Tortoise microvirus 106

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W705|A0A4P8W705_9VIRU DNA pilot protein OS=Tortoise microvirus 106 OX=2583106 PE=4 SV=1
MM1 pKa = 7.55NSNKK5 pKa = 9.44TKK7 pKa = 10.99GNIFQNVLSADD18 pKa = 3.81VPQSQFDD25 pKa = 3.66LSFEE29 pKa = 4.24NKK31 pKa = 8.27LTCDD35 pKa = 3.43MGEE38 pKa = 5.22LIPICCQEE46 pKa = 4.5ILPGDD51 pKa = 4.08KK52 pKa = 10.17FQCDD56 pKa = 3.31ANVFIRR62 pKa = 11.84FQPLIAPIMHH72 pKa = 7.01NIDD75 pKa = 3.06VHH77 pKa = 5.64VRR79 pKa = 11.84WFFVPNRR86 pKa = 11.84LVWNEE91 pKa = 3.75FEE93 pKa = 5.42DD94 pKa = 5.42FITGGTTGMEE104 pKa = 4.21SPIYY108 pKa = 9.66PYY110 pKa = 10.46RR111 pKa = 11.84EE112 pKa = 4.06YY113 pKa = 11.06KK114 pKa = 10.28EE115 pKa = 4.17SARR118 pKa = 11.84LGSLEE123 pKa = 5.27DD124 pKa = 3.73YY125 pKa = 10.88LGVPTEE131 pKa = 4.25TPEE134 pKa = 4.73GLFGMHH140 pKa = 6.89NIIVNMLPFRR150 pKa = 11.84GYY152 pKa = 10.25ALIWNEE158 pKa = 3.64YY159 pKa = 10.36FRR161 pKa = 11.84DD162 pKa = 3.68QTLDD166 pKa = 3.12TEE168 pKa = 4.44MEE170 pKa = 3.98IARR173 pKa = 11.84GSGEE177 pKa = 3.87DD178 pKa = 3.17TKK180 pKa = 11.32DD181 pKa = 3.18YY182 pKa = 10.74FLRR185 pKa = 11.84RR186 pKa = 11.84VRR188 pKa = 11.84WEE190 pKa = 3.41KK191 pKa = 11.2DD192 pKa = 3.24YY193 pKa = 9.28FTSALPWTQRR203 pKa = 11.84GEE205 pKa = 4.2PVHH208 pKa = 6.08MPPMTLRR215 pKa = 11.84EE216 pKa = 4.14GLHH219 pKa = 6.85PDD221 pKa = 3.32MVIQDD226 pKa = 4.27TIRR229 pKa = 11.84IVDD232 pKa = 3.47ASGNTFSYY240 pKa = 10.65PEE242 pKa = 3.94NPLYY246 pKa = 10.83GNPYY250 pKa = 10.17RR251 pKa = 11.84LGHH254 pKa = 5.45QSGVVTDD261 pKa = 4.65PNEE264 pKa = 3.84KK265 pKa = 10.33PIFFDD270 pKa = 4.71FSAYY274 pKa = 10.31DD275 pKa = 3.37SYY277 pKa = 11.6TINQLRR283 pKa = 11.84EE284 pKa = 3.84ANAVQRR290 pKa = 11.84FLEE293 pKa = 4.33RR294 pKa = 11.84QAVGGARR301 pKa = 11.84YY302 pKa = 10.24AEE304 pKa = 3.99TLLNHH309 pKa = 6.81FGVRR313 pKa = 11.84TADD316 pKa = 3.31SRR318 pKa = 11.84LQRR321 pKa = 11.84PEE323 pKa = 3.5YY324 pKa = 10.45LGGHH328 pKa = 5.73RR329 pKa = 11.84QPVTVSEE336 pKa = 4.37VLQQSEE342 pKa = 4.63SSATSPQGNMAGRR355 pKa = 11.84AISTGSFGSEE365 pKa = 3.38STLFTEE371 pKa = 4.56HH372 pKa = 7.02GYY374 pKa = 11.06LFGLMYY380 pKa = 10.47VRR382 pKa = 11.84PQTGYY387 pKa = 8.53TNTFKK392 pKa = 11.23KK393 pKa = 9.75MLHH396 pKa = 5.27QKK398 pKa = 10.28ADD400 pKa = 3.34KK401 pKa = 10.35FDD403 pKa = 4.04YY404 pKa = 10.38AWPEE408 pKa = 3.78FASLGEE414 pKa = 3.93QEE416 pKa = 4.49ILQKK420 pKa = 10.13EE421 pKa = 4.48VHH423 pKa = 5.86VGTRR427 pKa = 11.84TGLEE431 pKa = 4.07SNNVFGYY438 pKa = 7.5QSRR441 pKa = 11.84YY442 pKa = 10.44AEE444 pKa = 3.83YY445 pKa = 10.54KK446 pKa = 9.1FNNNEE451 pKa = 3.63VHH453 pKa = 7.21GSFKK457 pKa = 10.61KK458 pKa = 10.55DD459 pKa = 3.03LSFWHH464 pKa = 7.13LARR467 pKa = 11.84LYY469 pKa = 10.86FRR471 pKa = 11.84DD472 pKa = 3.81YY473 pKa = 11.55DD474 pKa = 3.87PALDD478 pKa = 3.66ATFVACEE485 pKa = 3.74PRR487 pKa = 11.84KK488 pKa = 10.6DD489 pKa = 3.1IFAVVSEE496 pKa = 4.63DD497 pKa = 3.94RR498 pKa = 11.84NDD500 pKa = 3.52SLLVEE505 pKa = 4.72VYY507 pKa = 11.04NKK509 pKa = 8.52ITAIRR514 pKa = 11.84PLPAFGKK521 pKa = 9.92PSLL524 pKa = 4.01

Molecular weight: 60.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8WAH3|A0A4P8WAH3_9VIRU Uncharacterized protein OS=Tortoise microvirus 106 OX=2583106 PE=4 SV=1
MM1 pKa = 7.53LNIEE5 pKa = 5.16KK6 pKa = 10.67SLTTNNQYY14 pKa = 10.62IIFVHH19 pKa = 6.17SYY21 pKa = 9.66KK22 pKa = 10.68NYY24 pKa = 10.3TIMEE28 pKa = 4.31TLKK31 pKa = 11.04NLLNRR36 pKa = 11.84NDD38 pKa = 3.55VVRR41 pKa = 11.84LMKK44 pKa = 10.87NLDD47 pKa = 3.73GLSLPFLFFVKK58 pKa = 10.47PSDD61 pKa = 3.67RR62 pKa = 11.84SSRR65 pKa = 11.84WLLKK69 pKa = 9.39ASKK72 pKa = 10.27RR73 pKa = 11.84IGAFGSIKK81 pKa = 10.29DD82 pKa = 3.58ISEE85 pKa = 4.72SIPILDD91 pKa = 4.64LFTGKK96 pKa = 9.73IMAITVLVRR105 pKa = 11.84DD106 pKa = 3.47EE107 pKa = 4.11WFEE110 pKa = 4.26LFVMDD115 pKa = 4.99VPFSIKK121 pKa = 9.99KK122 pKa = 9.8EE123 pKa = 3.92KK124 pKa = 10.74LLLSLFLKK132 pKa = 10.6EE133 pKa = 4.05SGNRR137 pKa = 11.84RR138 pKa = 11.84SFSYY142 pKa = 11.11NNYY145 pKa = 9.43ILQLFNSLKK154 pKa = 10.71NKK156 pKa = 10.29SLL158 pKa = 3.56

Molecular weight: 18.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1316

119

524

263.2

30.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.015 ± 0.774

1.14 ± 0.489

5.015 ± 0.401

6.687 ± 0.401

4.635 ± 1.209

5.167 ± 0.937

2.052 ± 0.554

5.243 ± 0.698

6.535 ± 1.327

9.574 ± 1.304

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.888 ± 0.227

6.687 ± 1.009

5.167 ± 0.722

4.635 ± 0.904

5.775 ± 0.232

7.447 ± 0.953

4.787 ± 0.921

4.787 ± 0.655

1.292 ± 0.186

5.471 ± 0.798
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski