Candidatus Electrothrix aarhusiensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Candidatus Electrothrix

Average proteome isoelectric point is 6.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4071 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A444ISR4|A0A444ISR4_9DELT PD-(D/E)XK nuclease superfamily protein OS=Candidatus Electrothrix aarhusiensis OX=1859131 GN=H206_02607 PE=4 SV=1
MM1 pKa = 8.19PDD3 pKa = 2.94RR4 pKa = 11.84TFGDD8 pKa = 3.33KK9 pKa = 10.87GVLITDD15 pKa = 4.52DD16 pKa = 5.3DD17 pKa = 4.92NDD19 pKa = 4.06TVFYY23 pKa = 10.8DD24 pKa = 3.54VLMTEE29 pKa = 4.45KK30 pKa = 9.83MIAATGVTVGEE41 pKa = 4.2EE42 pKa = 4.2EE43 pKa = 4.0MRR45 pKa = 11.84EE46 pKa = 4.02ALLITYY52 pKa = 8.9AQGDD56 pKa = 4.12GANSVQLFQQQVAAASEE73 pKa = 4.41GAAEE77 pKa = 4.08ATEE80 pKa = 4.38AADD83 pKa = 3.79EE84 pKa = 4.56DD85 pKa = 4.37SEE87 pKa = 4.35EE88 pKa = 4.51TEE90 pKa = 4.21TVAQIVTTEE99 pKa = 3.57VDD101 pKa = 3.23NEE103 pKa = 3.51EE104 pKa = 5.14DD105 pKa = 4.0YY106 pKa = 11.76AFSLAAADD114 pKa = 3.83AGSVVVVGASGAQEE128 pKa = 3.69IASAAVRR135 pKa = 11.84KK136 pKa = 7.8YY137 pKa = 9.38TIFQSSVTGSSWSTATGNASILTGDD162 pKa = 3.72AQNVTRR168 pKa = 11.84TTALIPGEE176 pKa = 4.18VLSGLGTVTEE186 pKa = 4.25RR187 pKa = 11.84GVVFSTDD194 pKa = 3.58PLPVLKK200 pKa = 10.78GSDD203 pKa = 3.46STTDD207 pKa = 3.29DD208 pKa = 3.69TTDD211 pKa = 3.44DD212 pKa = 3.96TTDD215 pKa = 3.49DD216 pKa = 3.85TTTDD220 pKa = 3.85DD221 pKa = 4.52DD222 pKa = 4.14TDD224 pKa = 3.6EE225 pKa = 4.62TGPSITSSTEE235 pKa = 3.69SSFLTTEE242 pKa = 3.76QVILVVSTDD251 pKa = 3.18EE252 pKa = 4.78NATCRR257 pKa = 11.84YY258 pKa = 7.88NVKK261 pKa = 10.29YY262 pKa = 10.84DD263 pKa = 3.56EE264 pKa = 5.97DD265 pKa = 4.09YY266 pKa = 11.86GEE268 pKa = 4.19MGGILSSSFGTGHH281 pKa = 6.95HH282 pKa = 6.29IVLGTLTEE290 pKa = 4.09GDD292 pKa = 3.44YY293 pKa = 11.01TFYY296 pKa = 11.07VRR298 pKa = 11.84CKK300 pKa = 10.42DD301 pKa = 3.34EE302 pKa = 4.45SGNISTAGTEE312 pKa = 3.88VTFAVSADD320 pKa = 3.57DD321 pKa = 3.01TGAPVRR327 pKa = 11.84SEE329 pKa = 4.55LSPSSTVSSTSVTLSLSTDD348 pKa = 3.01VAATCKK354 pKa = 9.76YY355 pKa = 5.36TTSDD359 pKa = 3.57SGMDD363 pKa = 3.54YY364 pKa = 11.61NDD366 pKa = 3.33MKK368 pKa = 11.2KK369 pKa = 10.34EE370 pKa = 3.74FDD372 pKa = 3.25ATGGISHH379 pKa = 6.45SEE381 pKa = 4.27SVSSLVVGEE390 pKa = 4.42SYY392 pKa = 10.3TYY394 pKa = 10.08YY395 pKa = 10.52VRR397 pKa = 11.84CKK399 pKa = 10.54SISTGVANTSSTEE412 pKa = 3.55ISFTVDD418 pKa = 3.32DD419 pKa = 4.58TDD421 pKa = 3.69STAPTITSTTSSTFAGTDD439 pKa = 3.48EE440 pKa = 4.86VILTVTTNEE449 pKa = 3.9TAYY452 pKa = 10.48CGYY455 pKa = 10.47SDD457 pKa = 4.73VYY459 pKa = 10.71SIDD462 pKa = 3.42MADD465 pKa = 3.67YY466 pKa = 8.77EE467 pKa = 4.79ANPMVTSDD475 pKa = 3.67GVTHH479 pKa = 6.84KK480 pKa = 10.97ASLGVLSTASYY491 pKa = 9.32TYY493 pKa = 10.94YY494 pKa = 10.0IGCYY498 pKa = 9.71DD499 pKa = 3.41EE500 pKa = 5.17SGNVTTFPAEE510 pKa = 3.65ILFDD514 pKa = 3.71VASLYY519 pKa = 10.99KK520 pKa = 10.71NSIFYY525 pKa = 10.95AEE527 pKa = 4.19NQVASSSPMKK537 pKa = 10.75AGFTTALEE545 pKa = 4.39SVGNLFVSTAIAQDD559 pKa = 3.6TTDD562 pKa = 3.82TTDD565 pKa = 2.87STTDD569 pKa = 3.02TTDD572 pKa = 3.88ADD574 pKa = 4.2TEE576 pKa = 4.19DD577 pKa = 4.2SNFLEE582 pKa = 4.75EE583 pKa = 4.48GSVDD587 pKa = 3.49EE588 pKa = 5.47GSGTGQFTSKK598 pKa = 11.13LEE600 pKa = 4.01DD601 pKa = 3.61LKK603 pKa = 11.22PGTFFYY609 pKa = 11.1ARR611 pKa = 11.84AYY613 pKa = 10.31AVIGGTTYY621 pKa = 10.97YY622 pKa = 10.9GNQISFQTADD632 pKa = 3.32SCFVATAAYY641 pKa = 10.02GSLFHH646 pKa = 7.09PAVQLLRR653 pKa = 11.84DD654 pKa = 3.59FRR656 pKa = 11.84DD657 pKa = 3.25RR658 pKa = 11.84FMLDD662 pKa = 3.18NPVSRR667 pKa = 11.84SMVRR671 pKa = 11.84LYY673 pKa = 10.95YY674 pKa = 10.24RR675 pKa = 11.84YY676 pKa = 9.76SPPIADD682 pKa = 4.02VISSNTVLRR691 pKa = 11.84PVTRR695 pKa = 11.84TLLLPIVGSAWLTMHH710 pKa = 7.15FGWLWLILPAATMALLSWFGMQRR733 pKa = 11.84MQAARR738 pKa = 11.84KK739 pKa = 9.57EE740 pKa = 4.17EE741 pKa = 4.0LAA743 pKa = 4.54

Molecular weight: 79.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3S3QQZ8|A0A3S3QQZ8_9DELT Uncharacterized protein OS=Candidatus Electrothrix aarhusiensis OX=1859131 GN=H206_01075 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.01RR4 pKa = 11.84TFQPSNLKK12 pKa = 10.14RR13 pKa = 11.84KK14 pKa = 8.66RR15 pKa = 11.84SHH17 pKa = 5.99GFRR20 pKa = 11.84VRR22 pKa = 11.84MKK24 pKa = 9.0TASGQAIIKK33 pKa = 9.81RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 9.88GRR40 pKa = 11.84KK41 pKa = 8.85RR42 pKa = 11.84LSAA45 pKa = 3.96

Molecular weight: 5.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4071

0

4071

1082977

21

1712

266.0

29.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.926 ± 0.04

1.389 ± 0.019

5.455 ± 0.043

6.806 ± 0.042

4.358 ± 0.031

6.973 ± 0.042

2.146 ± 0.018

6.485 ± 0.036

5.837 ± 0.044

10.425 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.496 ± 0.02

3.795 ± 0.032

4.277 ± 0.027

4.199 ± 0.031

5.424 ± 0.029

6.183 ± 0.034

5.215 ± 0.034

6.44 ± 0.033

1.14 ± 0.018

3.029 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski