Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10)

Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Thiovulaceae; Sulfurimonas; Sulfurimonas autotrophica

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2155 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E0UPK6|E0UPK6_SULAO HI0933 family protein OS=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) OX=563040 GN=Saut_0549 PE=4 SV=1
MM1 pKa = 7.8LSTILEE7 pKa = 4.16SLYY10 pKa = 11.15LKK12 pKa = 10.61VLVNIVVQRR21 pKa = 11.84EE22 pKa = 4.16STLVHH27 pKa = 6.84IEE29 pKa = 3.97LCSKK33 pKa = 10.48KK34 pKa = 10.81GIVDD38 pKa = 3.68EE39 pKa = 4.86VSTEE43 pKa = 4.1FNTTLLNNQMYY54 pKa = 10.53DD55 pKa = 4.12FISEE59 pKa = 4.4YY60 pKa = 10.25IKK62 pKa = 10.32EE63 pKa = 4.2SPYY66 pKa = 10.49FYY68 pKa = 10.54ISILDD73 pKa = 3.56TSIVQGAIPTCEE85 pKa = 4.03KK86 pKa = 11.02NKK88 pKa = 10.34LSYY91 pKa = 11.06YY92 pKa = 9.9YY93 pKa = 9.84DD94 pKa = 3.75LSMSEE99 pKa = 4.43YY100 pKa = 10.88KK101 pKa = 11.01CFDD104 pKa = 3.82NKK106 pKa = 10.08WNFYY110 pKa = 6.47TAKK113 pKa = 10.58NDD115 pKa = 2.63IHH117 pKa = 7.64QIEE120 pKa = 4.79RR121 pKa = 11.84EE122 pKa = 4.08YY123 pKa = 11.24EE124 pKa = 4.15DD125 pKa = 4.07IGIDD129 pKa = 3.51MIFSPFVILANFFQDD144 pKa = 4.65KK145 pKa = 10.46INNNLAMYY153 pKa = 10.84ALVQDD158 pKa = 4.29GFISVAVFEE167 pKa = 4.5NSQLLYY173 pKa = 10.91AEE175 pKa = 4.84HH176 pKa = 7.88LDD178 pKa = 3.61MLTGDD183 pKa = 3.94EE184 pKa = 5.11NEE186 pKa = 5.44DD187 pKa = 3.15ILLNEE192 pKa = 4.92NIEE195 pKa = 4.1EE196 pKa = 4.69DD197 pKa = 3.87LDD199 pKa = 4.34LDD201 pKa = 4.54SGIDD205 pKa = 3.98LEE207 pKa = 6.32DD208 pKa = 4.23IDD210 pKa = 5.62VDD212 pKa = 3.74EE213 pKa = 5.59GDD215 pKa = 4.05INSLDD220 pKa = 3.63EE221 pKa = 4.89FGDD224 pKa = 3.92IEE226 pKa = 5.35DD227 pKa = 4.9LDD229 pKa = 4.03SLEE232 pKa = 5.79DD233 pKa = 3.48IDD235 pKa = 5.45EE236 pKa = 4.67FSDD239 pKa = 3.5NKK241 pKa = 10.78DD242 pKa = 3.43VEE244 pKa = 4.45EE245 pKa = 4.28EE246 pKa = 4.46LYY248 pKa = 10.86EE249 pKa = 4.17SDD251 pKa = 5.1KK252 pKa = 11.08ILPEE256 pKa = 4.32DD257 pKa = 4.08EE258 pKa = 4.09EE259 pKa = 5.18NEE261 pKa = 4.18AFNEE265 pKa = 4.18DD266 pKa = 3.7YY267 pKa = 11.08QRR269 pKa = 11.84FSLMQSAVANFYY281 pKa = 10.8RR282 pKa = 11.84DD283 pKa = 3.3DD284 pKa = 3.9KK285 pKa = 11.05YY286 pKa = 11.28EE287 pKa = 3.91SRR289 pKa = 11.84FIEE292 pKa = 3.91NVYY295 pKa = 10.35IADD298 pKa = 4.0CAGVTNDD305 pKa = 3.17LKK307 pKa = 11.12KK308 pKa = 10.8YY309 pKa = 10.39LEE311 pKa = 4.12EE312 pKa = 3.91EE313 pKa = 4.13MFFNVYY319 pKa = 7.61VRR321 pKa = 11.84RR322 pKa = 11.84ADD324 pKa = 3.69LGVEE328 pKa = 4.11VCEE331 pKa = 4.01LAKK334 pKa = 10.23MEE336 pKa = 5.07LGLL339 pKa = 4.78

Molecular weight: 39.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E0UPP8|E0UPP8_SULAO Peptidase M23 OS=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) OX=563040 GN=Saut_0591 PE=4 SV=1
MM1 pKa = 7.28KK2 pKa = 9.44RR3 pKa = 11.84TYY5 pKa = 10.04QPHH8 pKa = 4.86NTPRR12 pKa = 11.84KK13 pKa = 7.32RR14 pKa = 11.84THH16 pKa = 6.0GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.32NGRR28 pKa = 11.84NIINRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.99GRR39 pKa = 11.84KK40 pKa = 8.87KK41 pKa = 10.21LTVV44 pKa = 3.1

Molecular weight: 5.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2155

0

2155

672986

30

1662

312.3

35.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.079 ± 0.053

0.858 ± 0.021

5.685 ± 0.033

6.933 ± 0.063

4.868 ± 0.043

5.729 ± 0.056

2.039 ± 0.021

8.356 ± 0.057

8.715 ± 0.06

9.749 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.693 ± 0.023

5.311 ± 0.047

2.971 ± 0.034

3.195 ± 0.03

3.265 ± 0.038

6.261 ± 0.043

5.121 ± 0.046

6.357 ± 0.041

0.731 ± 0.018

4.084 ± 0.04
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski