = 3.96

Molecular weight: 5.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5227

0

5227

1721620

39

5653

329.4

35.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.745 ± 0.057

0.869 ± 0.01

5.508 ± 0.056

5.638 ± 0.034

3.556 ± 0.018

8.957 ± 0.061

2.073 ± 0.017

5.077 ± 0.025

3.217 ± 0.028

10.656 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.319 ± 0.016

2.435 ± 0.029

5.515 ± 0.032

3.177 ± 0.02

7.385 ± 0.049

5.059 ± 0.027

5.042 ± 0.055

7.038 ± 0.03

1.436 ± 0.014

2.299 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski