Mycoplasma gallopavonis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasmopsis

Average proteome isoelectric point is 7.3

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 714 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A449B0N6|A0A449B0N6_9MOLU sn-glycerol-3-phosphate transport system permease protein ugpA OS=Mycoplasma gallopavonis OX=76629 GN=ugpA PE=3 SV=1
MM1 pKa = 7.44AASFDD6 pKa = 3.83FQHH9 pKa = 7.37FYY11 pKa = 11.07LQWKK15 pKa = 6.16LTKK18 pKa = 10.3VRR20 pKa = 11.84VDD22 pKa = 3.59NVEE25 pKa = 3.32MDD27 pKa = 3.6AFVFDD32 pKa = 3.83SFLDD36 pKa = 3.84FFEE39 pKa = 5.12FFAVDD44 pKa = 3.34YY45 pKa = 10.21TKK47 pKa = 9.7FTRR50 pKa = 11.84VGVVEE55 pKa = 4.14EE56 pKa = 4.0QVAYY60 pKa = 10.78NVDD63 pKa = 3.67LDD65 pKa = 3.95YY66 pKa = 11.75ANQIWFF72 pKa = 3.67

Molecular weight: 8.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A449AZL8|A0A449AZL8_9MOLU Phosphatidate cytidylyltransferase OS=Mycoplasma gallopavonis OX=76629 GN=cdsA PE=4 SV=1
MM1 pKa = 7.63ARR3 pKa = 11.84RR4 pKa = 11.84DD5 pKa = 3.67VLTGKK10 pKa = 10.49GPQSGNKK17 pKa = 9.15RR18 pKa = 11.84SHH20 pKa = 6.56AMNASKK26 pKa = 10.76RR27 pKa = 11.84KK28 pKa = 9.92FNVNLQKK35 pKa = 10.56VRR37 pKa = 11.84ITLNGRR43 pKa = 11.84SQTLRR48 pKa = 11.84VSAKK52 pKa = 7.55TLKK55 pKa = 9.16TLKK58 pKa = 9.91TKK60 pKa = 10.7GFII63 pKa = 3.92

Molecular weight: 7.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

714

0

714

268752

31

3575

376.4

43.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.601 ± 0.099

0.421 ± 0.022

5.318 ± 0.085

6.971 ± 0.095

5.381 ± 0.094

4.644 ± 0.102

1.468 ± 0.034

8.716 ± 0.105

9.835 ± 0.088

10.046 ± 0.107

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.652 ± 0.041

7.657 ± 0.139

2.736 ± 0.046

4.245 ± 0.077

3.19 ± 0.066

6.431 ± 0.059

5.14 ± 0.059

5.455 ± 0.084

0.983 ± 0.027

4.11 ± 0.054
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski