Camel associated drosmacovirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Drosmacovirus

Average proteome isoelectric point is 6.35

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A1EKU7|A0A0A1EKU7_9VIRU Uncharacterized protein OS=Camel associated drosmacovirus 1 OX=2169876 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.98DD2 pKa = 4.79IEE4 pKa = 5.05GLTDD8 pKa = 3.75PLGVSDD14 pKa = 3.94TMGAEE19 pKa = 4.08GGEE22 pKa = 4.21MVTVSIEE29 pKa = 3.86EE30 pKa = 4.34MYY32 pKa = 11.77DD33 pKa = 3.02MATSLNKK40 pKa = 9.87IGIIGIHH47 pKa = 5.67TPNLGQIARR56 pKa = 11.84RR57 pKa = 11.84WAGLMINHH65 pKa = 7.1KK66 pKa = 8.62FLRR69 pKa = 11.84VKK71 pKa = 10.62SCDD74 pKa = 3.21VHH76 pKa = 6.4LACASMLPADD86 pKa = 4.53PLQIGTTTGTIAPQDD101 pKa = 3.55MMNPLLYY108 pKa = 10.0RR109 pKa = 11.84AVSNEE114 pKa = 3.16SWNAFTSRR122 pKa = 11.84LFATSGASVNQNSVKK137 pKa = 10.34VFTEE141 pKa = 4.13EE142 pKa = 4.99FSTQSDD148 pKa = 3.75EE149 pKa = 4.36NNEE152 pKa = 4.1KK153 pKa = 10.05IYY155 pKa = 11.2YY156 pKa = 9.13NALSEE161 pKa = 4.56PGWKK165 pKa = 9.73KK166 pKa = 10.69AFPQSGLDD174 pKa = 3.5INGLKK179 pKa = 10.18PLVYY183 pKa = 10.04PILTQFGNGEE193 pKa = 3.81AGINNFGLLGSSVQATTPAGNPTTVTNPTTGTAQLDD229 pKa = 3.36NARR232 pKa = 11.84YY233 pKa = 9.06FRR235 pKa = 11.84GKK237 pKa = 8.9AQPMPRR243 pKa = 11.84FPTSYY248 pKa = 9.83PYY250 pKa = 11.22VSTDD254 pKa = 2.82TGSTVGDD261 pKa = 3.27TWTLMFQDD269 pKa = 4.76SYY271 pKa = 11.29QIPRR275 pKa = 11.84TYY277 pKa = 9.88VACILTPPGKK287 pKa = 10.2LIKK290 pKa = 10.22FYY292 pKa = 10.93YY293 pKa = 9.61RR294 pKa = 11.84LRR296 pKa = 11.84IVWYY300 pKa = 9.84IEE302 pKa = 3.7FSDD305 pKa = 3.59MCTATEE311 pKa = 3.83RR312 pKa = 11.84VVGNSMVTAGNYY324 pKa = 9.8AYY326 pKa = 10.41SRR328 pKa = 11.84QYY330 pKa = 9.91TIPEE334 pKa = 4.14AVSSKK339 pKa = 9.5LTEE342 pKa = 4.71DD343 pKa = 3.38STLVTDD349 pKa = 3.95SDD351 pKa = 4.81LVSEE355 pKa = 5.33DD356 pKa = 4.52DD357 pKa = 4.73DD358 pKa = 4.71NSATAVNMVLDD369 pKa = 3.9KK370 pKa = 11.56VMEE373 pKa = 4.22KK374 pKa = 10.84

Molecular weight: 40.93 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A1EL55|A0A0A1EL55_9VIRU Putative replicase protein OS=Camel associated drosmacovirus 1 OX=2169876 GN=rep PE=4 SV=1
MM1 pKa = 7.11SWSYY5 pKa = 10.86LYY7 pKa = 9.94WGQNVARR14 pKa = 11.84NSPSWTKK21 pKa = 11.18GNTNQWRR28 pKa = 11.84YY29 pKa = 10.06NMSGVPFVGDD39 pKa = 4.24WIRR42 pKa = 11.84AADD45 pKa = 3.7QNQWRR50 pKa = 11.84QDD52 pKa = 3.31YY53 pKa = 9.18MDD55 pKa = 4.0NYY57 pKa = 9.37GVGWEE62 pKa = 4.1DD63 pKa = 3.0VKK65 pKa = 11.26YY66 pKa = 10.46PSMVPGAGSYY76 pKa = 10.53AHH78 pKa = 7.29ASTNLIAGSGIVSKK92 pKa = 11.02NLLGLYY98 pKa = 10.2RR99 pKa = 11.84SGRR102 pKa = 11.84PYY104 pKa = 10.43KK105 pKa = 10.24AVPRR109 pKa = 11.84GGRR112 pKa = 11.84SVYY115 pKa = 10.56NRR117 pKa = 3.54

Molecular weight: 13.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

752

117

374

250.7

28.29

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.984 ± 0.954

1.064 ± 0.218

5.718 ± 0.339

5.452 ± 1.229

3.191 ± 0.423

7.979 ± 0.722

1.33 ± 0.422

5.053 ± 0.451

5.319 ± 1.328

7.181 ± 0.531

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.59 ± 0.275

5.585 ± 0.735

5.452 ± 0.099

3.457 ± 0.175

4.787 ± 0.807

7.181 ± 1.051

7.314 ± 1.719

6.25 ± 0.517

3.059 ± 1.04

5.053 ± 0.656
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski