Faecalitalea cylindroides T2-87

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea; Faecalitalea cylindroides

Average proteome isoelectric point is 6.27

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1442 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D4JG29|D4JG29_9FIRM ABC-2 type transporter OS=Faecalitalea cylindroides T2-87 OX=717960 GN=EC1_19200 PE=4 SV=1
MM1 pKa = 7.43KK2 pKa = 10.37KK3 pKa = 9.86IFTFFISTFMILNLAACSSNNDD25 pKa = 3.26DD26 pKa = 3.67YY27 pKa = 12.08ALEE30 pKa = 4.35FFSALDD36 pKa = 3.37NTLEE40 pKa = 4.34LNSGHH45 pKa = 6.16IQGTFTSNNEE55 pKa = 3.89DD56 pKa = 3.07ASKK59 pKa = 10.76IKK61 pKa = 10.52FDD63 pKa = 3.9LQLNQKK69 pKa = 10.75DD70 pKa = 4.07NLQLALDD77 pKa = 4.74LDD79 pKa = 4.52LEE81 pKa = 5.24AGDD84 pKa = 3.84NAEE87 pKa = 4.94DD88 pKa = 3.67NFLNFYY94 pKa = 10.68IKK96 pKa = 10.5DD97 pKa = 3.32NKK99 pKa = 10.29TYY101 pKa = 10.45LNSYY105 pKa = 7.77GTTSQSLLEE114 pKa = 3.93NLGINGSEE122 pKa = 4.17KK123 pKa = 10.65LSVYY127 pKa = 10.82NPFLNYY133 pKa = 9.91TDD135 pKa = 5.72DD136 pKa = 3.62EE137 pKa = 4.59LKK139 pKa = 11.1ALFTRR144 pKa = 11.84SSKK147 pKa = 10.93NGNNYY152 pKa = 10.1SFTIDD157 pKa = 3.18GSLISSYY164 pKa = 10.27LDD166 pKa = 3.01SMGSVTIEE174 pKa = 4.64DD175 pKa = 3.67ATLDD179 pKa = 3.42ATIEE183 pKa = 4.11DD184 pKa = 4.26NYY186 pKa = 9.6ITSLTLGISGLQDD199 pKa = 3.09VEE201 pKa = 4.41TQQVIIDD208 pKa = 3.7VTIEE212 pKa = 4.06CTLDD216 pKa = 3.3QINSLDD222 pKa = 3.82TVTYY226 pKa = 9.37PADD229 pKa = 3.68LEE231 pKa = 4.53NYY233 pKa = 9.49

Molecular weight: 25.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D4JEF5|D4JEF5_9FIRM Uncharacterized protein OS=Faecalitalea cylindroides T2-87 OX=717960 GN=EC1_10460 PE=4 SV=1
MM1 pKa = 8.04DD2 pKa = 4.82KK3 pKa = 10.86LFRR6 pKa = 11.84SDD8 pKa = 5.24QRR10 pKa = 11.84PCDD13 pKa = 3.83PDD15 pKa = 4.8GGTSGAMRR23 pKa = 11.84ARR25 pKa = 11.84GLKK28 pKa = 9.03DD29 pKa = 3.16TSSRR33 pKa = 11.84PAKK36 pKa = 10.44DD37 pKa = 2.94LGGTLRR43 pKa = 11.84HH44 pKa = 6.6TIRR47 pKa = 11.84TMLRR51 pKa = 11.84SYY53 pKa = 11.13DD54 pKa = 3.46SRR56 pKa = 11.84ASGDD60 pKa = 3.78LLCSHH65 pKa = 6.88RR66 pKa = 11.84QGGVANMASNPNRR79 pKa = 11.84ITVAAPGFYY88 pKa = 10.09PKK90 pKa = 10.1ISFRR94 pKa = 11.84LVRR97 pKa = 11.84LFKK100 pKa = 10.96YY101 pKa = 10.43

Molecular weight: 11.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1442

0

1442

362689

15

3253

251.5

28.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.608 ± 0.081

1.505 ± 0.029

6.057 ± 0.055

7.344 ± 0.083

4.197 ± 0.052

6.128 ± 0.058

1.935 ± 0.029

8.01 ± 0.085

7.554 ± 0.081

9.163 ± 0.081

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.15 ± 0.043

4.755 ± 0.053

3.147 ± 0.037

3.706 ± 0.05

3.952 ± 0.072

5.948 ± 0.049

5.259 ± 0.062

6.6 ± 0.063

0.822 ± 0.022

4.161 ± 0.047
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski