Meiothermus luteus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus

Average proteome isoelectric point is 7.05

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2850 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A399F4D6|A0A399F4D6_9DEIN Uncharacterized protein OS=Meiothermus luteus OX=2026184 GN=Mlute_00041 PE=4 SV=1
MM1 pKa = 7.83RR2 pKa = 11.84EE3 pKa = 4.09EE4 pKa = 4.95LCPEE8 pKa = 4.15CQGDD12 pKa = 4.47GYY14 pKa = 10.02VTVACDD20 pKa = 3.93YY21 pKa = 10.53YY22 pKa = 10.16SASYY26 pKa = 10.36GYY28 pKa = 10.05YY29 pKa = 10.2LQDD32 pKa = 3.65EE33 pKa = 4.72RR34 pKa = 11.84PVPCRR39 pKa = 11.84MCGGSGYY46 pKa = 10.04VEE48 pKa = 4.03VMEE51 pKa = 5.34AEE53 pKa = 4.48VAEE56 pKa = 4.48EE57 pKa = 3.86AAA59 pKa = 4.45

Molecular weight: 6.55 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A399EAS6|A0A399EAS6_9DEIN 30S ribosomal protein S7 OS=Meiothermus luteus OX=2026184 GN=rpsG PE=3 SV=1
MM1 pKa = 7.22IRR3 pKa = 11.84VSGTSSMRR11 pKa = 11.84ALKK14 pKa = 5.88TTPWARR20 pKa = 11.84ARR22 pKa = 11.84PMTTHH27 pKa = 7.93PITNQRR33 pKa = 11.84FIPNHH38 pKa = 6.06LLHH41 pKa = 6.29FTAPKK46 pKa = 9.9VRR48 pKa = 11.84PATRR52 pKa = 3.24

Molecular weight: 5.95 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2850

0

2850

849109

29

1852

297.9

32.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.059 ± 0.049

0.575 ± 0.012

3.695 ± 0.028

7.364 ± 0.051

3.596 ± 0.034

8.953 ± 0.04

1.937 ± 0.023

3.59 ± 0.034

3.054 ± 0.033

13.146 ± 0.071

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.792 ± 0.02

2.183 ± 0.027

6.075 ± 0.036

3.865 ± 0.027

7.988 ± 0.051

4.53 ± 0.031

4.292 ± 0.033

7.806 ± 0.043

1.614 ± 0.019

2.884 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski