Achromobacter phage vB_AxyP_19-32_Axy10

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Schitoviridae; Rothmandenesvirinae; Pourcelvirus; Achromobacter virus Axy10

Average proteome isoelectric point is 6.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 83 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A514CU38|A0A514CU38_9CAUD Uncharacterized protein OS=Achromobacter phage vB_AxyP_19-32_Axy10 OX=2591041 GN=Axy10_027 PE=4 SV=1
MM1 pKa = 7.2YY2 pKa = 10.48SWLDD6 pKa = 3.62KK7 pKa = 10.76IIEE10 pKa = 4.12EE11 pKa = 3.93QAAYY15 pKa = 11.03YY16 pKa = 11.16GMTPEE21 pKa = 4.12KK22 pKa = 10.22WEE24 pKa = 3.99QLKK27 pKa = 10.01EE28 pKa = 3.61AAIQYY33 pKa = 9.58EE34 pKa = 4.39EE35 pKa = 4.56EE36 pKa = 4.23NPHH39 pKa = 5.02VV40 pKa = 3.79

Molecular weight: 4.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A514CU26|A0A514CU26_9CAUD Uncharacterized protein OS=Achromobacter phage vB_AxyP_19-32_Axy10 OX=2591041 GN=Axy10_037 PE=4 SV=1
MM1 pKa = 7.31TRR3 pKa = 11.84RR4 pKa = 11.84IDD6 pKa = 3.17HH7 pKa = 6.38WNGNRR12 pKa = 11.84NEE14 pKa = 4.3AFYY17 pKa = 10.9SSHH20 pKa = 6.06PTRR23 pKa = 11.84LQEE26 pKa = 4.85IRR28 pKa = 11.84DD29 pKa = 3.74RR30 pKa = 11.84TNNQIPFNWKK40 pKa = 7.06TRR42 pKa = 11.84KK43 pKa = 9.34CVCCKK48 pKa = 10.14RR49 pKa = 11.84SRR51 pKa = 11.84SLTQFNGDD59 pKa = 2.98SATCKK64 pKa = 9.98RR65 pKa = 11.84CPPEE69 pKa = 3.73KK70 pKa = 10.66

Molecular weight: 8.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

83

0

83

23004

40

3437

277.2

30.91

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.255 ± 0.635

0.696 ± 0.11

5.847 ± 0.132

6.508 ± 0.227

3.525 ± 0.151

6.894 ± 0.191

1.987 ± 0.185

5.382 ± 0.275

6.282 ± 0.226

8.081 ± 0.228

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.286 ± 0.119

4.804 ± 0.168

4.656 ± 0.234

4.704 ± 0.255

4.977 ± 0.182

5.56 ± 0.164

5.856 ± 0.255

6.877 ± 0.274

1.504 ± 0.209

3.321 ± 0.196
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski