Turkey aviadenovirus 5

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus; Turkey aviadenovirus D

Average proteome isoelectric point is 6.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 37 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|U5NEG4|U5NEG4_9ADEN ORF17 OS=Turkey aviadenovirus 5 OX=1408258 PE=4 SV=1
MM1 pKa = 7.26MNDD4 pKa = 3.09EE5 pKa = 4.44QLAEE9 pKa = 4.57LLQQAPDD16 pKa = 3.99DD17 pKa = 4.69GEE19 pKa = 4.47DD20 pKa = 3.55EE21 pKa = 4.32NGEE24 pKa = 4.29LEE26 pKa = 4.46MPAALHH32 pKa = 7.31AYY34 pKa = 9.5QLLCFEE40 pKa = 5.55SYY42 pKa = 10.54AIHH45 pKa = 6.74VGSCSCHH52 pKa = 6.02SLQLTRR58 pKa = 11.84LGLSACHH65 pKa = 5.79TAPSDD70 pKa = 3.19LATYY74 pKa = 9.59VWARR78 pKa = 11.84LQDD81 pKa = 3.85DD82 pKa = 4.21FNVAGLYY89 pKa = 9.02FVAMWACPAFRR100 pKa = 11.84DD101 pKa = 4.69FSPVFMSRR109 pKa = 11.84AVGRR113 pKa = 11.84NEE115 pKa = 4.61DD116 pKa = 3.69VLGMTIHH123 pKa = 6.36VGDD126 pKa = 4.07AARR129 pKa = 11.84LAFLIAVSRR138 pKa = 11.84MGEE141 pKa = 3.98AGASPCLYY149 pKa = 8.56MRR151 pKa = 11.84KK152 pKa = 8.71MDD154 pKa = 3.78IDD156 pKa = 3.66VEE158 pKa = 4.33EE159 pKa = 4.46QVVHH163 pKa = 6.42MFTDD167 pKa = 3.35DD168 pKa = 3.4WFSEE172 pKa = 4.42FANLLYY178 pKa = 10.41YY179 pKa = 9.04WQAAEE184 pKa = 3.55WRR186 pKa = 11.84FINEE190 pKa = 3.67QKK192 pKa = 11.09

Molecular weight: 21.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|U5NEL9|U5NEL9_9ADEN DNA polymerase OS=Turkey aviadenovirus 5 OX=1408258 PE=3 SV=1
MM1 pKa = 7.45SVLISPSDD9 pKa = 3.51NRR11 pKa = 11.84GWGAGMRR18 pKa = 11.84YY19 pKa = 9.22RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84TSMRR26 pKa = 11.84GVGRR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84MTLRR36 pKa = 11.84QLLGLGARR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84TRR50 pKa = 11.84PTTVSNRR57 pKa = 11.84LVVVSTRR64 pKa = 11.84RR65 pKa = 11.84RR66 pKa = 11.84SSRR69 pKa = 11.84RR70 pKa = 11.84RR71 pKa = 11.84RR72 pKa = 3.37

Molecular weight: 8.54 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

36

1

37

13304

46

1247

359.6

40.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.434 ± 0.336

1.849 ± 0.241

5.622 ± 0.209

5.562 ± 0.502

4.142 ± 0.266

6.374 ± 0.441

2.21 ± 0.235

4.307 ± 0.252

3.751 ± 0.263

9.313 ± 0.353

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.3 ± 0.167

4.262 ± 0.368

6.254 ± 0.288

3.593 ± 0.203

7.118 ± 0.484

7.426 ± 0.299

6.562 ± 0.421

6.622 ± 0.212

1.473 ± 0.147

3.826 ± 0.305
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski