Eikenella longinqua

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella

Average proteome isoelectric point is 6.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2055 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1A9RXB5|A0A1A9RXB5_9NEIS Transcriptional regulator OS=Eikenella longinqua OX=1795827 GN=A7P95_06515 PE=4 SV=1
MM1 pKa = 7.64GLGNFYY7 pKa = 10.66NQQLSLSEE15 pKa = 4.67VIDD18 pKa = 3.9CAKK21 pKa = 10.58LFNNNDD27 pKa = 3.09TDD29 pKa = 3.74KK30 pKa = 10.76FAKK33 pKa = 10.17FPYY36 pKa = 9.88LYY38 pKa = 10.76SADD41 pKa = 4.05EE42 pKa = 4.39DD43 pKa = 4.05SGPLKK48 pKa = 10.29LTTSCYY54 pKa = 10.51LSDD57 pKa = 3.76SPEE60 pKa = 5.16IIDD63 pKa = 4.2KK64 pKa = 11.29KK65 pKa = 10.55EE66 pKa = 3.82VFPKK70 pKa = 10.65LVLEE74 pKa = 4.67NGLSVLCSGEE84 pKa = 3.69IFMDD88 pKa = 3.99VYY90 pKa = 11.69DD91 pKa = 5.35DD92 pKa = 5.28LDD94 pKa = 3.53DD95 pKa = 5.45RR96 pKa = 11.84YY97 pKa = 10.69PDD99 pKa = 3.44FTKK102 pKa = 10.7EE103 pKa = 3.69QFIAALNYY111 pKa = 10.91YY112 pKa = 8.89MDD114 pKa = 4.43NDD116 pKa = 4.43DD117 pKa = 4.49YY118 pKa = 11.82IEE120 pKa = 3.92FF121 pKa = 4.64

Molecular weight: 13.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1A9S2T0|A0A1A9S2T0_9NEIS Uncharacterized protein OS=Eikenella longinqua OX=1795827 GN=A7P95_01475 PE=4 SV=1
MM1 pKa = 7.37SWFLSRR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 10.39GYY12 pKa = 10.9LKK14 pKa = 9.78MGKK17 pKa = 10.04ASFCKK22 pKa = 10.56ANTIALLPVLLFALHH37 pKa = 6.23AQAEE41 pKa = 4.7TVSGEE46 pKa = 4.3VVRR49 pKa = 11.84VWDD52 pKa = 4.08GDD54 pKa = 4.11SLHH57 pKa = 7.03LLDD60 pKa = 5.68HH61 pKa = 6.96AGQRR65 pKa = 11.84HH66 pKa = 6.83KK67 pKa = 10.85IRR69 pKa = 11.84LADD72 pKa = 3.2IDD74 pKa = 4.32APEE77 pKa = 4.62LEE79 pKa = 4.36QPQGRR84 pKa = 11.84SCRR87 pKa = 11.84NRR89 pKa = 11.84LAEE92 pKa = 4.12QVLHH96 pKa = 6.53RR97 pKa = 11.84RR98 pKa = 11.84VQAEE102 pKa = 3.93IVDD105 pKa = 4.05TDD107 pKa = 3.27PHH109 pKa = 6.0GRR111 pKa = 11.84QVAYY115 pKa = 9.86IRR117 pKa = 11.84LNGADD122 pKa = 3.67INRR125 pKa = 11.84QQIADD130 pKa = 3.67GCAWHH135 pKa = 5.93YY136 pKa = 11.02RR137 pKa = 11.84RR138 pKa = 11.84FARR141 pKa = 11.84QRR143 pKa = 11.84QSPSAYY149 pKa = 9.39AAYY152 pKa = 9.93AAAEE156 pKa = 4.16EE157 pKa = 4.7GAKK160 pKa = 9.24QRR162 pKa = 11.84RR163 pKa = 11.84AGVWRR168 pKa = 11.84QDD170 pKa = 3.1APQAPWQFRR179 pKa = 11.84RR180 pKa = 11.84QQRR183 pKa = 11.84RR184 pKa = 11.84PHH186 pKa = 5.68

Molecular weight: 21.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2055

0

2055

586508

41

2341

285.4

31.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.654 ± 0.089

1.048 ± 0.021

4.792 ± 0.04

5.872 ± 0.06

3.863 ± 0.04

7.626 ± 0.05

2.466 ± 0.029

5.237 ± 0.042

4.01 ± 0.047

10.765 ± 0.077

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.395 ± 0.027

3.505 ± 0.046

4.891 ± 0.04

4.947 ± 0.046

6.209 ± 0.047

5.327 ± 0.039

4.637 ± 0.041

6.516 ± 0.049

1.388 ± 0.027

2.852 ± 0.037
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski