Cacao swollen shoot virus
Average proteome isoelectric point is 7.43
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|Q66234|Q66234_9VIRU Polyprotein OS=Cacao swollen shoot virus OX=31559 PE=4 SV=1
MM1 pKa = 7.43 SRR3 pKa = 11.84 ARR5 pKa = 11.84 PQHH8 pKa = 5.78 PVPSVTTTTSEE19 pKa = 4.08 QNRR22 pKa = 11.84 EE23 pKa = 3.76 GPLYY27 pKa = 10.07 EE28 pKa = 4.46 DD29 pKa = 3.78 QIRR32 pKa = 11.84 DD33 pKa = 3.39 YY34 pKa = 11.24 RR35 pKa = 11.84 RR36 pKa = 11.84 GQRR39 pKa = 11.84 RR40 pKa = 11.84 IFNLRR45 pKa = 11.84 RR46 pKa = 11.84 RR47 pKa = 11.84 ARR49 pKa = 11.84 RR50 pKa = 11.84 LRR52 pKa = 11.84 RR53 pKa = 11.84 SMMGSRR59 pKa = 11.84 YY60 pKa = 9.36 QEE62 pKa = 4.04 TLEE65 pKa = 4.9 QEE67 pKa = 4.0 IDD69 pKa = 3.51 PQTTLRR75 pKa = 11.84 LSMQEE80 pKa = 3.83 RR81 pKa = 11.84 ARR83 pKa = 11.84 LVPAEE88 pKa = 3.72 VLYY91 pKa = 10.53 RR92 pKa = 11.84 SRR94 pKa = 11.84 RR95 pKa = 11.84 DD96 pKa = 3.64 TVHH99 pKa = 6.24 HH100 pKa = 6.09 RR101 pKa = 11.84 VYY103 pKa = 9.45 THH105 pKa = 6.92 RR106 pKa = 11.84 SEE108 pKa = 4.93 EE109 pKa = 4.21 SVLCVGGSQVDD120 pKa = 3.48 RR121 pKa = 11.84 AFIQPEE127 pKa = 4.25 SLEE130 pKa = 3.97 QLQRR134 pKa = 11.84 TGMSFIHH141 pKa = 7.37 IGILQVRR148 pKa = 11.84 IQILHH153 pKa = 5.5 RR154 pKa = 11.84 QEE156 pKa = 4.41 EE157 pKa = 4.89 GTMALVVFRR166 pKa = 11.84 DD167 pKa = 3.85 NRR169 pKa = 11.84 WSGDD173 pKa = 3.33 QSIFAQMEE181 pKa = 3.65 IDD183 pKa = 3.68 LTKK186 pKa = 10.65 GSQLVFVIPDD196 pKa = 3.28 TMMTIGDD203 pKa = 4.31 FARR206 pKa = 11.84 NVQLSILTRR215 pKa = 11.84 GYY217 pKa = 10.9 EE218 pKa = 3.57 NWQNGEE224 pKa = 4.13 ANLLITRR231 pKa = 11.84 GMTGRR236 pKa = 11.84 LSNTPNVAFAYY247 pKa = 10.0 QIASATDD254 pKa = 3.39 YY255 pKa = 10.85 LASHH259 pKa = 6.4 GVKK262 pKa = 10.47 AIAGKK267 pKa = 10.44 KK268 pKa = 9.28 MNLQHH273 pKa = 6.88 LRR275 pKa = 11.84 NQQWILRR282 pKa = 11.84 PPQTDD287 pKa = 3.06 ITPMQPRR294 pKa = 11.84 SVEE297 pKa = 3.82 TRR299 pKa = 11.84 NLVDD303 pKa = 3.54 GSISIRR309 pKa = 11.84 FHH311 pKa = 7.72 DD312 pKa = 4.32 YY313 pKa = 10.25 EE314 pKa = 4.81 AATSASRR321 pKa = 11.84 PHH323 pKa = 7.11 YY324 pKa = 10.17 NEE326 pKa = 3.58 EE327 pKa = 4.11 DD328 pKa = 3.73 EE329 pKa = 4.58 EE330 pKa = 4.79 VEE332 pKa = 4.69 SEE334 pKa = 4.33 TEE336 pKa = 3.95 SEE338 pKa = 4.09 IRR340 pKa = 11.84 EE341 pKa = 3.96 HH342 pKa = 6.93 TIAVWIGEE350 pKa = 4.25 EE351 pKa = 4.36 EE352 pKa = 4.43 IPDD355 pKa = 3.21 QTGRR359 pKa = 11.84 KK360 pKa = 8.8 KK361 pKa = 10.58 VWEE364 pKa = 4.15 EE365 pKa = 3.75 SSNGNGRR372 pKa = 11.84 FFRR375 pKa = 11.84 YY376 pKa = 7.28 YY377 pKa = 9.58 TPPPTFEE384 pKa = 3.99 GQIIATGWGSDD395 pKa = 3.97 DD396 pKa = 5.43 DD397 pKa = 4.7 NEE399 pKa = 4.24 KK400 pKa = 9.76 TPPKK404 pKa = 9.29 WDD406 pKa = 3.54 EE407 pKa = 4.29 SPDD410 pKa = 3.62 EE411 pKa = 4.58 EE412 pKa = 6.19 GPTEE416 pKa = 4.54 PIWDD420 pKa = 3.7 QEE422 pKa = 4.25 EE423 pKa = 4.49 EE424 pKa = 4.06 EE425 pKa = 5.42 DD426 pKa = 4.04 EE427 pKa = 4.29 YY428 pKa = 11.84 DD429 pKa = 3.65 PNVYY433 pKa = 9.68 RR434 pKa = 11.84 AYY436 pKa = 10.33 LQKK439 pKa = 11.07 EE440 pKa = 3.66 EE441 pKa = 5.67 DD442 pKa = 3.29 EE443 pKa = 4.34 WQEE446 pKa = 3.41 ITASLRR452 pKa = 11.84 EE453 pKa = 3.9 EE454 pKa = 3.76 MEE456 pKa = 4.11 YY457 pKa = 10.39 PKK459 pKa = 10.42 RR460 pKa = 11.84 RR461 pKa = 11.84 PQTEE465 pKa = 3.89 MAFSEE470 pKa = 4.75 TVDD473 pKa = 3.52 YY474 pKa = 9.39 TPPGDD479 pKa = 3.63 TMMTPVGYY487 pKa = 9.22 PPASSSRR494 pKa = 11.84 STVTTPSRR502 pKa = 11.84 PPLFEE507 pKa = 4.32 GRR509 pKa = 11.84 TTHH512 pKa = 6.03 VPRR515 pKa = 11.84 FLKK518 pKa = 10.24 RR519 pKa = 11.84 DD520 pKa = 3.62 EE521 pKa = 4.14 YY522 pKa = 10.2 TEE524 pKa = 3.6 WWQLPSSQGTTGALFVMPKK543 pKa = 10.3 QMGLFHH549 pKa = 6.84 EE550 pKa = 4.99 VFSRR554 pKa = 11.84 WEE556 pKa = 4.44 SITKK560 pKa = 10.39 NYY562 pKa = 9.79 VAAQGFTDD570 pKa = 3.76 PTEE573 pKa = 4.16 KK574 pKa = 10.13 MEE576 pKa = 4.86 FMEE579 pKa = 4.34 NLLGEE584 pKa = 4.52 TEE586 pKa = 4.16 KK587 pKa = 10.64 LTWIQWRR594 pKa = 11.84 MNYY597 pKa = 8.46 EE598 pKa = 3.77 AEE600 pKa = 4.15 YY601 pKa = 10.55 QQLLTQADD609 pKa = 4.14 GRR611 pKa = 11.84 QGTQNILSQIKK622 pKa = 10.24 RR623 pKa = 11.84 IFSLEE628 pKa = 4.03 DD629 pKa = 3.27 PASGSTRR636 pKa = 11.84 IQDD639 pKa = 3.19 AAYY642 pKa = 10.28 RR643 pKa = 11.84 DD644 pKa = 4.11 LEE646 pKa = 4.16 RR647 pKa = 11.84 LTCHH651 pKa = 6.56 NIKK654 pKa = 10.8 DD655 pKa = 3.51 IVQFLNDD662 pKa = 3.88 YY663 pKa = 10.49 GRR665 pKa = 11.84 LAAKK669 pKa = 10.01 SGRR672 pKa = 11.84 LFLGTEE678 pKa = 4.16 LSEE681 pKa = 4.29 KK682 pKa = 10.33 LWMKK686 pKa = 8.98 MPPEE690 pKa = 4.44 LGHH693 pKa = 6.26 RR694 pKa = 11.84 MKK696 pKa = 10.8 EE697 pKa = 4.09 AFQKK701 pKa = 10.17 EE702 pKa = 4.21 YY703 pKa = 10.85 SGNEE707 pKa = 3.54 VGVFPRR713 pKa = 11.84 ILFAYY718 pKa = 9.75 RR719 pKa = 11.84 YY720 pKa = 9.91 LEE722 pKa = 4.09 QEE724 pKa = 4.52 CKK726 pKa = 10.38 DD727 pKa = 3.55 AAFKK731 pKa = 10.82 RR732 pKa = 11.84 SLKK735 pKa = 10.67 SLSFCKK741 pKa = 10.45 DD742 pKa = 3.11 MPLTGYY748 pKa = 10.1 YY749 pKa = 10.6 DD750 pKa = 3.46 KK751 pKa = 10.82 TSKK754 pKa = 11.02 YY755 pKa = 10.86 GMRR758 pKa = 11.84 KK759 pKa = 8.81 SRR761 pKa = 11.84 TYY763 pKa = 10.1 KK764 pKa = 10.25 GKK766 pKa = 8.9 PHH768 pKa = 6.98 ASHH771 pKa = 6.77 ARR773 pKa = 11.84 VEE775 pKa = 4.34 KK776 pKa = 10.38 RR777 pKa = 11.84 KK778 pKa = 9.85 HH779 pKa = 5.53 LIRR782 pKa = 11.84 NKK784 pKa = 9.94 KK785 pKa = 8.39 CKK787 pKa = 10.09 CYY789 pKa = 10.1 LCGDD793 pKa = 3.79 EE794 pKa = 4.53 GHH796 pKa = 7.05 FARR799 pKa = 11.84 EE800 pKa = 4.28 CPNQRR805 pKa = 11.84 RR806 pKa = 11.84 DD807 pKa = 3.5 VKK809 pKa = 10.53 RR810 pKa = 11.84 VAIFEE815 pKa = 5.09 GIDD818 pKa = 3.39 LPEE821 pKa = 4.86 GFDD824 pKa = 3.03 IVSVEE829 pKa = 4.01 EE830 pKa = 4.52 GEE832 pKa = 4.46 EE833 pKa = 4.03 EE834 pKa = 3.8 SDD836 pKa = 3.72 AIYY839 pKa = 10.51 SISEE843 pKa = 4.15 NEE845 pKa = 4.36 DD846 pKa = 3.31 GEE848 pKa = 5.02 LDD850 pKa = 3.7 TEE852 pKa = 4.73 VVHH855 pKa = 6.65 EE856 pKa = 4.5 KK857 pKa = 10.53 VFMMRR862 pKa = 11.84 EE863 pKa = 3.84 EE864 pKa = 4.29 DD865 pKa = 3.21 QSYY868 pKa = 8.13 WLGKK872 pKa = 7.33 TNHH875 pKa = 4.78 WTAMVRR881 pKa = 11.84 VSSQQYY887 pKa = 8.83 HH888 pKa = 6.78 CMHH891 pKa = 5.82 QWEE894 pKa = 4.72 HH895 pKa = 5.64 NKK897 pKa = 10.3 EE898 pKa = 4.12 ILVVAHH904 pKa = 6.75 INCHH908 pKa = 5.1 FCKK911 pKa = 10.42 QPTQLRR917 pKa = 11.84 SRR919 pKa = 11.84 IHH921 pKa = 7.02 CPTCQLTSCFMCAPIYY937 pKa = 10.83 CNMIVQQQPKK947 pKa = 9.76 PPVPFNTHH955 pKa = 5.3 TLLQQQAAYY964 pKa = 9.01 IQWLEE969 pKa = 4.2 KK970 pKa = 10.33 EE971 pKa = 4.27 NQRR974 pKa = 11.84 LTEE977 pKa = 3.82 AVEE980 pKa = 4.75 FYY982 pKa = 10.82 KK983 pKa = 10.75 KK984 pKa = 9.97 EE985 pKa = 4.04 AEE987 pKa = 4.12 EE988 pKa = 4.1 LRR990 pKa = 11.84 LEE992 pKa = 4.66 RR993 pKa = 11.84 DD994 pKa = 3.27 LEE996 pKa = 3.9 QDD998 pKa = 3.27 RR999 pKa = 11.84 RR1000 pKa = 11.84 SLEE1003 pKa = 3.74 PTLLDD1008 pKa = 3.41 KK1009 pKa = 11.19 GKK1011 pKa = 10.21 KK1012 pKa = 8.41 VQILDD1017 pKa = 3.8 PDD1019 pKa = 4.16 EE1020 pKa = 5.0 DD1021 pKa = 3.51 QHH1023 pKa = 5.77 TAYY1026 pKa = 10.79 LEE1028 pKa = 4.04 EE1029 pKa = 4.34 DD1030 pKa = 3.65 TISRR1034 pKa = 11.84 VIGHH1038 pKa = 5.81 TVEE1041 pKa = 4.0 QQEE1044 pKa = 3.95 VRR1046 pKa = 11.84 KK1047 pKa = 8.56 PVKK1050 pKa = 9.85 KK1051 pKa = 10.91 GNMLYY1056 pKa = 10.62 NLDD1059 pKa = 3.99 VVLHH1063 pKa = 5.98 IPEE1066 pKa = 3.89 VGRR1069 pKa = 11.84 PIKK1072 pKa = 10.69 VKK1074 pKa = 10.85 AILDD1078 pKa = 3.79 TGATTCCININSVPQTAIEE1097 pKa = 4.1 QNTFLVQFRR1106 pKa = 11.84 GINSTQSVDD1115 pKa = 3.17 KK1116 pKa = 10.02 KK1117 pKa = 10.68 LKK1119 pKa = 8.11 YY1120 pKa = 10.97 GRR1122 pKa = 11.84 MTISNHH1128 pKa = 4.52 QFRR1131 pKa = 11.84 IPYY1134 pKa = 9.55 CYY1136 pKa = 10.45 AFPLSLGDD1144 pKa = 4.26 GIEE1147 pKa = 4.53 MILGCNFIRR1156 pKa = 11.84 GMYY1159 pKa = 9.72 GGLRR1163 pKa = 11.84 IEE1165 pKa = 4.23 GHH1167 pKa = 6.42 TITFYY1172 pKa = 11.64 KK1173 pKa = 10.57 NVTTIQTRR1181 pKa = 11.84 LAAVMVGGTTASEE1194 pKa = 4.07 LGGGEE1199 pKa = 4.1 EE1200 pKa = 4.39 SKK1202 pKa = 11.08 SDD1204 pKa = 3.79 SEE1206 pKa = 5.26 SMFDD1210 pKa = 4.01 LSEE1213 pKa = 4.17 TEE1215 pKa = 4.23 EE1216 pKa = 4.38 FDD1218 pKa = 5.23 SEE1220 pKa = 4.29 THH1222 pKa = 4.54 QQIVSHH1228 pKa = 6.3 VAAQAQQQKK1237 pKa = 10.52 LDD1239 pKa = 3.88 PKK1241 pKa = 9.94 LQQLMVQLQDD1251 pKa = 3.11 QGFIGEE1257 pKa = 4.55 NPMQHH1262 pKa = 5.28 WAKK1265 pKa = 11.02 NKK1267 pKa = 9.48 ILCRR1271 pKa = 11.84 LDD1273 pKa = 3.24 IKK1275 pKa = 11.29 NPDD1278 pKa = 4.46 LIIEE1282 pKa = 4.64 DD1283 pKa = 4.31 KK1284 pKa = 10.36 PIKK1287 pKa = 10.27 HH1288 pKa = 6.12 LTPAMEE1294 pKa = 4.24 KK1295 pKa = 10.23 QFQKK1299 pKa = 10.56 HH1300 pKa = 5.15 IKK1302 pKa = 9.15 ALLDD1306 pKa = 3.15 IGVIRR1311 pKa = 11.84 PSKK1314 pKa = 9.8 SKK1316 pKa = 10.45 HH1317 pKa = 4.3 RR1318 pKa = 11.84 TTAFIVEE1325 pKa = 4.63 SGTVIDD1331 pKa = 4.7 PVTKK1335 pKa = 9.38 KK1336 pKa = 9.07 TIHH1339 pKa = 5.38 GKK1341 pKa = 9.21 EE1342 pKa = 3.61 RR1343 pKa = 11.84 LVFNYY1348 pKa = 9.57 KK1349 pKa = 10.11 RR1350 pKa = 11.84 LNDD1353 pKa = 3.67 NTEE1356 pKa = 3.67 KK1357 pKa = 10.83 DD1358 pKa = 3.75 QYY1360 pKa = 10.71 SLPGIQTILKK1370 pKa = 9.61 RR1371 pKa = 11.84 VGNKK1375 pKa = 9.48 KK1376 pKa = 10.01 VFSKK1380 pKa = 10.97 FDD1382 pKa = 3.82 LKK1384 pKa = 11.3 SGFHH1388 pKa = 4.87 QVAMAEE1394 pKa = 4.28 EE1395 pKa = 4.8 SIPWTAFWVPQGLYY1409 pKa = 9.06 EE1410 pKa = 4.1 WLVMPFGLKK1419 pKa = 9.49 NAPAVFQRR1427 pKa = 11.84 KK1428 pKa = 7.79 MDD1430 pKa = 3.49 QCFKK1434 pKa = 10.16 GTEE1437 pKa = 3.97 EE1438 pKa = 4.6 FIAVYY1443 pKa = 10.11 IDD1445 pKa = 4.96 DD1446 pKa = 3.78 ILVFSEE1452 pKa = 4.34 NMAEE1456 pKa = 4.17 HH1457 pKa = 6.47 TKK1459 pKa = 10.62 HH1460 pKa = 6.5 IGIMLKK1466 pKa = 9.4 ICQEE1470 pKa = 4.01 NGLVLSPSKK1479 pKa = 10.47 ICLAQRR1485 pKa = 11.84 EE1486 pKa = 4.52 IEE1488 pKa = 4.11 FLGTVISQGQMKK1500 pKa = 9.93 LQAHH1504 pKa = 6.27 VIKK1507 pKa = 10.8 KK1508 pKa = 9.59 IVNKK1512 pKa = 10.52 ANIEE1516 pKa = 4.11 LEE1518 pKa = 4.32 TTKK1521 pKa = 10.84 GLRR1524 pKa = 11.84 SFLGLLNYY1532 pKa = 10.15 ARR1534 pKa = 11.84 IYY1536 pKa = 10.34 IPNLGRR1542 pKa = 11.84 KK1543 pKa = 9.28 LSPLYY1548 pKa = 10.92 AKK1550 pKa = 9.27 TSPTGEE1556 pKa = 3.95 KK1557 pKa = 10.28 RR1558 pKa = 11.84 FNRR1561 pKa = 11.84 QDD1563 pKa = 2.44 WHH1565 pKa = 6.71 LIKK1568 pKa = 10.31 EE1569 pKa = 4.36 IKK1571 pKa = 10.8 DD1572 pKa = 3.61 MVQKK1576 pKa = 10.71 LPNLAIPPARR1586 pKa = 11.84 CYY1588 pKa = 10.44 IIIEE1592 pKa = 4.14 SDD1594 pKa = 2.99 GCMEE1598 pKa = 4.25 GWGAVCKK1605 pKa = 9.92 WKK1607 pKa = 10.17 LAKK1610 pKa = 9.94 EE1611 pKa = 4.16 DD1612 pKa = 3.49 SRR1614 pKa = 11.84 TTEE1617 pKa = 4.32 KK1618 pKa = 10.18 ICAYY1622 pKa = 10.28 ASGKK1626 pKa = 10.3 FGVVKK1631 pKa = 9.68 STIDD1635 pKa = 3.3 AEE1637 pKa = 4.31 IYY1639 pKa = 11.0 ALIKK1643 pKa = 10.51 ALEE1646 pKa = 4.19 SFKK1649 pKa = 10.78 IFYY1652 pKa = 10.16 LDD1654 pKa = 3.32 KK1655 pKa = 9.98 KK1656 pKa = 9.4 HH1657 pKa = 6.57 LVVRR1661 pKa = 11.84 TDD1663 pKa = 3.22 CQAIVTFYY1671 pKa = 11.41 NKK1673 pKa = 9.85 TSTHH1677 pKa = 5.58 KK1678 pKa = 10.05 PSRR1681 pKa = 11.84 IRR1683 pKa = 11.84 WITFSDD1689 pKa = 4.75 YY1690 pKa = 9.98 ITGLGVPVTIEE1701 pKa = 4.39 HH1702 pKa = 7.11 IDD1704 pKa = 3.53 GKK1706 pKa = 10.5 EE1707 pKa = 3.78 NQLADD1712 pKa = 3.61 TLSRR1716 pKa = 11.84 LVYY1719 pKa = 7.25 TTWNQSQTHH1728 pKa = 4.47 QPEE1731 pKa = 4.15 EE1732 pKa = 4.2 EE1733 pKa = 4.05 EE1734 pKa = 4.48 LEE1736 pKa = 4.34 KK1737 pKa = 11.06 SQHH1740 pKa = 6.05 LSFAGLAIPIAWPMMGSYY1758 pKa = 10.48 NKK1760 pKa = 9.84 RR1761 pKa = 11.84 RR1762 pKa = 11.84 TPLLTGQSLWQRR1774 pKa = 11.84 NKK1776 pKa = 10.06 PSQHH1780 pKa = 6.43 SSTASKK1786 pKa = 10.33 SRR1788 pKa = 11.84 QPRR1791 pKa = 11.84 KK1792 pKa = 10.08 HH1793 pKa = 5.03 YY1794 pKa = 9.17 WPYY1797 pKa = 7.87 VTYY1800 pKa = 10.3 RR1801 pKa = 11.84 AYY1803 pKa = 9.25 STSRR1807 pKa = 11.84 EE1808 pKa = 4.47 TIWPLLPLEE1817 pKa = 4.46 TTGLATDD1824 pKa = 3.84 CQLPNKK1830 pKa = 7.16 TQPPP1834 pKa = 3.79
Molecular weight: 211.39 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.41
IPC2_protein 6.465
IPC_protein 6.504
Toseland 6.678
ProMoST 6.956
Dawson 6.898
Bjellqvist 6.927
Wikipedia 6.898
Rodwell 6.898
Grimsley 6.81
Solomon 6.898
Lehninger 6.912
Nozaki 7.22
DTASelect 7.307
Thurlkill 7.337
EMBOSS 7.322
Sillero 7.307
Patrickios 4.355
IPC_peptide 6.912
IPC2_peptide 6.971
IPC2.peptide.svr19 6.855
Protein with the highest isoelectric point:
>tr|Q66235|Q66235_9VIRU Polyprotein OS=Cacao swollen shoot virus OX=31559 PE=4 SV=1
MM1 pKa = 7.38 EE2 pKa = 5.17 MEE4 pKa = 4.97 DD5 pKa = 3.43 SSGITLLHH13 pKa = 5.34 QHH15 pKa = 6.79 LKK17 pKa = 10.69 GKK19 pKa = 10.23 SLLQDD24 pKa = 3.81 GEE26 pKa = 4.45 VMMIMKK32 pKa = 10.42 KK33 pKa = 10.34 LLQNGMKK40 pKa = 10.33 AQMKK44 pKa = 9.97 KK45 pKa = 10.56 DD46 pKa = 3.44 PQNPYY51 pKa = 10.44 GIKK54 pKa = 10.0 KK55 pKa = 8.42 KK56 pKa = 10.71 KK57 pKa = 8.39 KK58 pKa = 7.93 MNMIPMSIGHH68 pKa = 5.31 TYY70 pKa = 10.27 KK71 pKa = 10.19 RR72 pKa = 11.84 RR73 pKa = 11.84 KK74 pKa = 9.07 MSGKK78 pKa = 9.96 KK79 pKa = 9.37 SQLVSGKK86 pKa = 9.7 KK87 pKa = 8.92 WSTQKK92 pKa = 10.82 DD93 pKa = 3.36 DD94 pKa = 3.86 HH95 pKa = 5.8 KK96 pKa = 11.22 QRR98 pKa = 11.84 WRR100 pKa = 11.84 SLKK103 pKa = 10.26 QSTILHH109 pKa = 6.57 LVTLL113 pKa = 4.75
Molecular weight: 13.15 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.097
IPC2_protein 9.663
IPC_protein 9.575
Toseland 10.745
ProMoST 10.16
Dawson 10.804
Bjellqvist 10.35
Wikipedia 10.877
Rodwell 11.608
Grimsley 10.818
Solomon 10.833
Lehninger 10.818
Nozaki 10.701
DTASelect 10.35
Thurlkill 10.701
EMBOSS 11.111
Sillero 10.716
Patrickios 11.33
IPC_peptide 10.847
IPC2_peptide 8.639
IPC2.peptide.svr19 8.625
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5
0
5
2353
113
1834
470.6
53.99
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.907 ± 1.811
1.317 ± 0.533
4.59 ± 0.298
8.245 ± 0.891
3.102 ± 0.843
5.44 ± 0.551
2.677 ± 0.437
6.332 ± 0.305
7.48 ± 2.095
8.457 ± 1.19
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.762 ± 0.73
3.442 ± 0.452
4.845 ± 0.668
6.502 ± 0.63
6.035 ± 0.839
6.077 ± 0.602
6.757 ± 0.377
5.227 ± 0.511
1.615 ± 0.296
3.187 ± 0.523
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here