Amino acid dipepetide frequency for Camel associated drosmacovirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
1.332AlaAla: 1.332 ± 1.851
2.663AlaCys: 2.663 ± 1.746
3.995AlaAsp: 3.995 ± 1.242
2.663AlaGlu: 2.663 ± 0.736
2.663AlaPhe: 2.663 ± 1.746
7.989AlaGly: 7.989 ± 3.749
1.332AlaHis: 1.332 ± 1.851
0.0AlaIle: 0.0 ± 0.0
1.332AlaLys: 1.332 ± 1.141
2.663AlaLeu: 2.663 ± 0.736
1.332AlaMet: 1.332 ± 1.141
0.0AlaAsn: 0.0 ± 0.0
1.332AlaPro: 1.332 ± 0.873
2.663AlaGln: 2.663 ± 1.746
3.995AlaArg: 3.995 ± 1.875
3.995AlaSer: 3.995 ± 1.875
9.321AlaThr: 9.321 ± 3.007
6.658AlaVal: 6.658 ± 1.279
0.0AlaTrp: 0.0 ± 0.0
3.995AlaTyr: 3.995 ± 1.711
0.0AlaXaa: 0.0 ± 0.0
Cys
1.332CysAla: 1.332 ± 0.873
0.0CysCys: 0.0 ± 0.0
1.332CysAsp: 1.332 ± 0.873
0.0CysGlu: 0.0 ± 0.0
0.0CysPhe: 0.0 ± 0.0
1.332CysGly: 1.332 ± 1.141
0.0CysHis: 0.0 ± 0.0
1.332CysIle: 1.332 ± 0.873
1.332CysLys: 1.332 ± 1.141
1.332CysLeu: 1.332 ± 1.141
0.0CysMet: 0.0 ± 0.0
0.0CysAsn: 0.0 ± 0.0
1.332CysPro: 1.332 ± 1.141
0.0CysGln: 0.0 ± 0.0
0.0CysArg: 0.0 ± 0.0
0.0CysSer: 0.0 ± 0.0
1.332CysThr: 1.332 ± 0.873
0.0CysVal: 0.0 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
0.0AspAla: 0.0 ± 0.0
0.0AspCys: 0.0 ± 0.0
5.326AspAsp: 5.326 ± 1.473
2.663AspGlu: 2.663 ± 0.736
0.0AspPhe: 0.0 ± 0.0
1.332AspGly: 1.332 ± 1.141
0.0AspHis: 0.0 ± 0.0
2.663AspIle: 2.663 ± 1.746
3.995AspLys: 3.995 ± 1.711
2.663AspLeu: 2.663 ± 0.736
5.326AspMet: 5.326 ± 1.896
5.326AspAsn: 5.326 ± 0.909
2.663AspPro: 2.663 ± 1.746
1.332AspGln: 1.332 ± 1.851
3.995AspArg: 3.995 ± 3.424
3.995AspSer: 3.995 ± 2.619
5.326AspThr: 5.326 ± 1.896
6.658AspVal: 6.658 ± 2.652
1.332AspTrp: 1.332 ± 1.851
2.663AspTyr: 2.663 ± 1.946
0.0AspXaa: 0.0 ± 0.0
Glu
5.326GluAla: 5.326 ± 1.473
0.0GluCys: 0.0 ± 0.0
3.995GluAsp: 3.995 ± 1.875
3.995GluGlu: 3.995 ± 1.143
2.663GluPhe: 2.663 ± 1.746
5.326GluGly: 5.326 ± 1.473
1.332GluHis: 1.332 ± 1.141
2.663GluIle: 2.663 ± 2.283
6.658GluLys: 6.658 ± 2.374
1.332GluLeu: 1.332 ± 1.141
2.663GluMet: 2.663 ± 1.373
1.332GluAsn: 1.332 ± 0.873
2.663GluPro: 2.663 ± 0.736
2.663GluGln: 2.663 ± 2.283
2.663GluArg: 2.663 ± 0.736
1.332GluSer: 1.332 ± 0.873
2.663GluThr: 2.663 ± 2.283
0.0GluVal: 0.0 ± 0.0
2.663GluTrp: 2.663 ± 2.283
1.332GluTyr: 1.332 ± 1.141
0.0GluXaa: 0.0 ± 0.0
Phe
1.332PheAla: 1.332 ± 0.873
1.332PheCys: 1.332 ± 1.141
1.332PheAsp: 1.332 ± 1.141
1.332PheGlu: 1.332 ± 1.141
0.0PhePhe: 0.0 ± 0.0
2.663PheGly: 2.663 ± 1.746
0.0PheHis: 0.0 ± 0.0
1.332PheIle: 1.332 ± 1.141
2.663PheLys: 2.663 ± 2.283
2.663PheLeu: 2.663 ± 0.736
1.332PheMet: 1.332 ± 1.141
0.0PheAsn: 0.0 ± 0.0
2.663PhePro: 2.663 ± 1.746
1.332PheGln: 1.332 ± 0.873
1.332PheArg: 1.332 ± 0.873
3.995PheSer: 3.995 ± 1.143
3.995PheThr: 3.995 ± 1.143
1.332PheVal: 1.332 ± 1.851
0.0PheTrp: 0.0 ± 0.0
1.332PheTyr: 1.332 ± 0.873
0.0PheXaa: 0.0 ± 0.0
Gly
3.995GlyAla: 3.995 ± 1.875
0.0GlyCys: 0.0 ± 0.0
2.663GlyAsp: 2.663 ± 1.646
3.995GlyGlu: 3.995 ± 1.143
0.0GlyPhe: 0.0 ± 0.0
3.995GlyGly: 3.995 ± 1.242
1.332GlyHis: 1.332 ± 1.141
6.658GlyIle: 6.658 ± 1.279
6.658GlyLys: 6.658 ± 2.374
10.652GlyLeu: 10.652 ± 1.782
0.0GlyMet: 0.0 ± 0.0
9.321GlyAsn: 9.321 ± 0.917
1.332GlyPro: 1.332 ± 1.141
3.995GlyGln: 3.995 ± 1.242
2.663GlyArg: 2.663 ± 3.702
5.326GlySer: 5.326 ± 3.291
5.326GlyThr: 5.326 ± 1.896
5.326GlyVal: 5.326 ± 3.066
3.995GlyTrp: 3.995 ± 1.242
2.663GlyTyr: 2.663 ± 2.283
0.0GlyXaa: 0.0 ± 0.0
His
2.663HisAla: 2.663 ± 1.946
0.0HisCys: 0.0 ± 0.0
0.0HisAsp: 0.0 ± 0.0
0.0HisGlu: 0.0 ± 0.0
0.0HisPhe: 0.0 ± 0.0
0.0HisGly: 0.0 ± 0.0
1.332HisHis: 1.332 ± 1.141
1.332HisIle: 1.332 ± 1.141
1.332HisLys: 1.332 ± 0.873
3.995HisLeu: 3.995 ± 1.711
0.0HisMet: 0.0 ± 0.0
0.0HisAsn: 0.0 ± 0.0
0.0HisPro: 0.0 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.0HisArg: 0.0 ± 0.0
0.0HisSer: 0.0 ± 0.0
1.332HisThr: 1.332 ± 0.873
0.0HisVal: 0.0 ± 0.0
0.0HisTrp: 0.0 ± 0.0
1.332HisTyr: 1.332 ± 1.141
0.0HisXaa: 0.0 ± 0.0
Ile
5.326IleAla: 5.326 ± 0.909
0.0IleCys: 0.0 ± 0.0
1.332IleAsp: 1.332 ± 1.141
7.989IleGlu: 7.989 ± 2.209
0.0IlePhe: 0.0 ± 0.0
6.658IleGly: 6.658 ± 1.713
2.663IleHis: 2.663 ± 0.736
1.332IleIle: 1.332 ± 0.873
5.326IleLys: 5.326 ± 2.814
3.995IleLeu: 3.995 ± 1.143
0.0IleMet: 0.0 ± 0.0
3.995IleAsn: 3.995 ± 2.619
2.663IlePro: 2.663 ± 1.746
0.0IleGln: 0.0 ± 0.0
1.332IleArg: 1.332 ± 1.851
2.663IleSer: 2.663 ± 2.283
0.0IleThr: 0.0 ± 0.0
2.663IleVal: 2.663 ± 1.646
1.332IleTrp: 1.332 ± 1.141
1.332IleTyr: 1.332 ± 0.873
0.0IleXaa: 0.0 ± 0.0
Lys
6.658LysAla: 6.658 ± 0.863
0.0LysCys: 0.0 ± 0.0
1.332LysAsp: 1.332 ± 1.141
2.663LysGlu: 2.663 ± 2.283
2.663LysPhe: 2.663 ± 1.746
2.663LysGly: 2.663 ± 1.946
1.332LysHis: 1.332 ± 1.141
3.995LysIle: 3.995 ± 1.143
1.332LysLys: 1.332 ± 0.873
3.995LysLeu: 3.995 ± 1.143
2.663LysMet: 2.663 ± 0.949
3.995LysAsn: 3.995 ± 2.598
2.663LysPro: 2.663 ± 0.736
2.663LysGln: 2.663 ± 2.283
2.663LysArg: 2.663 ± 2.283
3.995LysSer: 3.995 ± 1.711
0.0LysThr: 0.0 ± 0.0
3.995LysVal: 3.995 ± 1.143
1.332LysTrp: 1.332 ± 1.141
2.663LysTyr: 2.663 ± 1.946
0.0LysXaa: 0.0 ± 0.0
Leu
2.663LeuAla: 2.663 ± 0.736
0.0LeuCys: 0.0 ± 0.0
6.658LeuAsp: 6.658 ± 1.713
3.995LeuGlu: 3.995 ± 3.424
2.663LeuPhe: 2.663 ± 0.736
5.326LeuGly: 5.326 ± 2.417
0.0LeuHis: 0.0 ± 0.0
3.995LeuIle: 3.995 ± 1.242
3.995LeuLys: 3.995 ± 1.711
6.658LeuLeu: 6.658 ± 0.863
2.663LeuMet: 2.663 ± 1.746
1.332LeuAsn: 1.332 ± 0.873
2.663LeuPro: 2.663 ± 0.736
1.332LeuGln: 1.332 ± 0.873
3.995LeuArg: 3.995 ± 1.143
3.995LeuSer: 3.995 ± 1.711
6.658LeuThr: 6.658 ± 2.722
6.658LeuVal: 6.658 ± 1.713
0.0LeuTrp: 0.0 ± 0.0
6.658LeuTyr: 6.658 ± 3.146
0.0LeuXaa: 0.0 ± 0.0
Met
1.332MetAla: 1.332 ± 0.873
1.332MetCys: 1.332 ± 0.873
2.663MetAsp: 2.663 ± 1.646
3.995MetGlu: 3.995 ± 1.711
1.332MetPhe: 1.332 ± 0.873
3.995MetGly: 3.995 ± 1.711
0.0MetHis: 0.0 ± 0.0
1.332MetIle: 1.332 ± 0.873
0.0MetLys: 0.0 ± 0.0
2.663MetLeu: 2.663 ± 0.736
1.332MetMet: 1.332 ± 0.873
1.332MetAsn: 1.332 ± 0.873
1.332MetPro: 1.332 ± 0.873
0.0MetGln: 0.0 ± 0.0
0.0MetArg: 0.0 ± 0.0
2.663MetSer: 2.663 ± 3.702
1.332MetThr: 1.332 ± 1.141
5.326MetVal: 5.326 ± 2.417
2.663MetTrp: 2.663 ± 2.283
1.332MetTyr: 1.332 ± 0.873
0.0MetXaa: 0.0 ± 0.0
Asn
3.995AsnAla: 3.995 ± 2.619
0.0AsnCys: 0.0 ± 0.0
3.995AsnAsp: 3.995 ± 3.424
2.663AsnGlu: 2.663 ± 1.746
3.995AsnPhe: 3.995 ± 1.711
6.658AsnGly: 6.658 ± 2.374
1.332AsnHis: 1.332 ± 0.873
0.0AsnIle: 0.0 ± 0.0
1.332AsnLys: 1.332 ± 0.873
3.995AsnLeu: 3.995 ± 3.392
2.663AsnMet: 2.663 ± 1.646
2.663AsnAsn: 2.663 ± 1.746
6.658AsnPro: 6.658 ± 1.713
3.995AsnGln: 3.995 ± 3.392
1.332AsnArg: 1.332 ± 1.851
5.326AsnSer: 5.326 ± 2.417
1.332AsnThr: 1.332 ± 1.851
1.332AsnVal: 1.332 ± 1.851
0.0AsnTrp: 0.0 ± 0.0
2.663AsnTyr: 2.663 ± 1.646
0.0AsnXaa: 0.0 ± 0.0
Pro
2.663ProAla: 2.663 ± 1.746
1.332ProCys: 1.332 ± 1.141
0.0ProAsp: 0.0 ± 0.0
1.332ProGlu: 1.332 ± 0.873
1.332ProPhe: 1.332 ± 1.851
3.995ProGly: 3.995 ± 1.875
0.0ProHis: 0.0 ± 0.0
1.332ProIle: 1.332 ± 0.873
1.332ProLys: 1.332 ± 1.141
6.658ProLeu: 6.658 ± 2.722
2.663ProMet: 2.663 ± 0.736
2.663ProAsn: 2.663 ± 0.736
3.995ProPro: 3.995 ± 1.711
2.663ProGln: 2.663 ± 1.746
6.658ProArg: 6.658 ± 0.863
2.663ProSer: 2.663 ± 3.702
7.989ProThr: 7.989 ± 2.209
1.332ProVal: 1.332 ± 1.141
1.332ProTrp: 1.332 ± 1.141
2.663ProTyr: 2.663 ± 1.646
0.0ProXaa: 0.0 ± 0.0
Gln
1.332GlnAla: 1.332 ± 0.873
0.0GlnCys: 0.0 ± 0.0
5.326GlnAsp: 5.326 ± 0.909
0.0GlnGlu: 0.0 ± 0.0
2.663GlnPhe: 2.663 ± 0.736
1.332GlnGly: 1.332 ± 1.141
1.332GlnHis: 1.332 ± 1.141
6.658GlnIle: 6.658 ± 1.713
0.0GlnLys: 0.0 ± 0.0
3.995GlnLeu: 3.995 ± 1.711
0.0GlnMet: 0.0 ± 0.0
3.995GlnAsn: 3.995 ± 3.392
1.332GlnPro: 1.332 ± 0.873
0.0GlnGln: 0.0 ± 0.0
0.0GlnArg: 0.0 ± 0.0
2.663GlnSer: 2.663 ± 1.746
0.0GlnThr: 0.0 ± 0.0
0.0GlnVal: 0.0 ± 0.0
2.663GlnTrp: 2.663 ± 3.702
1.332GlnTyr: 1.332 ± 0.873
0.0GlnXaa: 0.0 ± 0.0
Arg
3.995ArgAla: 3.995 ± 1.242
0.0ArgCys: 0.0 ± 0.0
1.332ArgAsp: 1.332 ± 1.141
0.0ArgGlu: 0.0 ± 0.0
2.663ArgPhe: 2.663 ± 0.736
3.995ArgGly: 3.995 ± 1.242
0.0ArgHis: 0.0 ± 0.0
2.663ArgIle: 2.663 ± 0.736
1.332ArgLys: 1.332 ± 1.141
2.663ArgLeu: 2.663 ± 1.746
1.332ArgMet: 1.332 ± 1.376
1.332ArgAsn: 1.332 ± 1.851
2.663ArgPro: 2.663 ± 1.946
3.995ArgGln: 3.995 ± 1.242
3.995ArgArg: 3.995 ± 1.711
3.995ArgSer: 3.995 ± 3.622
2.663ArgThr: 2.663 ± 0.736
2.663ArgVal: 2.663 ± 1.746
2.663ArgTrp: 2.663 ± 0.736
3.995ArgTyr: 3.995 ± 1.242
0.0ArgXaa: 0.0 ± 0.0
Ser
3.995SerAla: 3.995 ± 1.711
1.332SerCys: 1.332 ± 0.873
6.658SerAsp: 6.658 ± 2.722
2.663SerGlu: 2.663 ± 1.746
0.0SerPhe: 0.0 ± 0.0
9.321SerGly: 9.321 ± 4.296
0.0SerHis: 0.0 ± 0.0
2.663SerIle: 2.663 ± 0.736
2.663SerLys: 2.663 ± 1.646
2.663SerLeu: 2.663 ± 0.736
3.995SerMet: 3.995 ± 1.875
1.332SerAsn: 1.332 ± 0.873
3.995SerPro: 3.995 ± 2.598
0.0SerGln: 0.0 ± 0.0
5.326SerArg: 5.326 ± 1.473
2.663SerSer: 2.663 ± 1.746
6.658SerThr: 6.658 ± 3.114
5.326SerVal: 5.326 ± 2.417
3.995SerTrp: 3.995 ± 3.392
6.658SerTyr: 6.658 ± 2.683
0.0SerXaa: 0.0 ± 0.0
Thr
5.326ThrAla: 5.326 ± 3.492
0.0ThrCys: 0.0 ± 0.0
3.995ThrAsp: 3.995 ± 2.619
6.658ThrGlu: 6.658 ± 1.713
1.332ThrPhe: 1.332 ± 1.141
5.326ThrGly: 5.326 ± 1.896
0.0ThrHis: 0.0 ± 0.0
3.995ThrIle: 3.995 ± 1.143
1.332ThrLys: 1.332 ± 1.851
3.995ThrLeu: 3.995 ± 1.143
2.663ThrMet: 2.663 ± 0.736
6.658ThrAsn: 6.658 ± 3.146
3.995ThrPro: 3.995 ± 2.619
2.663ThrGln: 2.663 ± 1.746
0.0ThrArg: 0.0 ± 0.0
9.321ThrSer: 9.321 ± 2.377
6.658ThrThr: 6.658 ± 4.365
3.995ThrVal: 3.995 ± 2.619
3.995ThrTrp: 3.995 ± 1.711
1.332ThrTyr: 1.332 ± 0.873
0.0ThrXaa: 0.0 ± 0.0
Val
2.663ValAla: 2.663 ± 1.646
1.332ValCys: 1.332 ± 1.141
2.663ValAsp: 2.663 ± 2.283
1.332ValGlu: 1.332 ± 1.141
3.995ValPhe: 3.995 ± 1.711
5.326ValGly: 5.326 ± 3.291
1.332ValHis: 1.332 ± 0.873
2.663ValIle: 2.663 ± 2.283
3.995ValLys: 3.995 ± 1.875
2.663ValLeu: 2.663 ± 0.736
1.332ValMet: 1.332 ± 0.873
2.663ValAsn: 2.663 ± 1.746
5.326ValPro: 5.326 ± 5.414
1.332ValGln: 1.332 ± 0.873
0.0ValArg: 0.0 ± 0.0
9.321ValSer: 9.321 ± 4.689
5.326ValThr: 5.326 ± 3.492
5.326ValVal: 5.326 ± 2.814
1.332ValTrp: 1.332 ± 0.873
2.663ValTyr: 2.663 ± 1.646
0.0ValXaa: 0.0 ± 0.0
Trp
1.332TrpAla: 1.332 ± 0.873
0.0TrpCys: 0.0 ± 0.0
1.332TrpAsp: 1.332 ± 1.141
2.663TrpGlu: 2.663 ± 1.946
2.663TrpPhe: 2.663 ± 2.283
1.332TrpGly: 1.332 ± 1.851
0.0TrpHis: 0.0 ± 0.0
2.663TrpIle: 2.663 ± 1.946
3.995TrpLys: 3.995 ± 1.711
0.0TrpLeu: 0.0 ± 0.0
1.332TrpMet: 1.332 ± 1.141
1.332TrpAsn: 1.332 ± 0.873
1.332TrpPro: 1.332 ± 1.141
1.332TrpGln: 1.332 ± 1.141
2.663TrpArg: 2.663 ± 3.702
1.332TrpSer: 1.332 ± 1.851
3.995TrpThr: 3.995 ± 1.242
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
1.332TrpTyr: 1.332 ± 0.873
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.663TyrAla: 2.663 ± 1.646
1.332TyrCys: 1.332 ± 1.141
1.332TyrAsp: 1.332 ± 0.873
3.995TyrGlu: 3.995 ± 3.424
1.332TyrPhe: 1.332 ± 0.873
1.332TyrGly: 1.332 ± 1.851
0.0TyrHis: 0.0 ± 0.0
1.332TyrIle: 1.332 ± 0.873
2.663TyrLys: 2.663 ± 1.946
2.663TyrLeu: 2.663 ± 1.946
1.332TyrMet: 1.332 ± 1.851
6.658TyrAsn: 6.658 ± 3.146
3.995TyrPro: 3.995 ± 1.875
2.663TyrGln: 2.663 ± 0.736
5.326TyrArg: 5.326 ± 0.909
2.663TyrSer: 2.663 ± 0.736
1.332TyrThr: 1.332 ± 0.873
3.995TyrVal: 3.995 ± 1.143
1.332TyrTrp: 1.332 ± 1.851
2.663TyrTyr: 2.663 ± 1.746
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 3 proteins (752 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski