Microviridae sp. ctzVR26

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5Q2WAI5|A0A5Q2WAI5_9VIRU Uncharacterized protein OS=Microviridae sp. ctzVR26 OX=2656706 PE=4 SV=1
MM1 pKa = 7.68AEE3 pKa = 4.81KK4 pKa = 9.52IDD6 pKa = 3.85KK7 pKa = 9.0KK8 pKa = 8.72TGEE11 pKa = 4.45VIEE14 pKa = 4.35SGYY17 pKa = 10.88VKK19 pKa = 10.37PLVFDD24 pKa = 3.9SVEE27 pKa = 4.0SSLTKK32 pKa = 10.09FDD34 pKa = 3.09AHH36 pKa = 6.23GRR38 pKa = 11.84EE39 pKa = 4.23IPDD42 pKa = 3.41RR43 pKa = 11.84RR44 pKa = 11.84PLEE47 pKa = 4.01LLISLQTAVKK57 pKa = 9.93TNEE60 pKa = 3.83QKK62 pKa = 10.1MKK64 pKa = 10.59EE65 pKa = 4.26VIARR69 pKa = 11.84EE70 pKa = 4.02LNKK73 pKa = 10.16LARR76 pKa = 11.84ARR78 pKa = 11.84GFEE81 pKa = 4.07TLEE84 pKa = 3.95EE85 pKa = 4.49SNDD88 pKa = 3.24FSMEE92 pKa = 3.87TDD94 pKa = 3.76DD95 pKa = 4.44YY96 pKa = 11.54AALSGYY102 pKa = 8.94EE103 pKa = 3.91FSEE106 pKa = 4.17EE107 pKa = 3.78LSYY110 pKa = 10.43MDD112 pKa = 5.0KK113 pKa = 11.21APDD116 pKa = 3.41AAAPAAAPAAAPAPVPAPEE135 pKa = 4.22GAKK138 pKa = 10.33

Molecular weight: 15.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5Q2WAI5|A0A5Q2WAI5_9VIRU Uncharacterized protein OS=Microviridae sp. ctzVR26 OX=2656706 PE=4 SV=1
MM1 pKa = 7.75AKK3 pKa = 10.13PKK5 pKa = 10.36RR6 pKa = 11.84KK7 pKa = 9.47NLLVQNSYY15 pKa = 11.24LEE17 pKa = 4.3RR18 pKa = 11.84KK19 pKa = 9.57VLDD22 pKa = 3.64FAKK25 pKa = 10.38PRR27 pKa = 11.84LLVPLTLTKK36 pKa = 10.3TIADD40 pKa = 3.36ARR42 pKa = 11.84LYY44 pKa = 10.55RR45 pKa = 11.84PQPQIKK51 pKa = 9.4RR52 pKa = 11.84DD53 pKa = 3.54NYY55 pKa = 9.95LKK57 pKa = 10.83KK58 pKa = 10.64LVVLQSYY65 pKa = 9.88LKK67 pKa = 9.38SQKK70 pKa = 9.9RR71 pKa = 11.84PSGLTQGPFRR81 pKa = 11.84AFNNPSLAIRR91 pKa = 11.84MATCQSRR98 pKa = 11.84HH99 pKa = 4.09TRR101 pKa = 11.84KK102 pKa = 9.59EE103 pKa = 3.53VLHH106 pKa = 5.66ALKK109 pKa = 9.61RR110 pKa = 11.84TGKK113 pKa = 10.65GSGSKK118 pKa = 9.74PRR120 pKa = 11.84RR121 pKa = 11.84HH122 pKa = 5.41SWKK125 pKa = 10.61SAIKK129 pKa = 10.37CC130 pKa = 3.67

Molecular weight: 14.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

1497

32

500

187.1

20.94

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.884 ± 1.001

0.534 ± 0.187

5.544 ± 0.64

5.544 ± 1.269

3.607 ± 0.535

7.214 ± 0.88

2.071 ± 0.583

4.208 ± 0.537

6.546 ± 1.329

9.018 ± 0.669

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.14 ± 0.484

4.409 ± 0.476

5.277 ± 0.763

3.874 ± 0.565

6.546 ± 0.873

6.413 ± 0.378

6.012 ± 0.854

6.079 ± 0.894

1.403 ± 0.395

3.674 ± 0.453
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski