Salinadaptatus halalkaliphilus

Taxonomy: cellular organisms; Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales; Natrialbaceae; Salinadaptatus

Average proteome isoelectric point is 4.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4165 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4S3TK88|A0A4S3TK88_9EURY Site-specific integrase OS=Salinadaptatus halalkaliphilus OX=2419781 GN=D8Y22_12840 PE=4 SV=1
MM1 pKa = 7.81TDD3 pKa = 3.3TPRR6 pKa = 11.84LRR8 pKa = 11.84SRR10 pKa = 11.84RR11 pKa = 11.84TLLASTGSLAALGIAGCLGDD31 pKa = 4.45EE32 pKa = 4.39NGGDD36 pKa = 4.53SEE38 pKa = 6.32DD39 pKa = 4.62GDD41 pKa = 5.26HH42 pKa = 7.98DD43 pKa = 5.17DD44 pKa = 5.93HH45 pKa = 9.39DD46 pKa = 6.79DD47 pKa = 5.46DD48 pKa = 7.48DD49 pKa = 6.37DD50 pKa = 5.47DD51 pKa = 6.86HH52 pKa = 8.99DD53 pKa = 5.77DD54 pKa = 3.81DD55 pKa = 6.41HH56 pKa = 9.11DD57 pKa = 6.26GDD59 pKa = 3.84VHH61 pKa = 8.4DD62 pKa = 5.84EE63 pKa = 3.93IGISEE68 pKa = 4.12FEE70 pKa = 4.01ILDD73 pKa = 3.8RR74 pKa = 11.84DD75 pKa = 3.55LDD77 pKa = 4.02EE78 pKa = 5.58AVIAYY83 pKa = 7.86VHH85 pKa = 6.69GDD87 pKa = 3.2HH88 pKa = 7.29WDD90 pKa = 3.6HH91 pKa = 6.95GPLEE95 pKa = 4.57VPHH98 pKa = 6.93GDD100 pKa = 3.68YY101 pKa = 11.19VSVGAYY107 pKa = 10.22VEE109 pKa = 5.65DD110 pKa = 5.19DD111 pKa = 4.68DD112 pKa = 6.07GDD114 pKa = 4.08EE115 pKa = 4.24VALGDD120 pKa = 4.93DD121 pKa = 3.76IEE123 pKa = 4.62LAIEE127 pKa = 4.25PADD130 pKa = 3.83DD131 pKa = 3.75AVSVDD136 pKa = 3.13GHH138 pKa = 6.51GDD140 pKa = 3.24HH141 pKa = 5.93VHH143 pKa = 6.31VYY145 pKa = 10.46GEE147 pKa = 4.04EE148 pKa = 3.88AGFTEE153 pKa = 5.16VVVQLVDD160 pKa = 3.39SGDD163 pKa = 3.52VVYY166 pKa = 10.3EE167 pKa = 4.13SPEE170 pKa = 4.12LEE172 pKa = 4.45VAVDD176 pKa = 5.3DD177 pKa = 5.11YY178 pKa = 12.21DD179 pKa = 6.13HH180 pKa = 7.85DD181 pKa = 4.14DD182 pKa = 3.89HH183 pKa = 8.01GHH185 pKa = 6.06GEE187 pKa = 4.02VDD189 pKa = 3.27EE190 pKa = 4.95LKK192 pKa = 10.61IIDD195 pKa = 3.98RR196 pKa = 11.84SEE198 pKa = 4.29DD199 pKa = 3.2PHH201 pKa = 8.4EE202 pKa = 4.55EE203 pKa = 3.67VAEE206 pKa = 4.02YY207 pKa = 10.7HH208 pKa = 6.76DD209 pKa = 4.1GHH211 pKa = 6.94WDD213 pKa = 3.39GEE215 pKa = 4.41LPHH218 pKa = 6.88VHH220 pKa = 6.32VDD222 pKa = 3.72DD223 pKa = 5.52NISLGAEE230 pKa = 4.01FLDD233 pKa = 4.12DD234 pKa = 5.06HH235 pKa = 7.88GDD237 pKa = 3.83EE238 pKa = 4.55IPIGGNEE245 pKa = 4.07EE246 pKa = 4.07YY247 pKa = 10.71EE248 pKa = 4.31LAVTLADD255 pKa = 4.01DD256 pKa = 4.33AEE258 pKa = 5.39DD259 pKa = 4.97GIVAIDD265 pKa = 4.72PDD267 pKa = 4.28EE268 pKa = 4.63HH269 pKa = 5.39WHH271 pKa = 6.48GDD273 pKa = 3.16HH274 pKa = 5.43VHH276 pKa = 6.98IYY278 pKa = 10.95GEE280 pKa = 4.6DD281 pKa = 3.57EE282 pKa = 4.45SEE284 pKa = 4.28TEE286 pKa = 4.32VVFKK290 pKa = 10.7LWHH293 pKa = 7.23DD294 pKa = 4.15DD295 pKa = 3.56HH296 pKa = 8.44ADD298 pKa = 3.47WEE300 pKa = 4.59SAPIAVEE307 pKa = 4.29VEE309 pKa = 4.15DD310 pKa = 4.27HH311 pKa = 6.61

Molecular weight: 34.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4S3TH69|A0A4S3TH69_9EURY Uncharacterized protein OS=Salinadaptatus halalkaliphilus OX=2419781 GN=D8Y22_18565 PE=4 SV=1
MM1 pKa = 7.35LPKK4 pKa = 9.82RR5 pKa = 11.84TVRR8 pKa = 11.84CAVTRR13 pKa = 11.84LKK15 pKa = 10.83EE16 pKa = 3.94SGLIEE21 pKa = 4.06GRR23 pKa = 11.84VSFRR27 pKa = 11.84DD28 pKa = 3.45ARR30 pKa = 11.84QSVYY34 pKa = 11.32SLTEE38 pKa = 3.87DD39 pKa = 3.59GKK41 pKa = 10.53RR42 pKa = 11.84VRR44 pKa = 11.84TLPVEE49 pKa = 4.18KK50 pKa = 10.66

Molecular weight: 5.73 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4165

0

4165

1243612

42

2865

298.6

32.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.439 ± 0.046

0.759 ± 0.011

8.733 ± 0.057

8.844 ± 0.058

3.2 ± 0.028

8.146 ± 0.038

2.04 ± 0.017

4.653 ± 0.031

1.7 ± 0.021

8.952 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.701 ± 0.019

2.292 ± 0.021

4.62 ± 0.026

2.673 ± 0.024

6.293 ± 0.038

5.603 ± 0.029

6.795 ± 0.033

8.72 ± 0.04

1.112 ± 0.013

2.724 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski