Simian mastadenovirus C

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus

Average proteome isoelectric point is 6.75

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 36 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|M9YVL4|M9YVL4_9ADEN E4 ORF1 OS=Simian mastadenovirus C OX=1962300 PE=4 SV=1
MM1 pKa = 7.52RR2 pKa = 11.84LVPEE6 pKa = 4.41MYY8 pKa = 10.14GVSWDD13 pKa = 3.59EE14 pKa = 4.01TAEE17 pKa = 3.96EE18 pKa = 4.23LLNAEE23 pKa = 4.83IYY25 pKa = 10.11DD26 pKa = 4.05VPNLPPGTPSLHH38 pKa = 7.41DD39 pKa = 4.21LFDD42 pKa = 3.62VEE44 pKa = 5.13NDD46 pKa = 3.38GGQDD50 pKa = 3.47EE51 pKa = 5.45NEE53 pKa = 4.19DD54 pKa = 3.86AVNSMFPDD62 pKa = 3.36SMLSAGEE69 pKa = 4.74GYY71 pKa = 10.83AGDD74 pKa = 4.04VDD76 pKa = 4.34PSGSDD81 pKa = 3.15MDD83 pKa = 4.33LKK85 pKa = 10.81CYY87 pKa = 10.45EE88 pKa = 5.14DD89 pKa = 4.41GLPSSSSEE97 pKa = 3.88GSDD100 pKa = 3.22EE101 pKa = 5.93DD102 pKa = 3.53EE103 pKa = 4.28QKK105 pKa = 10.6PLKK108 pKa = 10.43HH109 pKa = 6.36EE110 pKa = 4.44LVLDD114 pKa = 3.97CPKK117 pKa = 11.0NPGHH121 pKa = 7.25DD122 pKa = 3.36CRR124 pKa = 11.84ACAFHH129 pKa = 7.29RR130 pKa = 11.84ATSGNTEE137 pKa = 4.86AICCLCYY144 pKa = 9.94MRR146 pKa = 11.84LTSDD150 pKa = 3.87FVYY153 pKa = 10.99SDD155 pKa = 3.48VSDD158 pKa = 3.93VEE160 pKa = 4.2GDD162 pKa = 3.42GDD164 pKa = 3.59KK165 pKa = 11.38SKK167 pKa = 11.04VSEE170 pKa = 4.46SPGSLGTVVPDD181 pKa = 3.89GVLKK185 pKa = 8.9PTAVRR190 pKa = 11.84VSARR194 pKa = 11.84RR195 pKa = 11.84RR196 pKa = 11.84QAVEE200 pKa = 3.77KK201 pKa = 11.15LEE203 pKa = 5.37DD204 pKa = 3.72LLQEE208 pKa = 4.36PEE210 pKa = 3.97QTEE213 pKa = 4.14PLDD216 pKa = 4.63LSLKK220 pKa = 8.2QPRR223 pKa = 11.84MTT225 pKa = 4.26

Molecular weight: 24.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|M9YVE2|M9YVE2_9ADEN Shutoff protein OS=Simian mastadenovirus C OX=1962300 GN=L4 PE=2 SV=1
MM1 pKa = 7.74ALTCRR6 pKa = 11.84VRR8 pKa = 11.84IPVPHH13 pKa = 5.34YY14 pKa = 9.86RR15 pKa = 11.84GRR17 pKa = 11.84TRR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84GMAGSGRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84ALRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84MKK38 pKa = 10.81GGILPALIPIIAAAIGAIPGIASVAVQASRR68 pKa = 11.84KK69 pKa = 9.21

Molecular weight: 7.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

31

5

36

11419

53

1185

317.2

35.67

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.636 ± 0.447

1.988 ± 0.312

4.773 ± 0.248

6.078 ± 0.555

3.967 ± 0.236

5.99 ± 0.263

2.154 ± 0.233

3.862 ± 0.198

3.766 ± 0.331

9.87 ± 0.539

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.391 ± 0.165

4.685 ± 0.498

6.612 ± 0.311

4.256 ± 0.236

7.444 ± 0.591

7.102 ± 0.363

5.771 ± 0.326

6.769 ± 0.351

1.322 ± 0.109

3.564 ± 0.264
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski