Psittacine adenovirus 3

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Atadenovirus; Psittacine atadenovirus A

Average proteome isoelectric point is 6.89

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 29 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A7JW93|A0A0A7JW93_9ADEN Uncharacterized protein OS=Psittacine adenovirus 3 OX=1580497 GN=PAV19gp24 PE=4 SV=1
MM1 pKa = 7.01QPAAKK6 pKa = 9.87RR7 pKa = 11.84PRR9 pKa = 11.84DD10 pKa = 3.47EE11 pKa = 4.5SSAVDD16 pKa = 3.45LVYY19 pKa = 10.68PFDD22 pKa = 4.0EE23 pKa = 4.96AVTAPLPPFIDD34 pKa = 3.08VGGGLEE40 pKa = 4.2TEE42 pKa = 4.31GLKK45 pKa = 10.92LSLNVSSPLTLRR57 pKa = 11.84NNAVALKK64 pKa = 9.48IGSGLSVDD72 pKa = 4.14SSGALQAAAAASVSPPLSNSGGTLHH97 pKa = 7.01LSVGSGLTVADD108 pKa = 3.92GALASSLTASPPLSISGDD126 pKa = 3.66TLALAVGNGLAVSGGVLASSLNPAPPLQLLGDD158 pKa = 4.68SISLSLGSGLAVQSGALVSSPAVTAPVTITNGALGLSVGDD198 pKa = 3.53GLTVRR203 pKa = 11.84EE204 pKa = 4.81GSLQAPTEE212 pKa = 4.15MFSAVQGWDD221 pKa = 3.13TLDD224 pKa = 3.47NFSAVNIVSSAGVKK238 pKa = 9.95FPASVFCEE246 pKa = 3.69RR247 pKa = 11.84LNIRR251 pKa = 11.84GLVVCTMALKK261 pKa = 10.7LDD263 pKa = 3.8TSQWSSYY270 pKa = 10.52GSTAPSSDD278 pKa = 3.07FVFRR282 pKa = 11.84LGEE285 pKa = 4.13LFNSGVPSTYY295 pKa = 10.25VPASAGSSYY304 pKa = 9.62LTPHH308 pKa = 6.68GGITTSTTSQSSGYY322 pKa = 9.77VSPEE326 pKa = 3.43GGTVVVFRR334 pKa = 11.84PACSGAWANQFDD346 pKa = 4.21VSQCTIVFPSEE357 pKa = 4.02GGTVLHH363 pKa = 7.1FSLQNKK369 pKa = 9.43SGQTNYY375 pKa = 10.66LFTPGITGTMLIYY388 pKa = 10.1PISFSYY394 pKa = 10.55LAANSLL400 pKa = 3.8

Molecular weight: 40.26 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A7JTS9|A0A0A7JTS9_9ADEN 100K OS=Psittacine adenovirus 3 OX=1580497 GN=PAV19gp15 PE=4 SV=1
MM1 pKa = 8.02RR2 pKa = 11.84KK3 pKa = 8.11RR4 pKa = 11.84TGRR7 pKa = 11.84SRR9 pKa = 11.84RR10 pKa = 11.84KK11 pKa = 9.22RR12 pKa = 11.84LSIVFGRR19 pKa = 11.84PRR21 pKa = 11.84LCRR24 pKa = 11.84SNRR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84LKK31 pKa = 10.98GGFLPLLIPLISAAIGAAPAIASTVIAAKK60 pKa = 9.87NARR63 pKa = 11.84RR64 pKa = 11.84HH65 pKa = 4.6

Molecular weight: 7.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

29

0

29

9690

54

1077

334.1

37.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.07 ± 0.484

2.632 ± 0.436

4.933 ± 0.265

5.459 ± 0.475

3.963 ± 0.208

6.347 ± 0.4

1.992 ± 0.219

4.076 ± 0.237

3.633 ± 0.405

9.556 ± 0.409

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.167 ± 0.158

4.241 ± 0.436

6.491 ± 0.307

3.849 ± 0.261

7.079 ± 0.576

7.833 ± 0.422

6.13 ± 0.341

6.584 ± 0.222

1.352 ± 0.126

3.612 ± 0.341
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski