Jeotgalibaca porci

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Jeotgalibaca

Average proteome isoelectric point is 5.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2201 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6G7WF22|A0A6G7WF22_9LACT Flotillin family protein OS=Jeotgalibaca porci OX=1868793 GN=G7058_01520 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 10.46KK3 pKa = 10.23SVLSLLSTVSLLTLLTACGGGEE25 pKa = 4.14TEE27 pKa = 4.36EE28 pKa = 4.3QEE30 pKa = 4.63SVTRR34 pKa = 11.84TDD36 pKa = 3.1GTTEE40 pKa = 3.75TSEE43 pKa = 4.32TADD46 pKa = 3.44STEE49 pKa = 4.14TASGGSVYY57 pKa = 10.86YY58 pKa = 10.99LNFKK62 pKa = 10.45PEE64 pKa = 3.65IADD67 pKa = 4.31AIEE70 pKa = 4.79DD71 pKa = 3.66LAEE74 pKa = 4.7AYY76 pKa = 9.39TEE78 pKa = 4.09EE79 pKa = 4.32TGVEE83 pKa = 4.18VKK85 pKa = 9.93MVTAAGGTYY94 pKa = 9.41EE95 pKa = 4.04QTLKK99 pKa = 11.16SEE101 pKa = 4.44ITKK104 pKa = 10.16SAPPTIFFINGPIGYY119 pKa = 8.76QNWQDD124 pKa = 3.69YY125 pKa = 8.81TLDD128 pKa = 3.84LADD131 pKa = 3.59TDD133 pKa = 4.14VYY135 pKa = 11.63DD136 pKa = 3.64WLVDD140 pKa = 3.34KK141 pKa = 11.15DD142 pKa = 4.03LAITGADD149 pKa = 3.72DD150 pKa = 3.58SVAAIPITVEE160 pKa = 4.15GYY162 pKa = 10.73GIIYY166 pKa = 9.74NAAIMEE172 pKa = 4.89DD173 pKa = 4.64YY174 pKa = 10.51FALDD178 pKa = 3.24NKK180 pKa = 9.98ATDD183 pKa = 3.94FDD185 pKa = 4.62SVDD188 pKa = 4.56DD189 pKa = 4.38INNFDD194 pKa = 3.71ALKK197 pKa = 10.58EE198 pKa = 4.18VVEE201 pKa = 5.4DD202 pKa = 3.6MTALKK207 pKa = 10.37DD208 pKa = 3.54DD209 pKa = 4.81LGIQGVFSSTSLASTDD225 pKa = 2.82QWRR228 pKa = 11.84WQTHH232 pKa = 5.39LANLPVYY239 pKa = 10.31YY240 pKa = 9.8EE241 pKa = 4.0YY242 pKa = 11.08RR243 pKa = 11.84DD244 pKa = 3.64ADD246 pKa = 3.69VDD248 pKa = 3.98TMSEE252 pKa = 4.04LTFKK256 pKa = 10.91YY257 pKa = 9.81GKK259 pKa = 9.88QYY261 pKa = 11.43QNIFDD266 pKa = 5.09LYY268 pKa = 10.72INNSTNAPGLLGAKK282 pKa = 6.63TTTDD286 pKa = 2.8SMTEE290 pKa = 3.78FALGQSAMVQNGNWGWGQISGTEE313 pKa = 3.92GNVVNEE319 pKa = 4.22EE320 pKa = 4.47DD321 pKa = 3.84VHH323 pKa = 7.04FMPIYY328 pKa = 9.48TGVEE332 pKa = 3.93GEE334 pKa = 4.34EE335 pKa = 4.03NQGLAIGTEE344 pKa = 3.63NFMAVNSQASEE355 pKa = 3.93EE356 pKa = 4.71DD357 pKa = 3.22IQASLDD363 pKa = 3.91FIEE366 pKa = 4.48WMYY369 pKa = 11.44SSEE372 pKa = 4.1TGKK375 pKa = 10.63DD376 pKa = 3.36YY377 pKa = 11.42VVNQFGFIPTFNTFGEE393 pKa = 4.73DD394 pKa = 3.61EE395 pKa = 4.84FPTDD399 pKa = 4.11PLAQDD404 pKa = 3.9VLGSMNDD411 pKa = 3.13EE412 pKa = 4.51SKK414 pKa = 11.47YY415 pKa = 9.48SVPWTFTTFPSEE427 pKa = 3.83AFKK430 pKa = 11.41NDD432 pKa = 3.33FGNGLLMYY440 pKa = 10.4AQDD443 pKa = 3.26QATWDD448 pKa = 3.73EE449 pKa = 4.52VEE451 pKa = 4.42TTVVDD456 pKa = 3.99AWARR460 pKa = 11.84EE461 pKa = 3.98AALTQQQ467 pKa = 3.58

Molecular weight: 51.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6G7WH95|A0A6G7WH95_9LACT Flagellar hook-associated protein 2 OS=Jeotgalibaca porci OX=1868793 GN=fliD PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.6RR3 pKa = 11.84TFQPKK8 pKa = 8.32KK9 pKa = 9.49RR10 pKa = 11.84KK11 pKa = 8.83RR12 pKa = 11.84QTVHH16 pKa = 6.23GFRR19 pKa = 11.84KK20 pKa = 10.06RR21 pKa = 11.84MSTKK25 pKa = 10.02NGRR28 pKa = 11.84NVLASRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.73GRR39 pKa = 11.84KK40 pKa = 8.76VLSAA44 pKa = 4.05

Molecular weight: 5.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2201

0

2201

663762

27

1756

301.6

33.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.427 ± 0.05

0.531 ± 0.013

5.459 ± 0.039

7.759 ± 0.062

4.446 ± 0.041

6.658 ± 0.046

1.927 ± 0.025

7.62 ± 0.052

6.252 ± 0.045

9.59 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.891 ± 0.025

4.642 ± 0.035

3.476 ± 0.025

3.68 ± 0.034

4.186 ± 0.036

5.794 ± 0.033

5.981 ± 0.038

7.042 ± 0.042

0.921 ± 0.02

3.717 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski