Ceraceosorus bombacis

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Exobasidiomycetes; Ceraceosorales; Ceraceosoraceae; Ceraceosorus

Average proteome isoelectric point is 7.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8017 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0P1BRA5|A0A0P1BRA5_9BASI Uncharacterized protein OS=Ceraceosorus bombacis OX=401625 PE=4 SV=1
MM1 pKa = 8.18DD2 pKa = 4.64SFINKK7 pKa = 9.65AKK9 pKa = 10.75DD10 pKa = 3.3FAEE13 pKa = 4.16SDD15 pKa = 3.39QGKK18 pKa = 9.49GLINKK23 pKa = 9.51ALGNQGNQDD32 pKa = 3.42NQNSYY37 pKa = 10.64GGNNSSSNNDD47 pKa = 3.05SYY49 pKa = 12.18GSGNNSSSTGGFGSSNNDD67 pKa = 3.06NNDD70 pKa = 3.15SYY72 pKa = 12.2GSGNKK77 pKa = 9.5SSSGGGFGGSSDD89 pKa = 3.98NYY91 pKa = 9.62GSSGGRR97 pKa = 11.84DD98 pKa = 3.39NNDD101 pKa = 3.01SYY103 pKa = 11.79GSSGGRR109 pKa = 11.84DD110 pKa = 3.39NNDD113 pKa = 3.01SYY115 pKa = 11.79GSSGGRR121 pKa = 11.84DD122 pKa = 3.35NNNSYY127 pKa = 10.78GSSGGRR133 pKa = 11.84DD134 pKa = 3.39NNDD137 pKa = 3.01SYY139 pKa = 11.78GSSGGRR145 pKa = 11.84GNNDD149 pKa = 2.85SYY151 pKa = 11.81GSSGGNNDD159 pKa = 3.48SYY161 pKa = 11.52GSSGGRR167 pKa = 11.84DD168 pKa = 3.39NNDD171 pKa = 3.01SYY173 pKa = 11.79GSSGGRR179 pKa = 11.84DD180 pKa = 3.18NSDD183 pKa = 3.37SYY185 pKa = 11.63GSSGGRR191 pKa = 11.84GNNDD195 pKa = 2.69SFGGSGGNSGGFGSSGNDD213 pKa = 2.92NSSYY217 pKa = 10.88GGNSGTDD224 pKa = 3.29SYY226 pKa = 11.96GSGGRR231 pKa = 11.84QGGGNSDD238 pKa = 3.84SYY240 pKa = 12.03GSGGNDD246 pKa = 2.73NNYY249 pKa = 10.66

Molecular weight: 24.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0P1BJ97|A0A0P1BJ97_9BASI Uncharacterized protein OS=Ceraceosorus bombacis OX=401625 PE=4 SV=1
MM1 pKa = 7.72ASNARR6 pKa = 11.84GGRR9 pKa = 11.84GGGPGASQRR18 pKa = 11.84LSATPTGNWRR28 pKa = 11.84TGGPNGAASGASPAGGAGSRR48 pKa = 11.84WAAGPPRR55 pKa = 11.84NNQSAQNGNAXX66 pKa = 3.86

Molecular weight: 6.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8017

0

8017

3982424

49

5271

496.7

53.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.34 ± 0.03

1.018 ± 0.011

5.451 ± 0.016

5.87 ± 0.026

3.022 ± 0.016

7.319 ± 0.028

2.569 ± 0.015

3.778 ± 0.018

4.199 ± 0.025

8.952 ± 0.034

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.835 ± 0.009

2.957 ± 0.012

6.12 ± 0.033

4.192 ± 0.016

6.97 ± 0.026

9.808 ± 0.046

5.582 ± 0.016

5.702 ± 0.018

1.261 ± 0.01

2.045 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski