Legionella oakridgensis ATCC 33761 = DSM 21215

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella; Legionella oakridgensis

Average proteome isoelectric point is 6.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2907 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W0BHA3|W0BHA3_9GAMM Coenzyme F420-reducing hydrogenase alpha subunit OS=Legionella oakridgensis ATCC 33761 = DSM 21215 OX=1268635 GN=Loa_02480 PE=3 SV=1
MM1 pKa = 7.49SNSDD5 pKa = 3.62FEE7 pKa = 4.55QFLTALGAFEE17 pKa = 5.21SGIDD21 pKa = 3.5TTQTQTTSWMQYY33 pKa = 10.18LQVFDD38 pKa = 4.77PNRR41 pKa = 11.84GNVDD45 pKa = 3.65PNSVNLSDD53 pKa = 4.62PNDD56 pKa = 3.79LAEE59 pKa = 4.5LQYY62 pKa = 10.72HH63 pKa = 5.06VHH65 pKa = 5.66NTLGFLGKK73 pKa = 10.09YY74 pKa = 8.49QFGEE78 pKa = 4.07PLLIDD83 pKa = 4.07LGYY86 pKa = 10.69YY87 pKa = 10.18SPAPTGYY94 pKa = 10.76YY95 pKa = 8.46GTTATNEE102 pKa = 4.0WQGTWTGKK110 pKa = 10.41NGVDD114 pKa = 3.44SKK116 pKa = 11.6EE117 pKa = 3.82EE118 pKa = 3.77FMTNVQEE125 pKa = 4.04LAIRR129 pKa = 11.84EE130 pKa = 4.21AFAMNMGVINQYY142 pKa = 10.96LNQAGKK148 pKa = 8.9TIDD151 pKa = 4.36DD152 pKa = 4.01FLGHH156 pKa = 6.76EE157 pKa = 4.32FTYY160 pKa = 10.69TRR162 pKa = 11.84FGEE165 pKa = 3.99AHH167 pKa = 6.79IATVTMSGILASAHH181 pKa = 5.41LQGPGGVAQLLLHH194 pKa = 6.72NIASSDD200 pKa = 3.6EE201 pKa = 4.18YY202 pKa = 10.41GTNILFYY209 pKa = 8.68MDD211 pKa = 4.15KK212 pKa = 10.59FGGYY216 pKa = 7.47HH217 pKa = 5.8TPFGTNGDD225 pKa = 4.06DD226 pKa = 3.82FLVGSDD232 pKa = 3.73YY233 pKa = 11.6SEE235 pKa = 4.01TFMGEE240 pKa = 4.0GGHH243 pKa = 6.31NEE245 pKa = 4.09YY246 pKa = 9.04EE247 pKa = 4.3TGGGNDD253 pKa = 4.6KK254 pKa = 10.79IIIAQNITGNDD265 pKa = 3.52VIQDD269 pKa = 3.11FDD271 pKa = 3.33IARR274 pKa = 11.84DD275 pKa = 3.92VISLTKK281 pKa = 10.54FPGLTFADD289 pKa = 4.48LSITALNNNAVIHH302 pKa = 6.16FPNGQTVTLNNVDD315 pKa = 3.62ASQISANQFVSGPYY329 pKa = 9.97KK330 pKa = 10.64IMWNAGSGDD339 pKa = 3.8TIIEE343 pKa = 4.21NFNLQHH349 pKa = 7.28DD350 pKa = 5.44LIDD353 pKa = 4.08LNYY356 pKa = 10.93AFASNNLALYY366 pKa = 9.05EE367 pKa = 4.31EE368 pKa = 4.87NGSAVIDD375 pKa = 4.03VIGNNQRR382 pKa = 11.84IILAGIEE389 pKa = 4.2LDD391 pKa = 3.71EE392 pKa = 4.89LSPFHH397 pKa = 7.16FIKK400 pKa = 10.8APTDD404 pKa = 3.7FAQVHH409 pKa = 5.96FGINSDD415 pKa = 3.45HH416 pKa = 6.7TPPVVDD422 pKa = 4.76PGDD425 pKa = 3.98ANTGNDD431 pKa = 3.26NPADD435 pKa = 3.9GGDD438 pKa = 3.6NNNQQGTMDD447 pKa = 4.32GDD449 pKa = 3.68VFAYY453 pKa = 7.38TWNWGARR460 pKa = 11.84DD461 pKa = 3.9VIQGFDD467 pKa = 3.28ATEE470 pKa = 4.07DD471 pKa = 4.06KK472 pKa = 10.8IDD474 pKa = 4.21LQNFWTSFDD483 pKa = 4.26RR484 pKa = 11.84IQFYY488 pKa = 11.47DD489 pKa = 3.59NANGDD494 pKa = 3.88AVIDD498 pKa = 3.82LTTLNNQTITLADD511 pKa = 3.42VSVQQLSSANFIGVTGTMGIHH532 pKa = 6.24NEE534 pKa = 4.16PNNPPANEE542 pKa = 4.11PTDD545 pKa = 3.83PSPPSEE551 pKa = 4.16NDD553 pKa = 3.53AIPPEE558 pKa = 4.48DD559 pKa = 3.59TTGSGDD565 pKa = 3.53SYY567 pKa = 11.21VFTWKK572 pKa = 9.52WGAAEE577 pKa = 4.37TINNFDD583 pKa = 3.31VGQDD587 pKa = 3.74VIDD590 pKa = 5.08LKK592 pKa = 11.12SFWSSYY598 pKa = 7.87SQFSIYY604 pKa = 10.73DD605 pKa = 3.63NPQGNAVIDD614 pKa = 4.13LSQLNNQTITIQGVSSAEE632 pKa = 3.73LSAKK636 pKa = 10.47NIVGVAGTIDD646 pKa = 3.31QALTGHH652 pKa = 6.99SIPPSDD658 pKa = 3.96HH659 pKa = 6.96TDD661 pKa = 3.52PPDD664 pKa = 3.38TGTVTDD670 pKa = 4.91VISHH674 pKa = 6.87PVNSTNLVASDD685 pKa = 3.76AVQDD689 pKa = 3.72VFNFTWSWGSQNVIDD704 pKa = 5.15GFNPTQDD711 pKa = 3.38TVDD714 pKa = 4.27LSRR717 pKa = 11.84FWTTNDD723 pKa = 3.72QVDD726 pKa = 4.25IYY728 pKa = 11.79NNAQGDD734 pKa = 4.09AVIDD738 pKa = 3.99LSALNNQTITLLGVNADD755 pKa = 5.46DD756 pKa = 5.2LNQDD760 pKa = 3.08NVIFF764 pKa = 4.45

Molecular weight: 83.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W0BDB8|W0BDB8_9GAMM Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase OS=Legionella oakridgensis ATCC 33761 = DSM 21215 OX=1268635 GN=Loa_01076 PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNLKK11 pKa = 10.18RR12 pKa = 11.84KK13 pKa = 9.04RR14 pKa = 11.84DD15 pKa = 3.36HH16 pKa = 6.66GFRR19 pKa = 11.84ARR21 pKa = 11.84MATRR25 pKa = 11.84AGRR28 pKa = 11.84LVLKK32 pKa = 10.36RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.84GRR39 pKa = 11.84KK40 pKa = 8.85RR41 pKa = 11.84LSAA44 pKa = 3.96

Molecular weight: 5.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2907

0

2907

808281

29

3405

278.0

31.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.324 ± 0.048

1.236 ± 0.016

4.694 ± 0.033

5.863 ± 0.048

4.374 ± 0.033

6.178 ± 0.048

2.846 ± 0.022

7.237 ± 0.043

5.634 ± 0.04

11.051 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.621 ± 0.023

4.263 ± 0.037

4.15 ± 0.026

4.787 ± 0.033

4.727 ± 0.036

6.15 ± 0.038

5.21 ± 0.033

6.058 ± 0.042

1.176 ± 0.016

3.421 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski