Metarhizium album (strain ARSEF 1941)
Average proteome isoelectric point is 6.7
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 8389 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A0B2WEE3|A0A0B2WEE3_METAS Uncharacterized protein OS=Metarhizium album (strain ARSEF 1941) OX=1081103 GN=MAM_07953 PE=4 SV=1
MM1 pKa = 7.63 FDD3 pKa = 5.01 DD4 pKa = 4.95 EE5 pKa = 4.91 NLSIYY10 pKa = 10.65 DD11 pKa = 3.91 EE12 pKa = 4.49 IEE14 pKa = 4.35 IEE16 pKa = 5.56 DD17 pKa = 3.67 MTFDD21 pKa = 4.08 EE22 pKa = 5.15 SLQLYY27 pKa = 9.1 HH28 pKa = 6.46 YY29 pKa = 7.68 PCPCGDD35 pKa = 3.77 RR36 pKa = 11.84 FQIALDD42 pKa = 3.95 DD43 pKa = 4.77 LRR45 pKa = 11.84 DD46 pKa = 3.68 EE47 pKa = 4.38 QDD49 pKa = 2.94 IAVCPSCSLMVRR61 pKa = 11.84 VIFDD65 pKa = 4.66 LDD67 pKa = 4.31 DD68 pKa = 4.16 LPKK71 pKa = 10.42 PPPAGSAAQAPPIAAA86 pKa = 4.08
Molecular weight: 9.62 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.789
IPC2_protein 3.605
IPC_protein 3.579
Toseland 3.363
ProMoST 3.783
Dawson 3.592
Bjellqvist 3.757
Wikipedia 3.567
Rodwell 3.414
Grimsley 3.274
Solomon 3.567
Lehninger 3.528
Nozaki 3.719
DTASelect 3.961
Thurlkill 3.439
EMBOSS 3.567
Sillero 3.706
Patrickios 0.477
IPC_peptide 3.567
IPC2_peptide 3.681
IPC2.peptide.svr19 3.692
Protein with the highest isoelectric point:
>tr|A0A0B2WNK5|A0A0B2WNK5_METAS Uncharacterized protein OS=Metarhizium album (strain ARSEF 1941) OX=1081103 GN=MAM_06940 PE=4 SV=1
MM1 pKa = 7.5 SAPLRR6 pKa = 11.84 LPNTLPARR14 pKa = 11.84 PLRR17 pKa = 11.84 RR18 pKa = 11.84 PVTPSSSISISISISISVSVAIVVVVVVVVVVSLLSLLHH57 pKa = 6.29 RR58 pKa = 11.84 RR59 pKa = 11.84 SAGAALVRR67 pKa = 11.84 GVNGAITRR75 pKa = 11.84 GNRR78 pKa = 11.84 VSVLISRR85 pKa = 11.84 RR86 pKa = 11.84 RR87 pKa = 11.84 FPLVSSSAAAGG98 pKa = 3.41
Molecular weight: 10.13 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.525
IPC2_protein 11.272
IPC_protein 12.881
Toseland 13.042
ProMoST 13.539
Dawson 13.042
Bjellqvist 13.042
Wikipedia 13.525
Rodwell 12.544
Grimsley 13.086
Solomon 13.539
Lehninger 13.437
Nozaki 13.042
DTASelect 13.042
Thurlkill 13.042
EMBOSS 13.539
Sillero 13.042
Patrickios 12.281
IPC_peptide 13.539
IPC2_peptide 12.53
IPC2.peptide.svr19 9.236
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
8389
0
8389
4223730
50
10302
503.5
55.49
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
9.312 ± 0.026
1.264 ± 0.011
5.948 ± 0.019
5.941 ± 0.028
3.512 ± 0.015
7.147 ± 0.025
2.465 ± 0.011
4.368 ± 0.015
4.701 ± 0.024
8.781 ± 0.027
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.208 ± 0.01
3.421 ± 0.013
6.109 ± 0.027
4.04 ± 0.021
6.661 ± 0.026
8.149 ± 0.028
5.674 ± 0.018
6.346 ± 0.018
1.407 ± 0.011
2.544 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here