Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2)

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium; Coriobacterium glomerans

Average proteome isoelectric point is 6.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1768 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F2N9R7|F2N9R7_CORGP Uncharacterized protein OS=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) OX=700015 GN=Corgl_1062 PE=3 SV=1
MM1 pKa = 7.53ALIDD5 pKa = 4.31PVLIDD10 pKa = 3.65LTGKK14 pKa = 10.67AEE16 pKa = 4.27GPGEE20 pKa = 4.15SFTFSGHH27 pKa = 6.06AAASGYY33 pKa = 11.39DD34 pKa = 3.05MGEE37 pKa = 3.67RR38 pKa = 11.84HH39 pKa = 6.81LEE41 pKa = 4.21LEE43 pKa = 5.03DD44 pKa = 3.81GLSFEE49 pKa = 4.94VAFTNTGDD57 pKa = 4.34GILLTGMVRR66 pKa = 11.84GRR68 pKa = 11.84AAGVCDD74 pKa = 3.37RR75 pKa = 11.84CLDD78 pKa = 3.51VARR81 pKa = 11.84IDD83 pKa = 3.16IAGAIEE89 pKa = 4.39EE90 pKa = 4.76YY91 pKa = 10.89YY92 pKa = 11.08LLEE95 pKa = 4.73KK96 pKa = 10.46PHH98 pKa = 7.4DD99 pKa = 3.91PTCYY103 pKa = 9.92EE104 pKa = 4.99DD105 pKa = 4.68GFEE108 pKa = 4.61LLGSDD113 pKa = 4.63RR114 pKa = 11.84VVDD117 pKa = 4.5LAAPLSDD124 pKa = 4.95AVITDD129 pKa = 3.52TPFALLCSPDD139 pKa = 3.74CAGLCPVCGCNLNHH153 pKa = 7.4AACDD157 pKa = 3.73CMTDD161 pKa = 3.15SFDD164 pKa = 3.42VARR167 pKa = 11.84SGEE170 pKa = 4.17EE171 pKa = 3.95SPFAALRR178 pKa = 11.84DD179 pKa = 3.94LEE181 pKa = 4.66IEE183 pKa = 4.12

Molecular weight: 19.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F2N9H1|F2N9H1_CORGP Ribosome-recycling factor OS=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) OX=700015 GN=frr PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.42RR3 pKa = 11.84TYY5 pKa = 10.34QPNKK9 pKa = 8.64RR10 pKa = 11.84KK11 pKa = 9.51RR12 pKa = 11.84AKK14 pKa = 9.92SHH16 pKa = 5.28GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.27GGRR28 pKa = 11.84AVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.9GRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84LTVV44 pKa = 2.76

Molecular weight: 5.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1768

0

1768

613803

30

1560

347.2

37.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.264 ± 0.077

1.596 ± 0.025

6.286 ± 0.054

6.032 ± 0.06

3.662 ± 0.04

8.109 ± 0.048

1.986 ± 0.027

6.115 ± 0.049

3.156 ± 0.046

9.414 ± 0.062

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.664 ± 0.028

2.559 ± 0.034

4.209 ± 0.031

2.76 ± 0.031

7.313 ± 0.064

6.7 ± 0.049

5.141 ± 0.039

7.434 ± 0.049

1.03 ± 0.021

2.569 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski