Camelimonas lactis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Chelatococcaceae; Camelimonas

Average proteome isoelectric point is 6.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3613 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4R2GJR6|A0A4R2GJR6_9RHIZ Rhomboid family protein OS=Camelimonas lactis OX=659006 GN=EV666_1194 PE=4 SV=1
MM1 pKa = 8.12AIPDD5 pKa = 3.62HH6 pKa = 6.79ARR8 pKa = 11.84TNFNTLLRR16 pKa = 11.84AAGDD20 pKa = 3.71GNLALMEE27 pKa = 4.67CLDD30 pKa = 3.76AVTCEE35 pKa = 3.67RR36 pKa = 11.84RR37 pKa = 11.84YY38 pKa = 9.73VVCAVGRR45 pKa = 11.84ADD47 pKa = 5.32DD48 pKa = 4.37GDD50 pKa = 3.6IVMTPFGHH58 pKa = 7.34LADD61 pKa = 4.46GNPYY65 pKa = 10.74DD66 pKa = 5.49LYY68 pKa = 11.19LPPDD72 pKa = 4.56PDD74 pKa = 4.15DD75 pKa = 3.76PAGFIEE81 pKa = 4.07NPEE84 pKa = 4.45DD85 pKa = 3.82GGASS89 pKa = 3.32

Molecular weight: 9.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4R2GT76|A0A4R2GT76_9RHIZ Uncharacterized protein OS=Camelimonas lactis OX=659006 GN=EV666_10537 PE=4 SV=1
MM1 pKa = 7.35VFLLKK6 pKa = 9.86PQKK9 pKa = 10.39AAARR13 pKa = 11.84KK14 pKa = 7.67PAARR18 pKa = 11.84SSAASRR24 pKa = 11.84TTTRR28 pKa = 11.84AAPKK32 pKa = 10.16KK33 pKa = 8.66PAARR37 pKa = 11.84KK38 pKa = 8.06ATATKK43 pKa = 10.48APARR47 pKa = 11.84KK48 pKa = 7.52TATTKK53 pKa = 9.58TAAAKK58 pKa = 9.29TRR60 pKa = 11.84ATAARR65 pKa = 11.84APARR69 pKa = 11.84KK70 pKa = 8.38PAARR74 pKa = 11.84TTTTRR79 pKa = 11.84ATAAKK84 pKa = 9.51KK85 pKa = 9.17PAVRR89 pKa = 11.84KK90 pKa = 8.93AAARR94 pKa = 11.84PAHH97 pKa = 6.93RR98 pKa = 11.84GRR100 pKa = 4.37

Molecular weight: 10.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3613

0

3613

1159828

26

2966

321.0

34.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.095 ± 0.064

0.811 ± 0.013

5.691 ± 0.032

5.103 ± 0.036

3.51 ± 0.027

9.129 ± 0.049

1.939 ± 0.016

4.665 ± 0.026

2.828 ± 0.029

9.781 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.486 ± 0.019

2.513 ± 0.033

5.572 ± 0.038

3.186 ± 0.023

7.757 ± 0.046

5.052 ± 0.033

4.991 ± 0.03

7.454 ± 0.033

1.373 ± 0.016

2.066 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski