Burkholderia plantarii

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia

Average proteome isoelectric point is 6.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6432 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0B6RZU9|A0A0B6RZU9_BURPL Chaperone SurA OS=Burkholderia plantarii OX=41899 GN=surA PE=3 SV=1
MM1 pKa = 7.78SYY3 pKa = 7.45TTPSSLSDD11 pKa = 3.07FMGRR15 pKa = 11.84FEE17 pKa = 5.28NGGLLSGNTSGGTTTFYY34 pKa = 11.33YY35 pKa = 10.53EE36 pKa = 4.4PSTNTINFGYY46 pKa = 10.4GINLSFASGSTQARR60 pKa = 11.84GVIDD64 pKa = 3.81SALSAANISLSDD76 pKa = 3.96ALWSKK81 pKa = 10.51IKK83 pKa = 10.66NATAATRR90 pKa = 11.84GALVSDD96 pKa = 4.58LNNLVTNDD104 pKa = 3.47GSSPDD109 pKa = 3.56WQAVAASVTSAYY121 pKa = 7.59TQQIVVPEE129 pKa = 4.32LQSHH133 pKa = 6.36IPNLASLPATTQWALEE149 pKa = 4.02DD150 pKa = 3.61AFYY153 pKa = 11.19NSPSLLGPLVYY164 pKa = 10.31GAANSGNLASIAVQLAFNEE183 pKa = 4.33EE184 pKa = 4.29TPNAAQSGAEE194 pKa = 3.98LRR196 pKa = 11.84NLARR200 pKa = 11.84AALALGGSITFAPGGNTISSIDD222 pKa = 3.4WSKK225 pKa = 11.94ADD227 pKa = 3.55IASVGQFLSQIVSSAPVGKK246 pKa = 10.57GGSTADD252 pKa = 3.19AYY254 pKa = 9.67VNKK257 pKa = 9.2WGSSASASYY266 pKa = 8.76LTLTDD271 pKa = 3.2SLYY274 pKa = 11.04SYY276 pKa = 11.24VEE278 pKa = 3.8SQGRR282 pKa = 11.84YY283 pKa = 7.99VVDD286 pKa = 3.61TGQATYY292 pKa = 11.21ASIVSQNSDD301 pKa = 3.55DD302 pKa = 4.26PNFGNLTAADD312 pKa = 3.49IAALNGMSVSATLTAGQVIDD332 pKa = 4.03IPTSVTEE339 pKa = 4.27GLPASLSSSLSYY351 pKa = 10.53TLDD354 pKa = 3.2VTTGRR359 pKa = 11.84VVASPITDD367 pKa = 3.07GMFGGSVTVQNSATGAFLGYY387 pKa = 9.78FDD389 pKa = 5.51AGTVTGEE396 pKa = 3.54AAAASGQWTLSLNGGRR412 pKa = 11.84SVTFNADD419 pKa = 2.9SSISVSDD426 pKa = 3.8PAGSGSNFAPGASINVSSTGSATVLSSPGGTFSPVFVPTGNAYY469 pKa = 8.22GTDD472 pKa = 3.38LSTINSGQDD481 pKa = 2.7VGLATDD487 pKa = 3.96ISALMGIAAPIAIDD501 pKa = 4.87AVALDD506 pKa = 4.02YY507 pKa = 11.41LSDD510 pKa = 4.99RR511 pKa = 11.84IQYY514 pKa = 11.17SNVSDD519 pKa = 3.1KK520 pKa = 10.48WVAAFIGPAPEE531 pKa = 4.44GTFSLSSTLLSSTFDD546 pKa = 3.37PTTAALIEE554 pKa = 4.39LKK556 pKa = 9.46NTIANRR562 pKa = 11.84PKK564 pKa = 8.84PTWVSISIDD573 pKa = 3.29VTGFNSVPKK582 pKa = 9.23TSASVGILQQTDD594 pKa = 3.34AQVSPGTSLVQATMAGSQEE613 pKa = 3.83AAQVLNAYY621 pKa = 8.97INKK624 pKa = 9.68GYY626 pKa = 10.42AAAGAQTATSIATTLSGEE644 pKa = 4.3PTDD647 pKa = 4.12FTSPIAKK654 pKa = 8.76IQSWYY659 pKa = 8.3GTTRR663 pKa = 11.84IQGAGNGSTIGPTAGVPDD681 pKa = 5.24EE682 pKa = 3.98ISAYY686 pKa = 10.45GSTAVAGAVPSSNGGYY702 pKa = 9.76LIHH705 pKa = 6.4STAPADD711 pKa = 3.83TVRR714 pKa = 11.84ALQDD718 pKa = 3.44IQSLTPTAVAVARR731 pKa = 11.84SVAGGATAFGAAEE744 pKa = 4.42FAAVQADD751 pKa = 3.72SDD753 pKa = 3.94GSAASEE759 pKa = 3.67ATARR763 pKa = 11.84NLAVFANQAWGSALTEE779 pKa = 3.97YY780 pKa = 10.82LQVAEE785 pKa = 4.8NVSAMSQEE793 pKa = 3.96LSNVSAEE800 pKa = 4.17LTALEE805 pKa = 4.16PVSYY809 pKa = 10.13EE810 pKa = 3.74VTGNLVNGYY819 pKa = 9.67SYY821 pKa = 11.31YY822 pKa = 10.91SSGDD826 pKa = 3.19AAFAADD832 pKa = 4.27TFNGFADD839 pKa = 3.84GMKK842 pKa = 9.81TFAATKK848 pKa = 10.26DD849 pKa = 3.71GLDD852 pKa = 3.41RR853 pKa = 11.84ALLAIAQADD862 pKa = 3.59NASRR866 pKa = 11.84IFVGEE871 pKa = 4.15NGSSTTLEE879 pKa = 3.94SDD881 pKa = 2.8TDD883 pKa = 3.55IFVAGGGNEE892 pKa = 4.07TVADD896 pKa = 3.99GTGQDD901 pKa = 4.08SILVSSGSGNLYY913 pKa = 10.0ISNFKK918 pKa = 10.86AGINGDD924 pKa = 3.47QLQFLGVGDD933 pKa = 4.11NVVASDD939 pKa = 4.41DD940 pKa = 4.3GNGGTLLKK948 pKa = 10.6YY949 pKa = 10.81GSGNFIDD956 pKa = 5.64LIGVSAGSLNLYY968 pKa = 10.06QNITGVSAISFVGVSSPASFGLGGNRR994 pKa = 11.84IYY996 pKa = 10.87DD997 pKa = 3.9GQVHH1001 pKa = 6.55ISSITGTNSGSTLSGDD1017 pKa = 3.75SAATTLTGGAGNDD1030 pKa = 3.49TFKK1033 pKa = 11.41VEE1035 pKa = 4.02GNGYY1039 pKa = 9.35VINGAGGTNTVSYY1052 pKa = 10.82GDD1054 pKa = 3.56VPFGVSVNLQTGTDD1068 pKa = 3.58NLGTTLFAIQNVEE1081 pKa = 3.69GSSYY1085 pKa = 11.44DD1086 pKa = 3.45DD1087 pKa = 4.39TIAGDD1092 pKa = 3.73TNNNVLDD1099 pKa = 4.32GKK1101 pKa = 10.71GGNDD1105 pKa = 3.44TLIGGGGNDD1114 pKa = 3.52TYY1116 pKa = 11.68VFDD1119 pKa = 4.73AGYY1122 pKa = 11.0GSVTIEE1128 pKa = 4.75NGLAPNGIPSSEE1140 pKa = 4.14LLFGAGIDD1148 pKa = 5.37ANDD1151 pKa = 3.1LWFTRR1156 pKa = 11.84SGNDD1160 pKa = 2.98LTIQVLGTDD1169 pKa = 3.28NQVTVKK1175 pKa = 10.25GWFSNAWQQLASISLSDD1192 pKa = 3.88GLQVSPQTVATILKK1206 pKa = 9.51LQALYY1211 pKa = 10.72VAANPGFDD1219 pKa = 4.49PDD1221 pKa = 3.94TAQAMPGGIDD1231 pKa = 3.23LTSYY1235 pKa = 10.21FGPVSNPTTVPTATNVALATEE1256 pKa = 4.28HH1257 pKa = 7.03LYY1259 pKa = 10.61TSGVATQGANLAGSAATQINNPVGSAWSANVYY1291 pKa = 10.75ANNLAYY1297 pKa = 10.08GSKK1300 pKa = 10.48ALPAPYY1306 pKa = 10.37GSGEE1310 pKa = 4.04NYY1312 pKa = 10.02AYY1314 pKa = 10.22QYY1316 pKa = 10.94YY1317 pKa = 8.24VTGSSQPYY1325 pKa = 7.73VALSVRR1331 pKa = 11.84PWGQYY1336 pKa = 10.96APGTSISTTPPGVTSYY1352 pKa = 10.07QQIYY1356 pKa = 10.45ALTPSTFYY1364 pKa = 11.41VKK1366 pKa = 10.04ATTSVSPSSSSNPDD1380 pKa = 2.84SSLVFASDD1388 pKa = 3.59PNVMVNAINAVTEE1401 pKa = 4.17AVDD1404 pKa = 4.03LATTGATLAQAISTADD1420 pKa = 3.55TARR1423 pKa = 11.84QTALGSAVAANSAGAAFGSQPAVQARR1449 pKa = 11.84ADD1451 pKa = 3.58ATTAEE1456 pKa = 4.44ADD1458 pKa = 3.58LAAALAQWAPVQSNLVTAGGVLASSQAALNGILPGTQVSTQQRR1501 pKa = 11.84TGYY1504 pKa = 9.63GLSGPSTVTVTYY1516 pKa = 6.11TTNYY1520 pKa = 10.25SFYY1523 pKa = 10.18TSTDD1527 pKa = 3.1QAEE1530 pKa = 4.29FNALQSAVSNAQGAVGEE1547 pKa = 4.62ADD1549 pKa = 3.83FLMLSTLQSALQDD1562 pKa = 3.63FGAYY1566 pKa = 9.49EE1567 pKa = 4.09RR1568 pKa = 11.84VQVGGTSSNLGADD1581 pKa = 3.73DD1582 pKa = 5.68GGDD1585 pKa = 3.71LLIAAGGGYY1594 pKa = 8.09HH1595 pKa = 5.48TVVGGAGRR1603 pKa = 11.84DD1604 pKa = 3.46TFVFGGWNDD1613 pKa = 3.44TSSATVQNFATGTQGDD1629 pKa = 4.32RR1630 pKa = 11.84LLLIPAQNRR1639 pKa = 11.84TVYY1642 pKa = 9.44LTDD1645 pKa = 3.78GGGTTDD1651 pKa = 4.29ASFFVDD1657 pKa = 3.2NGGVDD1662 pKa = 3.91TVALAGVSLGALSLYY1677 pKa = 11.14DD1678 pKa = 3.63NFNGVDD1684 pKa = 3.23TASFANEE1691 pKa = 3.82SHH1693 pKa = 6.19GVSIDD1698 pKa = 3.47LATVTPRR1705 pKa = 11.84SYY1707 pKa = 11.23DD1708 pKa = 3.03GSTHH1712 pKa = 5.3IRR1714 pKa = 11.84NLVGSNYY1721 pKa = 10.32GDD1723 pKa = 3.62TLTGDD1728 pKa = 3.58EE1729 pKa = 4.42QDD1731 pKa = 3.56NVITGGAGNDD1741 pKa = 3.73VLSGGAGNNTLDD1753 pKa = 4.25GGGGNNTVSYY1763 pKa = 9.86AGSPGGVTVDD1773 pKa = 3.86LTAGTASNGYY1783 pKa = 10.0GGTDD1787 pKa = 3.32TLSHH1791 pKa = 5.92IQNVIGSGGNDD1802 pKa = 3.19TMFGDD1807 pKa = 4.28ANNNVLDD1814 pKa = 4.34GNGGNDD1820 pKa = 3.32VLVGGGGSDD1829 pKa = 3.31TYY1831 pKa = 11.63VFDD1834 pKa = 4.48AGYY1837 pKa = 9.48GQDD1840 pKa = 3.54VIVNGVAGNAGPSGQLTLGAGLSAANLRR1868 pKa = 11.84FVQSGNDD1875 pKa = 3.41LVIEE1879 pKa = 4.13VLGTTEE1885 pKa = 4.03QVTVQDD1891 pKa = 3.84WFQAGASYY1899 pKa = 10.56RR1900 pKa = 11.84QLATIALADD1909 pKa = 3.84GTTLSMTDD1917 pKa = 3.21VNGLVAEE1924 pKa = 4.35GHH1926 pKa = 6.69DD1927 pKa = 4.18WTPLSTPSASTSPTLAGRR1945 pKa = 11.84YY1946 pKa = 8.82VYY1948 pKa = 10.02IRR1950 pKa = 11.84KK1951 pKa = 9.3NDD1953 pKa = 3.65GASTGLVTSEE1963 pKa = 3.64IQVWGTDD1970 pKa = 3.5GSDD1973 pKa = 3.22LALGKK1978 pKa = 10.29AVTSSPSWGDD1988 pKa = 2.85GTTAVNAVNGSTSASGGIFASASADD2013 pKa = 2.79GWVEE2017 pKa = 3.59VDD2019 pKa = 3.89LGSVQTIAGVDD2030 pKa = 2.94VWGRR2034 pKa = 11.84DD2035 pKa = 3.62DD2036 pKa = 5.56GSEE2039 pKa = 4.05EE2040 pKa = 3.9MNGNYY2045 pKa = 8.4TVYY2048 pKa = 10.74VSNQDD2053 pKa = 3.16MGGLDD2058 pKa = 3.73AGQLQAVPGARR2069 pKa = 11.84AYY2071 pKa = 10.35QEE2073 pKa = 4.16NQPGPMDD2080 pKa = 3.56VKK2082 pKa = 9.52VTSWQAPSTVTQTTGRR2098 pKa = 11.84YY2099 pKa = 8.82VYY2101 pKa = 10.43VRR2103 pKa = 11.84KK2104 pKa = 10.0NDD2106 pKa = 3.65GASTGLVTSEE2116 pKa = 3.74IQVWGAGGVDD2126 pKa = 3.66LALGKK2131 pKa = 8.44TVTSSSSWSSDD2142 pKa = 2.62TTAANAINGVTSASGGLFASASLDD2166 pKa = 3.03GWIEE2170 pKa = 3.67IDD2172 pKa = 3.81LGSVQAIDD2180 pKa = 5.94GIDD2183 pKa = 2.9VWGRR2187 pKa = 11.84DD2188 pKa = 3.36DD2189 pKa = 5.73GAFEE2193 pKa = 4.27MNGDD2197 pKa = 3.53YY2198 pKa = 10.24TVYY2201 pKa = 10.79VSNQDD2206 pKa = 3.73LAGLDD2211 pKa = 3.4ASQIQASVPNVQRR2224 pKa = 11.84FQQNDD2229 pKa = 3.34RR2230 pKa = 11.84GPNDD2234 pKa = 3.38VAVSSWQAPTALAATAGRR2252 pKa = 11.84YY2253 pKa = 9.12VYY2255 pKa = 10.45VRR2257 pKa = 11.84KK2258 pKa = 10.0NDD2260 pKa = 3.65GASTGLVTSEE2270 pKa = 3.8IQVWGADD2277 pKa = 3.61GSDD2280 pKa = 3.23LALGKK2285 pKa = 8.41TVTSSTSWGDD2295 pKa = 3.15STMAANAVNGSTGASGGIFASASADD2320 pKa = 2.83GWIEE2324 pKa = 3.73VDD2326 pKa = 3.64LGSVQTINGIDD2337 pKa = 3.0VWGRR2341 pKa = 11.84DD2342 pKa = 4.31DD2343 pKa = 5.46GALDD2347 pKa = 3.39MNGNYY2352 pKa = 8.38TVYY2355 pKa = 10.8VSNQDD2360 pKa = 3.75LAGLSAAQAQATAGVKK2376 pKa = 9.66QFQQSQQSQQGALDD2390 pKa = 3.71TAVTSWQTPATAATTLGRR2408 pKa = 11.84YY2409 pKa = 9.26VYY2411 pKa = 10.43VRR2413 pKa = 11.84KK2414 pKa = 10.0NDD2416 pKa = 3.65GASTGLVTSEE2426 pKa = 3.64IQVWGTDD2433 pKa = 3.5GSDD2436 pKa = 3.11LALGKK2441 pKa = 8.45TVTSSKK2447 pKa = 10.5SWGDD2451 pKa = 3.19STTAANAINGVTSASGGIFASASADD2476 pKa = 2.82GWVEE2480 pKa = 3.42IDD2482 pKa = 4.41LGSAQTIAGIDD2493 pKa = 3.04VWGRR2497 pKa = 11.84DD2498 pKa = 4.31DD2499 pKa = 5.46GALDD2503 pKa = 3.39MNGNYY2508 pKa = 8.89TVFVSNQDD2516 pKa = 3.46MAGLDD2521 pKa = 3.56ANQIQSISGAKK2532 pKa = 9.94AFQQNQQGPLDD2543 pKa = 3.75VSVTSWQSAAGSMVQAMAAFSSSSAGATNTTFVPQTQQSSMLAASMQQ2590 pKa = 3.38

Molecular weight:
261.92 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0B6RS76|A0A0B6RS76_BURPL Uncharacterized protein OS=Burkholderia plantarii OX=41899 GN=BGL_2c01060 PE=4 SV=1
MM1 pKa = 7.59SFRR4 pKa = 11.84LTSRR8 pKa = 11.84LHH10 pKa = 5.28RR11 pKa = 11.84AARR14 pKa = 11.84RR15 pKa = 11.84LSQLEE20 pKa = 3.55PRR22 pKa = 11.84RR23 pKa = 11.84IVRR26 pKa = 11.84TLRR29 pKa = 11.84HH30 pKa = 4.88HH31 pKa = 5.53QARR34 pKa = 11.84TRR36 pKa = 11.84ALATRR41 pKa = 11.84AVASTPRR48 pKa = 11.84LDD50 pKa = 4.77GLRR53 pKa = 11.84AWLHH57 pKa = 5.75SFLAAMRR64 pKa = 11.84AHH66 pKa = 6.93AGARR70 pKa = 11.84RR71 pKa = 11.84LGLPALLRR79 pKa = 11.84KK80 pKa = 9.51PSSLRR85 pKa = 11.84LLALRR90 pKa = 11.84RR91 pKa = 11.84ANGPRR96 pKa = 11.84RR97 pKa = 11.84RR98 pKa = 11.84VNRR101 pKa = 11.84PRR103 pKa = 11.84RR104 pKa = 11.84LSASPGWFAFGARR117 pKa = 3.97

Molecular weight:
13.38 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6432

0

6432

2225259

44

7858

346.0

37.29

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.097 ± 0.058

0.89 ± 0.011

5.595 ± 0.027

4.877 ± 0.035

3.529 ± 0.019

8.575 ± 0.039

2.341 ± 0.016

4.305 ± 0.024

2.426 ± 0.029

10.345 ± 0.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.129 ± 0.016

2.472 ± 0.024

5.472 ± 0.029

3.321 ± 0.02

7.718 ± 0.044

5.393 ± 0.059

5.308 ± 0.037

7.516 ± 0.024

1.36 ± 0.012

2.333 ± 0.016

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski