Weissella cryptocerci

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Weissella

Average proteome isoelectric point is 6.47

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2588 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P6YRS4|A0A4P6YRS4_9LACO GRAM_POS_ANCHORING domain-containing protein OS=Weissella cryptocerci OX=2506420 GN=EQG49_02190 PE=4 SV=1
MM1 pKa = 6.9STHH4 pKa = 6.74AVTIVTQSMVGNEE17 pKa = 4.25PEE19 pKa = 4.17PFFDD23 pKa = 5.24VITFLADD30 pKa = 3.46LDD32 pKa = 3.92EE33 pKa = 4.68TQAEE37 pKa = 4.21DD38 pKa = 3.32VAYY41 pKa = 10.57LRR43 pKa = 11.84EE44 pKa = 4.13LAEE47 pKa = 4.29KK48 pKa = 8.58TQLSPAYY55 pKa = 9.39EE56 pKa = 3.9EE57 pKa = 5.68DD58 pKa = 3.55GQKK61 pKa = 10.73VYY63 pKa = 11.3DD64 pKa = 3.92VVGKK68 pKa = 10.89VIDD71 pKa = 3.99VYY73 pKa = 11.11EE74 pKa = 5.21LIDD77 pKa = 4.68EE78 pKa = 4.41ITFTGNPEE86 pKa = 3.9VNSRR90 pKa = 11.84QILPAKK96 pKa = 9.85PMNLEE101 pKa = 3.95QFIEE105 pKa = 4.7TYY107 pKa = 10.3YY108 pKa = 11.01SDD110 pKa = 4.35YY111 pKa = 11.15VLEE114 pKa = 4.64DD115 pKa = 3.58AEE117 pKa = 4.48SS118 pKa = 3.11

Molecular weight: 13.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P6YSC4|A0A4P6YSC4_9LACO Uncharacterized protein OS=Weissella cryptocerci OX=2506420 GN=EQG49_03150 PE=4 SV=1
MM1 pKa = 7.93RR2 pKa = 11.84KK3 pKa = 9.64LLMPILIGLLICSALVAIVVGSTHH27 pKa = 5.91VRR29 pKa = 11.84LDD31 pKa = 3.8DD32 pKa = 5.33LITGQTMAWQIVGQLRR48 pKa = 11.84IPRR51 pKa = 11.84ILTAIIAGVILGVTGLLLQIVTRR74 pKa = 11.84NSLVDD79 pKa = 3.61SSILGLMNGTQFLSLLAGITVPNFFGGKK107 pKa = 8.56VLAGALLGVVVVVMWRR123 pKa = 11.84FIVWGRR129 pKa = 11.84LQNYY133 pKa = 9.95ALILTGIALAMTFAALTEE151 pKa = 4.25LLDD154 pKa = 3.61SGFNVNVSNLAVVTWSQVWVLGIILLASLIVLVLLSSHH192 pKa = 6.47LKK194 pKa = 9.83FYY196 pKa = 10.96AVSAVQARR204 pKa = 11.84QLGEE208 pKa = 4.12DD209 pKa = 3.99EE210 pKa = 5.83NRR212 pKa = 11.84TTWFILLVVGLLIGGVTSVIGVVYY236 pKa = 8.77FVGVILPQLAQLMLPRR252 pKa = 11.84QSRR255 pKa = 11.84LKK257 pKa = 10.88LFVPTALLGALLLLNADD274 pKa = 3.77TLARR278 pKa = 11.84TILAPRR284 pKa = 11.84EE285 pKa = 3.95LSATAILLVICGPVFIGLVLRR306 pKa = 11.84KK307 pKa = 9.49VKK309 pKa = 10.28HH310 pKa = 5.35AA311 pKa = 4.26

Molecular weight: 33.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2588

0

2588

794941

36

2296

307.2

34.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.868 ± 0.058

0.221 ± 0.01

5.852 ± 0.049

5.52 ± 0.06

4.253 ± 0.039

6.831 ± 0.054

1.923 ± 0.023

6.885 ± 0.049

6.422 ± 0.059

9.255 ± 0.063

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.716 ± 0.028

5.165 ± 0.043

3.489 ± 0.031

4.194 ± 0.036

3.704 ± 0.044

5.714 ± 0.04

6.855 ± 0.062

7.52 ± 0.044

1.059 ± 0.021

3.555 ± 0.035
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski