Macaca nemestrina herpesvirus 7

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus; Macacine betaherpesvirus 9

Average proteome isoelectric point is 6.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 83 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A191S3V9|A0A191S3V9_9BETA Uracil-DNA glycosylase OS=Macaca nemestrina herpesvirus 7 OX=1846169 GN=U81 PE=3 SV=1
MM1 pKa = 6.23QTNIYY6 pKa = 10.37FCFFFNFSTSLYY18 pKa = 10.68ALFNNSYY25 pKa = 10.47YY26 pKa = 9.78STLGKK31 pKa = 10.45EE32 pKa = 4.79CINAIKK38 pKa = 10.63NCTQSEE44 pKa = 4.35RR45 pKa = 11.84PILLEE50 pKa = 5.52PIDD53 pKa = 4.15QAPTPNPDD61 pKa = 3.53VISGLLYY68 pKa = 7.12YY69 pKa = 9.99TPYY72 pKa = 11.03SFDD75 pKa = 3.52EE76 pKa = 4.34YY77 pKa = 11.08QVLVDD82 pKa = 4.79EE83 pKa = 5.05EE84 pKa = 4.42FLNTFYY90 pKa = 11.65LLYY93 pKa = 10.75NNPNQLHH100 pKa = 5.71VLFSLIKK107 pKa = 9.77DD108 pKa = 3.95SKK110 pKa = 11.25SKK112 pKa = 10.97SSWLGFLNSFEE123 pKa = 4.81KK124 pKa = 10.87CFSDD128 pKa = 3.81NTIITCRR135 pKa = 11.84NQVCKK140 pKa = 9.96TYY142 pKa = 10.52SYY144 pKa = 11.45EE145 pKa = 4.02NLKK148 pKa = 8.55YY149 pKa = 8.93TPNIFVEE156 pKa = 4.43NIIGFEE162 pKa = 4.06FYY164 pKa = 10.35ISEE167 pKa = 4.27NNLDD171 pKa = 3.44VSFNSSILIYY181 pKa = 10.17LQNEE185 pKa = 3.66EE186 pKa = 4.0TRR188 pKa = 11.84AKK190 pKa = 10.33KK191 pKa = 9.53IVKK194 pKa = 9.73IMYY197 pKa = 9.53EE198 pKa = 4.28GINVFDD204 pKa = 4.72ALLNSMRR211 pKa = 11.84YY212 pKa = 9.4FSQKK216 pKa = 9.96FQFSFDD222 pKa = 3.67FPLLRR227 pKa = 11.84EE228 pKa = 4.08MEE230 pKa = 4.58SYY232 pKa = 11.62NDD234 pKa = 3.8LLPFRR239 pKa = 11.84SEE241 pKa = 3.87PSNLLIRR248 pKa = 11.84THH250 pKa = 6.33

Molecular weight: 29.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A192XPA1|A0A192XPA1_9BETA Capsid scaffold protein OS=Macaca nemestrina herpesvirus 7 OX=1846169 GN=U53.5 PE=4 SV=1
MM1 pKa = 7.68SLEE4 pKa = 4.18HH5 pKa = 6.66LPAIRR10 pKa = 11.84KK11 pKa = 9.48CIGQYY16 pKa = 9.19NHH18 pKa = 6.03LRR20 pKa = 11.84IYY22 pKa = 10.87KK23 pKa = 9.63KK24 pKa = 10.42ILMLKK29 pKa = 10.66SNFTEE34 pKa = 4.42LNFFLGNIFPHH45 pKa = 6.58EE46 pKa = 4.05LQTSKK51 pKa = 10.16IHH53 pKa = 6.12VFFEE57 pKa = 4.22VTLGNRR63 pKa = 11.84IPDD66 pKa = 4.28CIIVLNHH73 pKa = 6.05LNEE76 pKa = 3.89NRR78 pKa = 11.84VNEE81 pKa = 3.53IHH83 pKa = 7.42LYY85 pKa = 9.69FFEE88 pKa = 5.1FKK90 pKa = 8.42TTFAKK95 pKa = 9.49STLFSIQKK103 pKa = 8.31NTTQKK108 pKa = 10.63LQYY111 pKa = 10.46LQGLKK116 pKa = 9.92QLQEE120 pKa = 3.66ATKK123 pKa = 10.42FLEE126 pKa = 3.92QYY128 pKa = 10.18LIKK131 pKa = 10.96NEE133 pKa = 4.3TTCKK137 pKa = 9.4ISPVICFFRR146 pKa = 11.84QRR148 pKa = 11.84GLKK151 pKa = 10.08LDD153 pKa = 3.8FVKK156 pKa = 10.3TFVSKK161 pKa = 10.42EE162 pKa = 4.06LQLSLPFILNLLAQFEE178 pKa = 4.54NDD180 pKa = 3.46TVKK183 pKa = 10.88SILSISDD190 pKa = 3.17TAHH193 pKa = 6.78FRR195 pKa = 11.84RR196 pKa = 11.84ACQKK200 pKa = 9.88YY201 pKa = 8.52SHH203 pKa = 6.29LQRR206 pKa = 11.84RR207 pKa = 11.84RR208 pKa = 11.84NSKK211 pKa = 9.21TSTNRR216 pKa = 11.84SNNTAKK222 pKa = 10.71KK223 pKa = 9.97KK224 pKa = 10.16RR225 pKa = 11.84RR226 pKa = 11.84NPKK229 pKa = 9.65KK230 pKa = 10.49

Molecular weight: 27.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

83

0

83

39259

54

2056

473.0

54.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.584 ± 0.135

2.455 ± 0.164

4.791 ± 0.145

6.106 ± 0.197

6.371 ± 0.198

3.169 ± 0.172

2.394 ± 0.08

8.559 ± 0.244

7.496 ± 0.236

10.479 ± 0.226

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.198 ± 0.084

7.181 ± 0.197

3.505 ± 0.152

3.747 ± 0.15

3.691 ± 0.209

7.996 ± 0.248

6.218 ± 0.183

5.24 ± 0.155

0.769 ± 0.059

4.053 ± 0.123
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski