Maracuja mosaic virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0SEL4|A0SEL4_9VIRU Capsid protein OS=Maracuja mosaic virus OX=368736 GN=CP PE=3 SV=1
MM1 pKa = 8.18PYY3 pKa = 10.35QPITIKK9 pKa = 10.39QLPWVSANWADD20 pKa = 3.71YY21 pKa = 8.03QTLVNVLRR29 pKa = 11.84NTSATSFQTQAGRR42 pKa = 11.84DD43 pKa = 3.85SIRR46 pKa = 11.84SQLTGCVDD54 pKa = 3.25SAVQVNVRR62 pKa = 11.84FPEE65 pKa = 4.12RR66 pKa = 11.84FLVFINDD73 pKa = 3.72PAIADD78 pKa = 3.36VWFALLKK85 pKa = 10.37ATDD88 pKa = 3.56TKK90 pKa = 11.41NRR92 pKa = 11.84IIEE95 pKa = 4.11VDD97 pKa = 3.66TEE99 pKa = 4.18RR100 pKa = 11.84SPSNSEE106 pKa = 3.59IEE108 pKa = 4.49SVTRR112 pKa = 11.84RR113 pKa = 11.84VDD115 pKa = 3.43DD116 pKa = 4.03ASVAIRR122 pKa = 11.84INVEE126 pKa = 3.87RR127 pKa = 11.84LLKK130 pKa = 10.61ALNDD134 pKa = 3.55VQGVYY139 pKa = 10.86DD140 pKa = 3.57RR141 pKa = 11.84TLFEE145 pKa = 4.28QVSGLTWVEE154 pKa = 3.73AGQVASASKK163 pKa = 10.73

Molecular weight: 18.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0SEL4|A0SEL4_9VIRU Capsid protein OS=Maracuja mosaic virus OX=368736 GN=CP PE=3 SV=1
MM1 pKa = 7.74SLRR4 pKa = 11.84AQNAQDD10 pKa = 3.65VVPPLDD16 pKa = 3.58YY17 pKa = 11.12LNPSNFVKK25 pKa = 10.53PKK27 pKa = 10.45LVGLEE32 pKa = 3.7RR33 pKa = 11.84LGLVKK38 pKa = 9.91TPKK41 pKa = 10.31KK42 pKa = 9.55MCALMEE48 pKa = 4.21TDD50 pKa = 3.77VVKK53 pKa = 10.76ISPKK57 pKa = 9.7EE58 pKa = 3.71RR59 pKa = 11.84TVFPLNLVEE68 pKa = 4.92KK69 pKa = 10.29IKK71 pKa = 10.94DD72 pKa = 3.26IANYY76 pKa = 10.13KK77 pKa = 10.73YY78 pKa = 10.5MMLLACVISGRR89 pKa = 11.84WHH91 pKa = 5.84VPNTVKK97 pKa = 11.14GEE99 pKa = 4.18VFLSLMDD106 pKa = 4.22KK107 pKa = 10.69RR108 pKa = 11.84LTDD111 pKa = 3.46EE112 pKa = 4.55RR113 pKa = 11.84EE114 pKa = 4.17ATILTANANPSVSEE128 pKa = 3.81FQIRR132 pKa = 11.84IHH134 pKa = 6.71PNYY137 pKa = 11.1SMVASDD143 pKa = 5.78AIQEE147 pKa = 4.06PLEE150 pKa = 4.26LFVHH154 pKa = 5.81VKK156 pKa = 8.93GLRR159 pKa = 11.84MAQGFSPLSLEE170 pKa = 3.7IAFCVVCCDD179 pKa = 3.62VVIVKK184 pKa = 9.47SLKK187 pKa = 9.94MKK189 pKa = 10.37ILQNQDD195 pKa = 2.45KK196 pKa = 10.11FGNAEE201 pKa = 4.04GEE203 pKa = 4.43VGSEE207 pKa = 4.21GLDD210 pKa = 3.39DD211 pKa = 5.18LLRR214 pKa = 11.84GSNMPSIRR222 pKa = 11.84ASAVGSRR229 pKa = 11.84KK230 pKa = 9.64RR231 pKa = 11.84LNANPKK237 pKa = 9.92RR238 pKa = 11.84VFSGSKK244 pKa = 9.32GNSWSEE250 pKa = 3.56KK251 pKa = 8.36GNYY254 pKa = 9.0VGVRR258 pKa = 11.84KK259 pKa = 10.2KK260 pKa = 10.76KK261 pKa = 10.52GVVEE265 pKa = 4.26SDD267 pKa = 3.2MLTSDD272 pKa = 4.58AEE274 pKa = 4.63STVSNYY280 pKa = 9.18STDD283 pKa = 3.05VSNALPTNNDD293 pKa = 2.83QAVTMGVRR301 pKa = 11.84QLGGLPNTGG310 pKa = 3.05

Molecular weight: 33.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

2056

163

1103

514.0

58.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.815 ± 1.064

1.946 ± 0.359

6.08 ± 0.387

5.837 ± 0.447

5.156 ± 0.725

5.204 ± 0.578

1.556 ± 0.367

5.253 ± 0.6

6.274 ± 0.759

8.998 ± 0.563

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.189 ± 0.542

5.107 ± 0.598

4.377 ± 0.247

3.745 ± 0.518

5.691 ± 0.514

7.539 ± 0.409

6.518 ± 0.99

9.29 ± 1.001

1.167 ± 0.279

3.259 ± 0.517
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski