Amino acid dipepetide frequency for Fusarium poae fusarivirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.045AlaAla: 5.045 ± 2.691
0.0AlaCys: 0.0 ± 0.0
6.054AlaAsp: 6.054 ± 0.089
7.568AlaGlu: 7.568 ± 5.606
5.045AlaPhe: 5.045 ± 0.449
3.532AlaGly: 3.532 ± 1.36
3.027AlaHis: 3.027 ± 0.479
2.018AlaIle: 2.018 ± 1.017
5.55AlaLys: 5.55 ± 5.577
7.568AlaLeu: 7.568 ± 1.419
0.505AlaMet: 0.505 ± 0.254
2.523AlaAsn: 2.523 ± 1.869
3.532AlaPro: 3.532 ± 0.313
4.541AlaGln: 4.541 ± 1.898
6.054AlaArg: 6.054 ± 0.958
5.55AlaSer: 5.55 ± 0.343
4.541AlaThr: 4.541 ± 0.195
4.036AlaVal: 4.036 ± 0.988
1.514AlaTrp: 1.514 ± 0.763
3.027AlaTyr: 3.027 ± 0.568
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
0.0CysAsp: 0.0 ± 0.0
0.0CysGlu: 0.0 ± 0.0
0.505CysPhe: 0.505 ± 0.254
0.0CysGly: 0.0 ± 0.0
0.505CysHis: 0.505 ± 0.254
1.009CysIle: 1.009 ± 0.509
0.505CysLys: 0.505 ± 0.254
0.505CysLeu: 0.505 ± 0.792
0.0CysMet: 0.0 ± 0.0
0.0CysAsn: 0.0 ± 0.0
1.009CysPro: 1.009 ± 0.509
0.505CysGln: 0.505 ± 0.254
0.0CysArg: 0.0 ± 0.0
0.0CysSer: 0.0 ± 0.0
0.0CysThr: 0.0 ± 0.0
0.505CysVal: 0.505 ± 0.254
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.523AspAla: 2.523 ± 1.869
0.0AspCys: 0.0 ± 0.0
2.523AspAsp: 2.523 ± 0.225
2.523AspGlu: 2.523 ± 0.822
3.532AspPhe: 3.532 ± 0.733
2.018AspGly: 2.018 ± 2.123
1.514AspHis: 1.514 ± 0.763
5.045AspIle: 5.045 ± 2.543
3.532AspLys: 3.532 ± 2.407
5.045AspLeu: 5.045 ± 2.691
0.505AspMet: 0.505 ± 0.421
3.027AspAsn: 3.027 ± 0.568
4.541AspPro: 4.541 ± 0.195
1.514AspGln: 1.514 ± 0.284
2.523AspArg: 2.523 ± 1.869
3.027AspSer: 3.027 ± 1.526
2.523AspThr: 2.523 ± 0.822
5.045AspVal: 5.045 ± 2.543
1.514AspTrp: 1.514 ± 0.763
1.009AspTyr: 1.009 ± 0.538
0.0AspXaa: 0.0 ± 0.0
Glu
7.064GluAla: 7.064 ± 1.674
1.009GluCys: 1.009 ± 0.538
1.514GluAsp: 1.514 ± 0.284
2.018GluGlu: 2.018 ± 0.03
2.018GluPhe: 2.018 ± 1.076
1.009GluGly: 1.009 ± 0.538
1.514GluHis: 1.514 ± 0.763
2.523GluIle: 2.523 ± 1.869
5.045GluLys: 5.045 ± 3.737
8.577GluLeu: 8.577 ± 0.136
2.523GluMet: 2.523 ± 0.822
3.027GluAsn: 3.027 ± 0.568
1.009GluPro: 1.009 ± 0.509
0.505GluGln: 0.505 ± 0.792
1.514GluArg: 1.514 ± 0.763
2.523GluSer: 2.523 ± 1.869
1.514GluThr: 1.514 ± 1.331
4.036GluVal: 4.036 ± 1.106
0.0GluTrp: 0.0 ± 0.0
1.009GluTyr: 1.009 ± 0.509
0.0GluXaa: 0.0 ± 0.0
Phe
3.532PheAla: 3.532 ± 0.313
0.505PheCys: 0.505 ± 0.254
2.523PheAsp: 2.523 ± 1.271
1.009PheGlu: 1.009 ± 0.509
1.009PhePhe: 1.009 ± 0.538
4.036PheGly: 4.036 ± 0.988
0.0PheHis: 0.0 ± 0.0
2.018PheIle: 2.018 ± 0.03
5.55PheLys: 5.55 ± 2.436
4.036PheLeu: 4.036 ± 2.034
1.009PheMet: 1.009 ± 0.509
2.523PheAsn: 2.523 ± 1.271
2.523PhePro: 2.523 ± 0.822
1.514PheGln: 1.514 ± 0.284
2.018PheArg: 2.018 ± 1.017
8.073PheSer: 8.073 ± 0.118
3.027PheThr: 3.027 ± 0.479
3.027PheVal: 3.027 ± 1.526
2.018PheTrp: 2.018 ± 0.03
1.514PheTyr: 1.514 ± 0.284
0.0PheXaa: 0.0 ± 0.0
Gly
2.523GlyAla: 2.523 ± 0.822
0.505GlyCys: 0.505 ± 0.254
2.523GlyAsp: 2.523 ± 0.225
3.027GlyGlu: 3.027 ± 1.526
3.532GlyPhe: 3.532 ± 0.733
1.009GlyGly: 1.009 ± 0.509
0.505GlyHis: 0.505 ± 0.254
2.523GlyIle: 2.523 ± 0.225
5.55GlyLys: 5.55 ± 0.343
6.054GlyLeu: 6.054 ± 2.005
1.514GlyMet: 1.514 ± 0.763
0.505GlyAsn: 0.505 ± 0.792
2.018GlyPro: 2.018 ± 1.017
1.009GlyGln: 1.009 ± 0.509
1.009GlyArg: 1.009 ± 0.509
7.568GlySer: 7.568 ± 1.721
2.018GlyThr: 2.018 ± 1.076
6.054GlyVal: 6.054 ± 0.958
2.018GlyTrp: 2.018 ± 0.03
2.523GlyTyr: 2.523 ± 0.822
0.0GlyXaa: 0.0 ± 0.0
His
1.514HisAla: 1.514 ± 0.763
0.0HisCys: 0.0 ± 0.0
1.514HisAsp: 1.514 ± 0.763
0.505HisGlu: 0.505 ± 0.792
0.505HisPhe: 0.505 ± 0.254
1.009HisGly: 1.009 ± 0.509
0.505HisHis: 0.505 ± 0.254
2.523HisIle: 2.523 ± 0.225
2.523HisLys: 2.523 ± 0.225
2.523HisLeu: 2.523 ± 1.271
1.009HisMet: 1.009 ± 0.538
0.505HisAsn: 0.505 ± 0.254
0.0HisPro: 0.0 ± 0.0
1.514HisGln: 1.514 ± 0.763
1.009HisArg: 1.009 ± 0.538
1.514HisSer: 1.514 ± 0.763
1.514HisThr: 1.514 ± 0.284
1.009HisVal: 1.009 ± 0.538
0.0HisTrp: 0.0 ± 0.0
0.505HisTyr: 0.505 ± 0.254
0.0HisXaa: 0.0 ± 0.0
Ile
2.523IleAla: 2.523 ± 0.225
0.505IleCys: 0.505 ± 0.254
4.036IleAsp: 4.036 ± 0.059
1.514IleGlu: 1.514 ± 0.763
3.532IlePhe: 3.532 ± 0.733
4.036IleGly: 4.036 ± 0.988
0.505IleHis: 0.505 ± 0.254
3.532IleIle: 3.532 ± 1.78
3.027IleLys: 3.027 ± 0.568
4.541IleLeu: 4.541 ± 1.242
0.0IleMet: 0.0 ± 0.0
2.523IleAsn: 2.523 ± 0.822
2.523IlePro: 2.523 ± 0.225
1.009IleGln: 1.009 ± 0.538
2.018IleArg: 2.018 ± 0.03
3.532IleSer: 3.532 ± 0.733
1.009IleThr: 1.009 ± 0.509
5.045IleVal: 5.045 ± 2.543
0.505IleTrp: 0.505 ± 0.254
0.505IleTyr: 0.505 ± 0.254
0.0IleXaa: 0.0 ± 0.0
Lys
7.568LysAla: 7.568 ± 3.513
0.0LysCys: 0.0 ± 0.0
3.027LysAsp: 3.027 ± 0.568
4.036LysGlu: 4.036 ± 3.199
4.541LysPhe: 4.541 ± 0.852
5.55LysGly: 5.55 ± 1.39
1.514LysHis: 1.514 ± 0.284
2.018LysIle: 2.018 ± 0.03
2.018LysLys: 2.018 ± 0.03
5.55LysLeu: 5.55 ± 0.704
0.505LysMet: 0.505 ± 0.434
1.009LysAsn: 1.009 ± 0.538
0.505LysPro: 0.505 ± 0.792
2.523LysGln: 2.523 ± 1.869
3.027LysArg: 3.027 ± 1.614
4.541LysSer: 4.541 ± 3.992
4.541LysThr: 4.541 ± 2.945
6.559LysVal: 6.559 ± 0.881
1.514LysTrp: 1.514 ± 0.763
1.009LysTyr: 1.009 ± 0.509
0.0LysXaa: 0.0 ± 0.0
Leu
10.595LeuAla: 10.595 ± 1.987
0.0LeuCys: 0.0 ± 0.0
7.064LeuAsp: 7.064 ± 0.627
6.559LeuGlu: 6.559 ± 0.881
4.541LeuPhe: 4.541 ± 1.898
6.054LeuGly: 6.054 ± 2.005
2.018LeuHis: 2.018 ± 1.076
5.045LeuIle: 5.045 ± 2.543
5.045LeuLys: 5.045 ± 2.691
13.118LeuLeu: 13.118 ± 1.378
3.027LeuMet: 3.027 ± 0.479
3.532LeuAsn: 3.532 ± 0.733
7.568LeuPro: 7.568 ± 2.768
3.027LeuGln: 3.027 ± 0.568
6.054LeuArg: 6.054 ± 0.089
14.632LeuSer: 14.632 ± 0.999
3.532LeuThr: 3.532 ± 0.733
6.559LeuVal: 6.559 ± 2.259
4.036LeuTrp: 4.036 ± 0.988
1.514LeuTyr: 1.514 ± 0.763
0.0LeuXaa: 0.0 ± 0.0
Met
2.018MetAla: 2.018 ± 1.017
0.505MetCys: 0.505 ± 0.254
3.027MetAsp: 3.027 ± 0.568
1.514MetGlu: 1.514 ± 1.331
0.0MetPhe: 0.0 ± 0.0
1.514MetGly: 1.514 ± 0.763
0.505MetHis: 0.505 ± 0.254
1.009MetIle: 1.009 ± 0.538
2.018MetLys: 2.018 ± 1.076
2.523MetLeu: 2.523 ± 0.225
0.0MetMet: 0.0 ± 0.0
1.009MetAsn: 1.009 ± 0.509
0.505MetPro: 0.505 ± 0.254
1.009MetGln: 1.009 ± 0.509
1.009MetArg: 1.009 ± 0.538
1.009MetSer: 1.009 ± 0.538
1.514MetThr: 1.514 ± 0.284
1.514MetVal: 1.514 ± 0.763
0.0MetTrp: 0.0 ± 0.0
0.505MetTyr: 0.505 ± 0.254
0.0MetXaa: 0.0 ± 0.0
Asn
5.045AsnAla: 5.045 ± 1.644
0.0AsnCys: 0.0 ± 0.0
0.0AsnAsp: 0.0 ± 0.0
1.514AsnGlu: 1.514 ± 0.284
6.054AsnPhe: 6.054 ± 3.051
1.514AsnGly: 1.514 ± 0.763
1.514AsnHis: 1.514 ± 0.763
2.018AsnIle: 2.018 ± 0.03
1.514AsnLys: 1.514 ± 0.284
1.514AsnLeu: 1.514 ± 0.284
0.505AsnMet: 0.505 ± 0.792
1.514AsnAsn: 1.514 ± 0.284
2.018AsnPro: 2.018 ± 0.03
0.505AsnGln: 0.505 ± 0.254
0.505AsnArg: 0.505 ± 0.254
2.523AsnSer: 2.523 ± 0.822
1.514AsnThr: 1.514 ± 0.763
3.027AsnVal: 3.027 ± 1.614
0.505AsnTrp: 0.505 ± 0.254
1.514AsnTyr: 1.514 ± 0.763
0.0AsnXaa: 0.0 ± 0.0
Pro
2.018ProAla: 2.018 ± 1.076
0.505ProCys: 0.505 ± 0.254
4.541ProAsp: 4.541 ± 0.852
1.514ProGlu: 1.514 ± 0.284
2.018ProPhe: 2.018 ± 1.017
1.009ProGly: 1.009 ± 0.538
0.505ProHis: 0.505 ± 0.254
1.514ProIle: 1.514 ± 0.763
1.514ProLys: 1.514 ± 0.284
5.55ProLeu: 5.55 ± 1.75
0.0ProMet: 0.0 ± 0.0
3.027ProAsn: 3.027 ± 1.526
3.532ProPro: 3.532 ± 2.407
1.514ProGln: 1.514 ± 0.284
1.514ProArg: 1.514 ± 0.763
6.054ProSer: 6.054 ± 0.958
3.532ProThr: 3.532 ± 0.733
4.036ProVal: 4.036 ± 0.059
1.009ProTrp: 1.009 ± 0.509
1.009ProTyr: 1.009 ± 0.509
0.0ProXaa: 0.0 ± 0.0
Gln
3.532GlnAla: 3.532 ± 1.36
0.0GlnCys: 0.0 ± 0.0
2.018GlnAsp: 2.018 ± 1.076
2.523GlnGlu: 2.523 ± 0.822
1.009GlnPhe: 1.009 ± 0.509
1.009GlnGly: 1.009 ± 0.509
1.009GlnHis: 1.009 ± 1.585
1.009GlnIle: 1.009 ± 0.538
0.505GlnLys: 0.505 ± 0.792
6.054GlnLeu: 6.054 ± 0.089
2.018GlnMet: 2.018 ± 1.076
0.505GlnAsn: 0.505 ± 0.792
0.505GlnPro: 0.505 ± 0.254
1.514GlnGln: 1.514 ± 0.284
2.523GlnArg: 2.523 ± 1.271
1.514GlnSer: 1.514 ± 1.331
0.505GlnThr: 0.505 ± 0.254
4.036GlnVal: 4.036 ± 1.106
0.0GlnTrp: 0.0 ± 0.0
0.505GlnTyr: 0.505 ± 0.254
0.0GlnXaa: 0.0 ± 0.0
Arg
5.045ArgAla: 5.045 ± 2.691
0.505ArgCys: 0.505 ± 0.254
1.009ArgAsp: 1.009 ± 0.509
2.523ArgGlu: 2.523 ± 1.271
1.514ArgPhe: 1.514 ± 0.763
2.018ArgGly: 2.018 ± 1.017
1.514ArgHis: 1.514 ± 0.763
1.514ArgIle: 1.514 ± 0.763
3.532ArgLys: 3.532 ± 0.733
5.045ArgLeu: 5.045 ± 1.644
1.514ArgMet: 1.514 ± 0.284
1.009ArgAsn: 1.009 ± 0.509
1.514ArgPro: 1.514 ± 0.763
2.523ArgGln: 2.523 ± 0.225
3.027ArgArg: 3.027 ± 0.479
6.559ArgSer: 6.559 ± 0.881
2.523ArgThr: 2.523 ± 1.271
3.532ArgVal: 3.532 ± 0.733
1.009ArgTrp: 1.009 ± 0.509
1.514ArgTyr: 1.514 ± 0.763
0.0ArgXaa: 0.0 ± 0.0
Ser
6.054SerAla: 6.054 ± 0.089
0.505SerCys: 0.505 ± 0.254
3.532SerAsp: 3.532 ± 1.36
4.036SerGlu: 4.036 ± 2.153
4.541SerPhe: 4.541 ± 1.242
8.577SerGly: 8.577 ± 2.229
2.523SerHis: 2.523 ± 0.225
3.532SerIle: 3.532 ± 0.313
4.541SerLys: 4.541 ± 0.195
15.641SerLeu: 15.641 ± 1.538
1.514SerMet: 1.514 ± 0.284
3.027SerAsn: 3.027 ± 0.479
3.532SerPro: 3.532 ± 0.733
2.523SerGln: 2.523 ± 1.869
4.036SerArg: 4.036 ± 0.988
12.614SerSer: 12.614 ± 6.357
7.064SerThr: 7.064 ± 0.627
6.559SerVal: 6.559 ± 1.212
2.523SerTrp: 2.523 ± 0.822
2.523SerTyr: 2.523 ± 1.271
0.0SerXaa: 0.0 ± 0.0
Thr
4.036ThrAla: 4.036 ± 2.034
0.0ThrCys: 0.0 ± 0.0
1.514ThrAsp: 1.514 ± 1.331
1.009ThrGlu: 1.009 ± 0.538
2.523ThrPhe: 2.523 ± 1.869
5.045ThrGly: 5.045 ± 2.543
1.009ThrHis: 1.009 ± 0.509
2.018ThrIle: 2.018 ± 1.017
3.027ThrLys: 3.027 ± 2.661
5.045ThrLeu: 5.045 ± 1.644
1.009ThrMet: 1.009 ± 0.509
2.018ThrAsn: 2.018 ± 1.017
2.523ThrPro: 2.523 ± 0.225
2.523ThrGln: 2.523 ± 0.822
0.0ThrArg: 0.0 ± 0.0
5.55ThrSer: 5.55 ± 0.343
3.532ThrThr: 3.532 ± 2.407
5.045ThrVal: 5.045 ± 0.597
0.0ThrTrp: 0.0 ± 0.0
0.505ThrTyr: 0.505 ± 0.792
0.0ThrXaa: 0.0 ± 0.0
Val
7.064ValAla: 7.064 ± 0.627
0.505ValCys: 0.505 ± 0.254
5.55ValAsp: 5.55 ± 0.343
4.036ValGlu: 4.036 ± 0.059
2.523ValPhe: 2.523 ± 0.225
3.027ValGly: 3.027 ± 0.568
0.505ValHis: 0.505 ± 0.254
3.532ValIle: 3.532 ± 0.313
5.55ValLys: 5.55 ± 0.343
7.064ValLeu: 7.064 ± 2.513
4.036ValMet: 4.036 ± 0.988
1.514ValAsn: 1.514 ± 0.763
4.036ValPro: 4.036 ± 0.059
1.514ValGln: 1.514 ± 1.331
6.559ValArg: 6.559 ± 2.259
8.577ValSer: 8.577 ± 3.276
1.514ValThr: 1.514 ± 0.284
5.55ValVal: 5.55 ± 1.75
3.027ValTrp: 3.027 ± 1.526
3.027ValTyr: 3.027 ± 1.526
0.0ValXaa: 0.0 ± 0.0
Trp
1.009TrpAla: 1.009 ± 1.585
0.0TrpCys: 0.0 ± 0.0
0.505TrpAsp: 0.505 ± 0.792
0.505TrpGlu: 0.505 ± 0.254
2.018TrpPhe: 2.018 ± 1.017
1.514TrpGly: 1.514 ± 0.763
0.505TrpHis: 0.505 ± 0.254
1.009TrpIle: 1.009 ± 0.509
0.505TrpLys: 0.505 ± 0.254
3.532TrpLeu: 3.532 ± 0.733
0.0TrpMet: 0.0 ± 0.0
1.009TrpAsn: 1.009 ± 0.509
1.009TrpPro: 1.009 ± 0.509
1.009TrpGln: 1.009 ± 0.509
1.514TrpArg: 1.514 ± 0.284
2.018TrpSer: 2.018 ± 1.017
0.0TrpThr: 0.0 ± 0.0
1.514TrpVal: 1.514 ± 0.763
1.009TrpTrp: 1.009 ± 0.538
2.523TrpTyr: 2.523 ± 1.271
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.523TyrAla: 2.523 ± 1.271
0.0TyrCys: 0.0 ± 0.0
1.514TyrAsp: 1.514 ± 0.763
2.018TyrGlu: 2.018 ± 1.076
0.505TyrPhe: 0.505 ± 0.254
0.505TyrGly: 0.505 ± 0.254
0.505TyrHis: 0.505 ± 0.254
1.009TyrIle: 1.009 ± 0.509
0.505TyrLys: 0.505 ± 0.254
4.036TyrLeu: 4.036 ± 0.059
1.009TyrMet: 1.009 ± 0.509
1.009TyrAsn: 1.009 ± 0.538
1.514TyrPro: 1.514 ± 0.284
0.0TyrGln: 0.0 ± 0.0
3.027TyrArg: 3.027 ± 1.526
2.018TyrSer: 2.018 ± 1.017
2.018TyrThr: 2.018 ± 0.03
2.018TyrVal: 2.018 ± 1.017
0.505TyrTrp: 0.505 ± 0.254
2.018TyrTyr: 2.018 ± 0.03
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (1983 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski