Tortoise microvirus 39

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W6F9|A0A4P8W6F9_9VIRU Uncharacterized protein OS=Tortoise microvirus 39 OX=2583142 PE=4 SV=1
MM1 pKa = 7.21RR2 pKa = 11.84TSPVPVQRR10 pKa = 11.84TMRR13 pKa = 11.84RR14 pKa = 11.84HH15 pKa = 5.58DD16 pKa = 4.11LKK18 pKa = 11.47VLTSLPAGKK27 pKa = 9.52FVPLAAVPLLRR38 pKa = 11.84EE39 pKa = 4.22DD40 pKa = 3.63AVTRR44 pKa = 11.84LNGTISFEE52 pKa = 3.85MSEE55 pKa = 4.26TVEE58 pKa = 3.79ILMNAVNVRR67 pKa = 11.84VMAYY71 pKa = 9.58LVPFLAFEE79 pKa = 4.64RR80 pKa = 11.84FAGMDD85 pKa = 3.76DD86 pKa = 4.68LNRR89 pKa = 11.84SYY91 pKa = 11.4QKK93 pKa = 11.03VPMKK97 pKa = 10.79DD98 pKa = 3.39GDD100 pKa = 3.82PVIPFFEE107 pKa = 4.78SMVAPAHH114 pKa = 5.66GANPILTYY122 pKa = 9.63MGKK125 pKa = 8.94HH126 pKa = 5.81CRR128 pKa = 11.84PGTNINSAYY137 pKa = 9.63IEE139 pKa = 4.61AYY141 pKa = 8.58NAVWNFRR148 pKa = 11.84AKK150 pKa = 10.38NRR152 pKa = 11.84SPNITQRR159 pKa = 11.84TRR161 pKa = 11.84LEE163 pKa = 3.92ATLAPAFWLHH173 pKa = 6.62SNFNHH178 pKa = 5.72VVPDD182 pKa = 3.91FDD184 pKa = 3.59QAVIDD189 pKa = 4.87GEE191 pKa = 4.48VALNSAQVNLALKK204 pKa = 10.19NADD207 pKa = 3.86GTPGSAPVSVTGASLTVNSATSSTRR232 pKa = 11.84AVQMNNTGQLVYY244 pKa = 10.72AGSPLAAAAGVTGLGGLTADD264 pKa = 4.85LAAITAEE271 pKa = 4.07LQQDD275 pKa = 4.91GITISLSNIEE285 pKa = 4.05LARR288 pKa = 11.84RR289 pKa = 11.84TQAFAKK295 pKa = 10.31LRR297 pKa = 11.84AQYY300 pKa = 9.85HH301 pKa = 4.72GHH303 pKa = 5.68SDD305 pKa = 3.46EE306 pKa = 4.76YY307 pKa = 10.8IIDD310 pKa = 4.05LLMSGISVPEE320 pKa = 4.03QAWKK324 pKa = 10.57QPILLADD331 pKa = 3.37EE332 pKa = 4.24HH333 pKa = 6.95TIFGMSKK340 pKa = 10.01RR341 pKa = 11.84YY342 pKa = 10.09ASDD345 pKa = 3.21AANLTEE351 pKa = 4.22SVVNGGTVIDD361 pKa = 4.8LSVSVPRR368 pKa = 11.84VPTGGVVMLFAEE380 pKa = 4.62ITPEE384 pKa = 3.85QLFEE388 pKa = 4.21RR389 pKa = 11.84MKK391 pKa = 11.25DD392 pKa = 3.66PFLHH396 pKa = 7.02ALDD399 pKa = 4.83PQDD402 pKa = 4.94DD403 pKa = 4.06LPEE406 pKa = 4.27FVRR409 pKa = 11.84DD410 pKa = 3.48TLDD413 pKa = 3.51PEE415 pKa = 4.37KK416 pKa = 11.04VSVVPCEE423 pKa = 4.15YY424 pKa = 11.11VDD426 pKa = 4.11MDD428 pKa = 4.69HH429 pKa = 7.26DD430 pKa = 4.49TPDD433 pKa = 3.27STFGYY438 pKa = 10.89APLNYY443 pKa = 9.41EE444 pKa = 3.95WAQNSPQIGGRR455 pKa = 11.84FYY457 pKa = 11.2RR458 pKa = 11.84PAVDD462 pKa = 3.43AAFDD466 pKa = 3.88EE467 pKa = 4.45DD468 pKa = 3.97RR469 pKa = 11.84QRR471 pKa = 11.84IWAVEE476 pKa = 4.16TQNPTLSEE484 pKa = 3.99DD485 pKa = 4.19FYY487 pKa = 11.6LCTTMHH493 pKa = 6.09QKK495 pKa = 10.5PFVVTNVDD503 pKa = 3.2PFEE506 pKa = 5.02ALLRR510 pKa = 11.84GEE512 pKa = 5.11AIISGNTVFGGLLVEE527 pKa = 5.22ANDD530 pKa = 4.76DD531 pKa = 3.98YY532 pKa = 12.24AEE534 pKa = 4.31VAAKK538 pKa = 10.64APVDD542 pKa = 4.49RR543 pKa = 11.84IVKK546 pKa = 9.08PAA548 pKa = 3.47

Molecular weight: 59.84 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W9P3|A0A4P8W9P3_9VIRU Uncharacterized protein OS=Tortoise microvirus 39 OX=2583142 PE=4 SV=1
MM1 pKa = 7.58EE2 pKa = 5.55GNMSKK7 pKa = 10.72SNKK10 pKa = 8.22EE11 pKa = 3.32RR12 pKa = 11.84QAQYY16 pKa = 10.27RR17 pKa = 11.84AKK19 pKa = 10.56LEE21 pKa = 4.27SLGQTNVTGIVNYY34 pKa = 8.01TQVGDD39 pKa = 3.7VLILLRR45 pKa = 11.84RR46 pKa = 11.84LRR48 pKa = 11.84DD49 pKa = 3.7NPDD52 pKa = 3.39LEE54 pKa = 4.51VGLIRR59 pKa = 11.84NTRR62 pKa = 11.84TGRR65 pKa = 11.84YY66 pKa = 7.34EE67 pKa = 3.79KK68 pKa = 10.96LL69 pKa = 3.29

Molecular weight: 7.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1717

67

548

245.3

27.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.25 ± 0.836

0.815 ± 0.43

5.649 ± 0.364

5.591 ± 0.684

3.844 ± 0.372

7.804 ± 0.775

2.854 ± 0.616

3.378 ± 0.328

3.902 ± 0.365

7.921 ± 0.476

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.97 ± 0.289

4.601 ± 0.497

5.591 ± 0.592

4.252 ± 0.349

7.338 ± 0.77

4.543 ± 0.535

6.057 ± 0.5

7.455 ± 0.735

1.864 ± 0.381

3.32 ± 0.792
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski