Eel virus European X

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Perhabdovirus; Anguillid perhabdovirus

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E3P8Y9|E3P8Y9_9RHAB Matrix protein OS=Eel virus European X OX=685443 GN=M PE=4 SV=1
MM1 pKa = 7.7LSSNKK6 pKa = 9.74NKK8 pKa = 10.54NKK10 pKa = 9.91FDD12 pKa = 4.06LEE14 pKa = 4.66GIQLLAKK21 pKa = 9.49GVKK24 pKa = 9.47NAGEE28 pKa = 4.39SIDD31 pKa = 3.71RR32 pKa = 11.84ATDD35 pKa = 3.29EE36 pKa = 4.54KK37 pKa = 11.1PEE39 pKa = 4.25HH40 pKa = 6.59LSDD43 pKa = 3.96AFSKK47 pKa = 8.74YY48 pKa = 8.33TEE50 pKa = 4.15YY51 pKa = 11.13LSNEE55 pKa = 4.18SKK57 pKa = 11.03EE58 pKa = 4.13EE59 pKa = 3.91EE60 pKa = 3.87EE61 pKa = 5.03DD62 pKa = 3.84FQFEE66 pKa = 4.08QVDD69 pKa = 3.61YY70 pKa = 10.89GFQEE74 pKa = 4.35SPEE77 pKa = 4.46SNNPLQEE84 pKa = 3.7SWIAKK89 pKa = 9.99DD90 pKa = 4.5DD91 pKa = 4.23LEE93 pKa = 6.42PDD95 pKa = 3.32MGKK98 pKa = 9.4SWVEE102 pKa = 3.85YY103 pKa = 7.15QAKK106 pKa = 9.7MSFDD110 pKa = 3.62YY111 pKa = 11.28NEE113 pKa = 4.06QVKK116 pKa = 8.14PTVMRR121 pKa = 11.84EE122 pKa = 3.8INGLLGMLGGFAKK135 pKa = 10.61FQDD138 pKa = 3.73GKK140 pKa = 11.04KK141 pKa = 9.96EE142 pKa = 3.84YY143 pKa = 10.82LFYY146 pKa = 11.05LPEE149 pKa = 5.29KK150 pKa = 10.37KK151 pKa = 10.17EE152 pKa = 4.13SEE154 pKa = 4.13EE155 pKa = 3.85RR156 pKa = 11.84RR157 pKa = 11.84SDD159 pKa = 3.99KK160 pKa = 10.63KK161 pKa = 10.39QCPFKK166 pKa = 11.23VDD168 pKa = 3.41VTPKK172 pKa = 9.75QDD174 pKa = 3.58PKK176 pKa = 10.15ITPTPEE182 pKa = 3.98KK183 pKa = 10.08EE184 pKa = 4.35PKK186 pKa = 9.95HH187 pKa = 6.35LPTSAAGKK195 pKa = 10.21KK196 pKa = 8.11ITEE199 pKa = 4.32EE200 pKa = 3.81AAVMQGFWMDD210 pKa = 3.21GMRR213 pKa = 11.84LTEE216 pKa = 4.1KK217 pKa = 10.39TSGKK221 pKa = 9.88YY222 pKa = 10.29CLFFPQKK229 pKa = 9.69MGWSQAEE236 pKa = 4.38WISKK240 pKa = 10.46SEE242 pKa = 4.59DD243 pKa = 3.04INPRR247 pKa = 11.84TLAHH251 pKa = 7.51DD252 pKa = 3.38IFKK255 pKa = 10.62WMVSKK260 pKa = 10.77SPKK263 pKa = 8.38RR264 pKa = 11.84ATYY267 pKa = 8.97LRR269 pKa = 11.84KK270 pKa = 10.42YY271 pKa = 9.04MVEE274 pKa = 4.0EE275 pKa = 4.06

Molecular weight: 31.88 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E3P8Z2|E3P8Z2_9RHAB Putative coat protein OS=Eel virus European X OX=685443 GN=C PE=4 SV=1
MM1 pKa = 7.11EE2 pKa = 5.53RR3 pKa = 11.84KK4 pKa = 9.94NIFSIFQRR12 pKa = 11.84RR13 pKa = 11.84KK14 pKa = 6.97SQKK17 pKa = 9.56RR18 pKa = 11.84EE19 pKa = 3.43GLIRR23 pKa = 11.84NNVLSRR29 pKa = 11.84LMSPQNKK36 pKa = 6.21TQKK39 pKa = 10.49SLPHH43 pKa = 6.03LRR45 pKa = 11.84KK46 pKa = 9.68SQNICPHH53 pKa = 5.34QLPAKK58 pKa = 9.79KK59 pKa = 10.11SPKK62 pKa = 9.31KK63 pKa = 10.51QPP65 pKa = 3.17

Molecular weight: 7.71 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3596

65

2075

599.3

68.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.617 ± 0.446

1.39 ± 0.197

5.395 ± 0.329

6.618 ± 0.566

3.921 ± 0.428

5.729 ± 0.386

2.614 ± 0.311

6.062 ± 0.472

6.618 ± 0.704

9.789 ± 0.614

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.781 ± 0.378

4.533 ± 0.259

4.505 ± 0.549

4.283 ± 0.262

5.089 ± 0.469

8.788 ± 0.463

5.562 ± 0.483

5.478 ± 0.597

1.974 ± 0.17

3.254 ± 0.358
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski