Corynespora cassiicola Philippines

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Pleosporomycetidae; Pleosporales; Corynesporascaceae; Corynespora; Corynespora cassiicola

Average proteome isoelectric point is 6.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 17125 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2T2N800|A0A2T2N800_CORCC Short chain dehydrogenase OS=Corynespora cassiicola Philippines OX=1448308 GN=BS50DRAFT_651787 PE=4 SV=1
MM1 pKa = 7.57GGFSRR6 pKa = 11.84ISALLLAAGYY16 pKa = 10.04LGSEE20 pKa = 4.44VAAAAVPAVPVPSAPQTDD38 pKa = 3.68RR39 pKa = 11.84VLRR42 pKa = 11.84AATRR46 pKa = 11.84RR47 pKa = 11.84SNLHH51 pKa = 5.55RR52 pKa = 11.84RR53 pKa = 11.84GLRR56 pKa = 11.84IEE58 pKa = 4.24KK59 pKa = 10.52KK60 pKa = 10.19FGSEE64 pKa = 3.23LAYY67 pKa = 9.86IEE69 pKa = 4.68EE70 pKa = 4.49EE71 pKa = 4.1NGLSGRR77 pKa = 11.84PVFASHH83 pKa = 5.28VTVGSKK89 pKa = 10.54KK90 pKa = 10.24PILNLEE96 pKa = 4.3EE97 pKa = 5.25IEE99 pKa = 6.45DD100 pKa = 3.8YY101 pKa = 11.21LQDD104 pKa = 3.79VKK106 pKa = 11.13CGSDD110 pKa = 3.04GKK112 pKa = 10.3MKK114 pKa = 10.74LVFKK118 pKa = 10.78DD119 pKa = 4.43RR120 pKa = 11.84IAARR124 pKa = 11.84DD125 pKa = 3.56ARR127 pKa = 11.84LACSDD132 pKa = 3.92EE133 pKa = 4.64DD134 pKa = 3.62GGLIITSHH142 pKa = 6.47EE143 pKa = 4.13GCNVDD148 pKa = 3.97GEE150 pKa = 4.34RR151 pKa = 11.84SVYY154 pKa = 9.44SVKK157 pKa = 10.74DD158 pKa = 2.96IAFADD163 pKa = 3.97DD164 pKa = 3.91EE165 pKa = 4.63NALEE169 pKa = 4.03LAVAEE174 pKa = 4.8KK175 pKa = 8.96MWKK178 pKa = 10.12DD179 pKa = 3.36AFDD182 pKa = 4.02HH183 pKa = 6.5FDD185 pKa = 2.87ISFGHH190 pKa = 5.54TTDD193 pKa = 2.96KK194 pKa = 10.7FHH196 pKa = 6.83YY197 pKa = 7.51RR198 pKa = 11.84THH200 pKa = 7.13RR201 pKa = 11.84DD202 pKa = 3.16FARR205 pKa = 11.84RR206 pKa = 11.84KK207 pKa = 8.07RR208 pKa = 11.84QEE210 pKa = 3.82AGEE213 pKa = 4.12PDD215 pKa = 3.59ITPQPVEE222 pKa = 4.47IPTDD226 pKa = 3.31IPDD229 pKa = 4.08DD230 pKa = 4.23VNSVEE235 pKa = 6.32FDD237 pKa = 3.79LTWEE241 pKa = 4.7KK242 pKa = 10.21IDD244 pKa = 3.76EE245 pKa = 4.37VFSVSDD251 pKa = 3.6FTAGLEE257 pKa = 4.09QFVNVPTPADD267 pKa = 3.57LPIEE271 pKa = 4.44LGCTEE276 pKa = 5.49CSTQGTITLSQGAFEE291 pKa = 4.79IDD293 pKa = 3.41VGEE296 pKa = 4.56LDD298 pKa = 3.81VVPDD302 pKa = 4.35FLQGGDD308 pKa = 3.77DD309 pKa = 4.02GKK311 pKa = 10.72DD312 pKa = 2.86ISSVITGGFIEE323 pKa = 5.06LKK325 pKa = 9.01ANSVFGHH332 pKa = 6.6FDD334 pKa = 3.41LFARR338 pKa = 11.84PRR340 pKa = 11.84AAGSFEE346 pKa = 3.64ITLFSLPVLGFTIPNIGRR364 pKa = 11.84AGAVFEE370 pKa = 5.2AGLSADD376 pKa = 3.64YY377 pKa = 10.78DD378 pKa = 4.05VEE380 pKa = 6.01GGLDD384 pKa = 3.65LSYY387 pKa = 11.16GIDD390 pKa = 3.36VTVPDD395 pKa = 4.68DD396 pKa = 3.47ASMRR400 pKa = 11.84IEE402 pKa = 4.98LGDD405 pKa = 3.71LKK407 pKa = 11.01KK408 pKa = 10.99SGVSGFAEE416 pKa = 4.39STLEE420 pKa = 3.91PLPFSANVTDD430 pKa = 4.14VDD432 pKa = 4.0ILLGLAFVPTIPIGFMFADD451 pKa = 3.95KK452 pKa = 10.82LDD454 pKa = 3.99ASVTVSMDD462 pKa = 3.89LPRR465 pKa = 11.84LDD467 pKa = 4.87ALITAKK473 pKa = 10.71PNGDD477 pKa = 3.76CKK479 pKa = 11.04SILGGNSTSVASLGNSTNGDD499 pKa = 4.13LSPVIIVDD507 pKa = 3.66ANVSIVLDD515 pKa = 3.65VGADD519 pKa = 3.59FSFPILPIDD528 pKa = 4.68PIGTAAEE535 pKa = 3.92IFSTKK540 pKa = 10.19FEE542 pKa = 5.01LGTRR546 pKa = 11.84CLAPGEE552 pKa = 4.48GFAQATGAAAAGVGNQLPGFVLTAGYY578 pKa = 10.28GDD580 pKa = 3.84SASTCGGSTVTVYY593 pKa = 10.43QPPPTGGAQYY603 pKa = 10.53PPYY606 pKa = 9.71EE607 pKa = 4.24PSAPVIEE614 pKa = 4.98PPVITPPPCSGYY626 pKa = 10.64DD627 pKa = 3.54CPDD630 pKa = 3.51SPEE633 pKa = 4.66SPPSPPVQSEE643 pKa = 4.35PNCNGYY649 pKa = 9.61EE650 pKa = 4.27CPKK653 pKa = 10.13PPSPPVEE660 pKa = 4.59SNPPPPPAEE669 pKa = 4.36SDD671 pKa = 3.64PGCNGYY677 pKa = 10.11DD678 pKa = 3.78CPPPVAPPQSEE689 pKa = 4.42PPSPPQSEE697 pKa = 4.28PVSPPVEE704 pKa = 4.24SDD706 pKa = 3.38PGCNGYY712 pKa = 9.88DD713 pKa = 3.94CPQQPPVEE721 pKa = 4.4PPIEE725 pKa = 4.39PPVTTTPCDD734 pKa = 3.58SSTLPPATEE743 pKa = 4.09PPKK746 pKa = 10.33TDD748 pKa = 3.33SPPPEE753 pKa = 4.68IPSAPVEE760 pKa = 4.44PPVSTAPPSPPEE772 pKa = 4.15QPSSPPEE779 pKa = 4.1SPPEE783 pKa = 4.1QPSSPPEE790 pKa = 4.09NPPEE794 pKa = 4.25QPSSPPEE801 pKa = 4.12NPPVEE806 pKa = 4.4PPKK809 pKa = 8.76TTAPPPPPSTDD820 pKa = 3.16VPEE823 pKa = 4.8PPSTTVCDD831 pKa = 4.57DD832 pKa = 3.69YY833 pKa = 11.9SCNEE837 pKa = 4.05SPEE840 pKa = 4.28NPPSQPAIPPMEE852 pKa = 4.67PPSTTEE858 pKa = 3.66SSEE861 pKa = 4.1QPTPPPEE868 pKa = 4.39NPPEE872 pKa = 4.27VPSVPVEE879 pKa = 4.15PPVSSSMVEE888 pKa = 4.16PPPEE892 pKa = 4.66APTPPPCDD900 pKa = 4.15GYY902 pKa = 11.4DD903 pKa = 3.46CTEE906 pKa = 4.17TPDD909 pKa = 3.83VPSQPVEE916 pKa = 4.28PPMSTPPPPPVDD928 pKa = 3.79EE929 pKa = 4.78PSVPAEE935 pKa = 4.31PPVSPPSTGDD945 pKa = 3.15IFPTPPPCDD954 pKa = 4.39GYY956 pKa = 11.32DD957 pKa = 3.44CPEE960 pKa = 4.3NPDD963 pKa = 3.76VPSQPAEE970 pKa = 4.25PPVSTPTPPPTVEE983 pKa = 4.3EE984 pKa = 4.16PSEE987 pKa = 4.05PVNPPVSPPSTGDD1000 pKa = 3.27IVPTPPPEE1008 pKa = 4.37NPEE1011 pKa = 4.28SPPEE1015 pKa = 3.98QPPTTSAPEE1024 pKa = 3.86CDD1026 pKa = 4.52GYY1028 pKa = 11.58GCEE1031 pKa = 5.1PPTEE1035 pKa = 4.25TPPPSGDD1042 pKa = 3.56EE1043 pKa = 3.73PSKK1046 pKa = 10.61PIEE1049 pKa = 4.65PPVSTPPTEE1058 pKa = 4.79PPTEE1062 pKa = 4.21TPPPCDD1068 pKa = 3.34GDD1070 pKa = 4.38CPQEE1074 pKa = 4.45PPAEE1078 pKa = 4.51PPVSTPVTEE1087 pKa = 5.1PPTEE1091 pKa = 4.17TPPPCDD1097 pKa = 3.46GDD1099 pKa = 4.49CPTEE1103 pKa = 4.52PPTEE1107 pKa = 4.21TPPPCDD1113 pKa = 5.01GYY1115 pKa = 11.39DD1116 pKa = 3.9CNNSQPPTEE1125 pKa = 5.15PPTEE1129 pKa = 4.09TPPPGGYY1136 pKa = 9.76EE1137 pKa = 3.73PSKK1140 pKa = 9.94PAEE1143 pKa = 4.6PPVSTPPTEE1152 pKa = 4.79PPTEE1156 pKa = 4.21TPPPCDD1162 pKa = 3.46GDD1164 pKa = 4.49CPTEE1168 pKa = 4.52PPTEE1172 pKa = 4.21TPPPCDD1178 pKa = 4.67GYY1180 pKa = 11.38DD1181 pKa = 3.61CPTEE1185 pKa = 4.07SSPPCSGPDD1194 pKa = 3.57CPSEE1198 pKa = 4.37PPVQTPPPSAEE1209 pKa = 4.37TPCTTSSTQTITLSTGGTGGGGYY1232 pKa = 9.81PNTTAGGYY1240 pKa = 9.5GHH1242 pKa = 7.26TPPSYY1247 pKa = 10.29PPATTMVEE1255 pKa = 4.12VPPPYY1260 pKa = 10.21GGYY1263 pKa = 9.43PPPASHH1269 pKa = 6.88TGNMTMQTGFLDD1281 pKa = 4.59GPTGTRR1287 pKa = 11.84PPMQTTSPAQFTGAAVPRR1305 pKa = 11.84AVPIAVDD1312 pKa = 3.54AKK1314 pKa = 10.16GLGWQGAVLVMSLFAGGFMLLL1335 pKa = 3.88

Molecular weight: 138.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2T2NI65|A0A2T2NI65_CORCC Uncharacterized protein OS=Corynespora cassiicola Philippines OX=1448308 GN=BS50DRAFT_51737 PE=4 SV=1
MM1 pKa = 7.34AVAVAAGGGLTAALRR16 pKa = 11.84PPSKK20 pKa = 10.37PSPTTTASRR29 pKa = 11.84ASQALRR35 pKa = 11.84LPSARR40 pKa = 11.84CPLPSALSQPSRR52 pKa = 11.84RR53 pKa = 11.84RR54 pKa = 11.84ASGASPATAPPLPTASIKK72 pKa = 9.8PANGPSALAPSRR84 pKa = 11.84PRR86 pKa = 11.84RR87 pKa = 11.84AARR90 pKa = 11.84LAMAARR96 pKa = 11.84APPPTAARR104 pKa = 11.84HH105 pKa = 5.13PPSAIRR111 pKa = 11.84HH112 pKa = 5.38PPSAIHH118 pKa = 6.74RR119 pKa = 11.84PSQTRR124 pKa = 11.84LPSQSRR130 pKa = 11.84LGG132 pKa = 3.55

Molecular weight: 13.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

17125

0

17125

7195570

49

7227

420.2

46.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.65 ± 0.017

1.378 ± 0.008

5.468 ± 0.014

6.055 ± 0.018

3.855 ± 0.012

6.917 ± 0.018

2.499 ± 0.009

4.957 ± 0.014

4.855 ± 0.016

8.829 ± 0.019

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.202 ± 0.007

3.706 ± 0.01

6.21 ± 0.026

3.923 ± 0.013

6.157 ± 0.017

8.078 ± 0.019

5.817 ± 0.013

6.018 ± 0.013

1.594 ± 0.007

2.834 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski