Amino acid dipepetide frequency for Fusarium solani virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
18.26AlaAla: 18.26 ± 5.137
2.148AlaCys: 2.148 ± 1.65
4.296AlaAsp: 4.296 ± 3.3
4.296AlaGlu: 4.296 ± 1.144
5.371AlaPhe: 5.371 ± 1.8
7.519AlaGly: 7.519 ± 2.812
3.222AlaHis: 3.222 ± 2.475
2.148AlaIle: 2.148 ± 0.169
3.222AlaLys: 3.222 ± 0.994
1.074AlaLeu: 1.074 ± 0.656
3.222AlaMet: 3.222 ± 1.969
0.0AlaAsn: 0.0 ± 0.0
5.371AlaPro: 5.371 ± 1.162
3.222AlaGln: 3.222 ± 2.475
4.296AlaArg: 4.296 ± 0.337
3.222AlaSer: 3.222 ± 2.475
7.519AlaThr: 7.519 ± 1.632
6.445AlaVal: 6.445 ± 1.987
3.222AlaTrp: 3.222 ± 0.488
1.074AlaTyr: 1.074 ± 0.825
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
0.0CysAsp: 0.0 ± 0.0
0.0CysGlu: 0.0 ± 0.0
0.0CysPhe: 0.0 ± 0.0
1.074CysGly: 1.074 ± 0.825
0.0CysHis: 0.0 ± 0.0
1.074CysIle: 1.074 ± 0.825
0.0CysLys: 0.0 ± 0.0
1.074CysLeu: 1.074 ± 0.656
0.0CysMet: 0.0 ± 0.0
0.0CysAsn: 0.0 ± 0.0
1.074CysPro: 1.074 ± 0.656
1.074CysGln: 1.074 ± 0.656
0.0CysArg: 0.0 ± 0.0
0.0CysSer: 0.0 ± 0.0
0.0CysThr: 0.0 ± 0.0
2.148CysVal: 2.148 ± 1.65
0.0CysTrp: 0.0 ± 0.0
1.074CysTyr: 1.074 ± 0.656
0.0CysXaa: 0.0 ± 0.0
Asp
5.371AspAla: 5.371 ± 1.162
0.0AspCys: 0.0 ± 0.0
3.222AspAsp: 3.222 ± 0.488
1.074AspGlu: 1.074 ± 0.656
4.296AspPhe: 4.296 ± 1.819
4.296AspGly: 4.296 ± 1.144
0.0AspHis: 0.0 ± 0.0
2.148AspIle: 2.148 ± 1.313
0.0AspLys: 0.0 ± 0.0
4.296AspLeu: 4.296 ± 1.144
2.148AspMet: 2.148 ± 0.169
2.148AspAsn: 2.148 ± 0.169
7.519AspPro: 7.519 ± 1.632
2.148AspGln: 2.148 ± 0.169
2.148AspArg: 2.148 ± 1.65
5.371AspSer: 5.371 ± 0.319
5.371AspThr: 5.371 ± 0.319
4.296AspVal: 4.296 ± 0.337
2.148AspTrp: 2.148 ± 0.169
0.0AspTyr: 0.0 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.222GluAla: 3.222 ± 0.994
0.0GluCys: 0.0 ± 0.0
2.148GluAsp: 2.148 ± 1.313
2.148GluGlu: 2.148 ± 0.169
2.148GluPhe: 2.148 ± 1.65
6.445GluGly: 6.445 ± 2.457
0.0GluHis: 0.0 ± 0.0
2.148GluIle: 2.148 ± 1.313
1.074GluLys: 1.074 ± 0.656
4.296GluLeu: 4.296 ± 0.337
1.074GluMet: 1.074 ± 0.656
0.0GluAsn: 0.0 ± 0.0
2.148GluPro: 2.148 ± 0.169
0.0GluGln: 0.0 ± 0.0
2.148GluArg: 2.148 ± 0.169
3.222GluSer: 3.222 ± 0.994
3.222GluThr: 3.222 ± 0.488
1.074GluVal: 1.074 ± 0.656
3.222GluTrp: 3.222 ± 1.969
1.074GluTyr: 1.074 ± 0.656
0.0GluXaa: 0.0 ± 0.0
Phe
4.296PheAla: 4.296 ± 3.3
0.0PheCys: 0.0 ± 0.0
5.371PheAsp: 5.371 ± 1.8
2.148PheGlu: 2.148 ± 1.313
1.074PhePhe: 1.074 ± 0.825
5.371PheGly: 5.371 ± 2.644
0.0PheHis: 0.0 ± 0.0
1.074PheIle: 1.074 ± 0.656
2.148PheLys: 2.148 ± 1.313
4.296PheLeu: 4.296 ± 1.819
2.148PheMet: 2.148 ± 1.313
0.0PheAsn: 0.0 ± 0.0
3.222PhePro: 3.222 ± 0.994
2.148PheGln: 2.148 ± 0.169
3.222PheArg: 3.222 ± 0.488
7.519PheSer: 7.519 ± 0.15
2.148PheThr: 2.148 ± 1.313
3.222PheVal: 3.222 ± 0.994
2.148PheTrp: 2.148 ± 0.169
1.074PheTyr: 1.074 ± 0.656
0.0PheXaa: 0.0 ± 0.0
Gly
5.371GlyAla: 5.371 ± 2.644
1.074GlyCys: 1.074 ± 0.656
6.445GlyAsp: 6.445 ± 0.506
4.296GlyGlu: 4.296 ± 1.819
1.074GlyPhe: 1.074 ± 0.656
4.296GlyGly: 4.296 ± 2.625
3.222GlyHis: 3.222 ± 1.969
2.148GlyIle: 2.148 ± 1.65
6.445GlyLys: 6.445 ± 0.975
10.741GlyLeu: 10.741 ± 2.325
4.296GlyMet: 4.296 ± 2.625
1.074GlyAsn: 1.074 ± 0.656
2.148GlyPro: 2.148 ± 1.313
2.148GlyGln: 2.148 ± 0.169
5.371GlyArg: 5.371 ± 1.8
7.519GlySer: 7.519 ± 2.812
2.148GlyThr: 2.148 ± 1.65
8.593GlyVal: 8.593 ± 0.675
2.148GlyTrp: 2.148 ± 1.313
2.148GlyTyr: 2.148 ± 0.169
0.0GlyXaa: 0.0 ± 0.0
His
1.074HisAla: 1.074 ± 0.656
0.0HisCys: 0.0 ± 0.0
1.074HisAsp: 1.074 ± 0.656
0.0HisGlu: 0.0 ± 0.0
1.074HisPhe: 1.074 ± 0.825
1.074HisGly: 1.074 ± 0.656
1.074HisHis: 1.074 ± 0.825
0.0HisIle: 0.0 ± 0.0
1.074HisLys: 1.074 ± 0.825
1.074HisLeu: 1.074 ± 0.656
1.074HisMet: 1.074 ± 0.656
0.0HisAsn: 0.0 ± 0.0
0.0HisPro: 0.0 ± 0.0
0.0HisGln: 0.0 ± 0.0
2.148HisArg: 2.148 ± 1.313
2.148HisSer: 2.148 ± 1.65
1.074HisThr: 1.074 ± 0.656
2.148HisVal: 2.148 ± 1.65
1.074HisTrp: 1.074 ± 0.656
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.148IleAla: 2.148 ± 1.313
0.0IleCys: 0.0 ± 0.0
1.074IleAsp: 1.074 ± 0.656
0.0IleGlu: 0.0 ± 0.0
2.148IlePhe: 2.148 ± 0.169
1.074IleGly: 1.074 ± 0.656
1.074IleHis: 1.074 ± 0.656
1.074IleIle: 1.074 ± 0.825
0.0IleLys: 0.0 ± 0.0
5.371IleLeu: 5.371 ± 0.319
0.0IleMet: 0.0 ± 0.0
1.074IleAsn: 1.074 ± 0.656
1.074IlePro: 1.074 ± 0.825
2.148IleGln: 2.148 ± 0.169
2.148IleArg: 2.148 ± 0.169
3.222IleSer: 3.222 ± 0.994
1.074IleThr: 1.074 ± 0.656
1.074IleVal: 1.074 ± 0.656
0.0IleTrp: 0.0 ± 0.0
3.222IleTyr: 3.222 ± 1.969
0.0IleXaa: 0.0 ± 0.0
Lys
1.074LysAla: 1.074 ± 0.656
0.0LysCys: 0.0 ± 0.0
1.074LysAsp: 1.074 ± 0.656
1.074LysGlu: 1.074 ± 0.825
4.296LysPhe: 4.296 ± 1.144
3.222LysGly: 3.222 ± 1.969
0.0LysHis: 0.0 ± 0.0
0.0LysIle: 0.0 ± 0.0
4.296LysLys: 4.296 ± 0.337
4.296LysLeu: 4.296 ± 1.144
0.0LysMet: 0.0 ± 0.0
5.371LysAsn: 5.371 ± 1.8
1.074LysPro: 1.074 ± 0.656
1.074LysGln: 1.074 ± 0.656
6.445LysArg: 6.445 ± 0.975
2.148LysSer: 2.148 ± 1.313
3.222LysThr: 3.222 ± 1.969
3.222LysVal: 3.222 ± 0.488
1.074LysTrp: 1.074 ± 0.656
4.296LysTyr: 4.296 ± 1.819
0.0LysXaa: 0.0 ± 0.0
Leu
12.889LeuAla: 12.889 ± 5.456
1.074LeuCys: 1.074 ± 0.656
2.148LeuAsp: 2.148 ± 0.169
2.148LeuGlu: 2.148 ± 0.169
6.445LeuPhe: 6.445 ± 0.975
9.667LeuGly: 9.667 ± 0.018
2.148LeuHis: 2.148 ± 1.313
2.148LeuIle: 2.148 ± 0.169
2.148LeuLys: 2.148 ± 1.313
5.371LeuLeu: 5.371 ± 0.319
4.296LeuMet: 4.296 ± 1.885
2.148LeuAsn: 2.148 ± 1.65
2.148LeuPro: 2.148 ± 1.65
2.148LeuGln: 2.148 ± 0.169
2.148LeuArg: 2.148 ± 0.169
7.519LeuSer: 7.519 ± 1.632
4.296LeuThr: 4.296 ± 1.819
5.371LeuVal: 5.371 ± 0.319
2.148LeuTrp: 2.148 ± 0.169
4.296LeuTyr: 4.296 ± 2.625
0.0LeuXaa: 0.0 ± 0.0
Met
1.074MetAla: 1.074 ± 0.656
0.0MetCys: 0.0 ± 0.0
2.148MetAsp: 2.148 ± 1.313
3.222MetGlu: 3.222 ± 1.969
1.074MetPhe: 1.074 ± 0.656
2.148MetGly: 2.148 ± 1.65
0.0MetHis: 0.0 ± 0.0
0.0MetIle: 0.0 ± 0.0
3.222MetLys: 3.222 ± 1.969
1.074MetLeu: 1.074 ± 0.656
0.0MetMet: 0.0 ± 0.0
0.0MetAsn: 0.0 ± 0.0
4.296MetPro: 4.296 ± 2.625
0.0MetGln: 0.0 ± 0.0
2.148MetArg: 2.148 ± 1.313
4.296MetSer: 4.296 ± 1.819
0.0MetThr: 0.0 ± 0.0
4.296MetVal: 4.296 ± 2.625
1.074MetTrp: 1.074 ± 0.656
2.148MetTyr: 2.148 ± 1.313
0.0MetXaa: 0.0 ± 0.0
Asn
2.148AsnAla: 2.148 ± 0.169
0.0AsnCys: 0.0 ± 0.0
0.0AsnAsp: 0.0 ± 0.0
0.0AsnGlu: 0.0 ± 0.0
2.148AsnPhe: 2.148 ± 1.65
0.0AsnGly: 0.0 ± 0.0
1.074AsnHis: 1.074 ± 0.825
2.148AsnIle: 2.148 ± 1.313
1.074AsnLys: 1.074 ± 0.656
2.148AsnLeu: 2.148 ± 1.313
1.074AsnMet: 1.074 ± 0.825
0.0AsnAsn: 0.0 ± 0.0
1.074AsnPro: 1.074 ± 0.825
0.0AsnGln: 0.0 ± 0.0
4.296AsnArg: 4.296 ± 3.3
1.074AsnSer: 1.074 ± 0.825
4.296AsnThr: 4.296 ± 0.337
1.074AsnVal: 1.074 ± 0.656
1.074AsnTrp: 1.074 ± 0.656
0.0AsnTyr: 0.0 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.222ProAla: 3.222 ± 0.488
2.148ProCys: 2.148 ± 1.313
5.371ProAsp: 5.371 ± 1.8
2.148ProGlu: 2.148 ± 1.313
2.148ProPhe: 2.148 ± 0.169
7.519ProGly: 7.519 ± 1.331
0.0ProHis: 0.0 ± 0.0
1.074ProIle: 1.074 ± 0.656
2.148ProLys: 2.148 ± 0.169
2.148ProLeu: 2.148 ± 1.313
1.074ProMet: 1.074 ± 0.825
0.0ProAsn: 0.0 ± 0.0
1.074ProPro: 1.074 ± 0.656
1.074ProGln: 1.074 ± 0.825
4.296ProArg: 4.296 ± 2.625
5.371ProSer: 5.371 ± 0.319
5.371ProThr: 5.371 ± 0.319
6.445ProVal: 6.445 ± 3.469
1.074ProTrp: 1.074 ± 0.656
0.0ProTyr: 0.0 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.074GlnAla: 1.074 ± 0.825
0.0GlnCys: 0.0 ± 0.0
1.074GlnAsp: 1.074 ± 0.825
1.074GlnGlu: 1.074 ± 0.656
1.074GlnPhe: 1.074 ± 0.825
3.222GlnGly: 3.222 ± 1.969
1.074GlnHis: 1.074 ± 0.656
0.0GlnIle: 0.0 ± 0.0
1.074GlnLys: 1.074 ± 0.656
1.074GlnLeu: 1.074 ± 0.656
1.074GlnMet: 1.074 ± 0.825
3.222GlnAsn: 3.222 ± 2.475
1.074GlnPro: 1.074 ± 0.825
1.074GlnGln: 1.074 ± 0.825
4.296GlnArg: 4.296 ± 1.144
3.222GlnSer: 3.222 ± 0.488
2.148GlnThr: 2.148 ± 1.65
0.0GlnVal: 0.0 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
5.371ArgAla: 5.371 ± 1.162
0.0ArgCys: 0.0 ± 0.0
4.296ArgAsp: 4.296 ± 1.144
1.074ArgGlu: 1.074 ± 0.656
5.371ArgPhe: 5.371 ± 1.8
6.445ArgGly: 6.445 ± 0.975
0.0ArgHis: 0.0 ± 0.0
2.148ArgIle: 2.148 ± 1.313
3.222ArgLys: 3.222 ± 1.969
7.519ArgLeu: 7.519 ± 0.15
3.222ArgMet: 3.222 ± 1.969
2.148ArgAsn: 2.148 ± 0.169
4.296ArgPro: 4.296 ± 1.819
3.222ArgGln: 3.222 ± 0.488
7.519ArgArg: 7.519 ± 3.113
4.296ArgSer: 4.296 ± 1.144
1.074ArgThr: 1.074 ± 0.825
6.445ArgVal: 6.445 ± 3.469
2.148ArgTrp: 2.148 ± 1.313
5.371ArgTyr: 5.371 ± 1.162
0.0ArgXaa: 0.0 ± 0.0
Ser
6.445SerAla: 6.445 ± 0.975
1.074SerCys: 1.074 ± 0.825
5.371SerAsp: 5.371 ± 2.644
7.519SerGlu: 7.519 ± 0.15
2.148SerPhe: 2.148 ± 1.313
7.519SerGly: 7.519 ± 4.294
2.148SerHis: 2.148 ± 0.169
4.296SerIle: 4.296 ± 0.337
2.148SerLys: 2.148 ± 0.169
10.741SerLeu: 10.741 ± 2.325
1.074SerMet: 1.074 ± 0.656
1.074SerAsn: 1.074 ± 0.825
3.222SerPro: 3.222 ± 0.488
1.074SerGln: 1.074 ± 0.825
5.371SerArg: 5.371 ± 1.162
9.667SerSer: 9.667 ± 5.943
4.296SerThr: 4.296 ± 0.337
7.519SerVal: 7.519 ± 0.15
1.074SerTrp: 1.074 ± 0.656
2.148SerTyr: 2.148 ± 1.65
0.0SerXaa: 0.0 ± 0.0
Thr
5.371ThrAla: 5.371 ± 0.319
0.0ThrCys: 0.0 ± 0.0
3.222ThrAsp: 3.222 ± 0.488
3.222ThrGlu: 3.222 ± 0.488
1.074ThrPhe: 1.074 ± 0.825
2.148ThrGly: 2.148 ± 1.65
0.0ThrHis: 0.0 ± 0.0
0.0ThrIle: 0.0 ± 0.0
6.445ThrLys: 6.445 ± 2.457
5.371ThrLeu: 5.371 ± 1.162
2.148ThrMet: 2.148 ± 1.313
0.0ThrAsn: 0.0 ± 0.0
3.222ThrPro: 3.222 ± 1.969
2.148ThrGln: 2.148 ± 1.313
7.519ThrArg: 7.519 ± 1.331
4.296ThrSer: 4.296 ± 0.337
3.222ThrThr: 3.222 ± 0.488
4.296ThrVal: 4.296 ± 1.819
0.0ThrTrp: 0.0 ± 0.0
2.148ThrTyr: 2.148 ± 0.169
0.0ThrXaa: 0.0 ± 0.0
Val
5.371ValAla: 5.371 ± 2.644
0.0ValCys: 0.0 ± 0.0
5.371ValAsp: 5.371 ± 1.162
4.296ValGlu: 4.296 ± 1.144
5.371ValPhe: 5.371 ± 4.125
3.222ValGly: 3.222 ± 1.969
2.148ValHis: 2.148 ± 0.169
1.074ValIle: 1.074 ± 0.825
4.296ValLys: 4.296 ± 0.337
3.222ValLeu: 3.222 ± 0.994
2.148ValMet: 2.148 ± 1.313
5.371ValAsn: 5.371 ± 1.162
5.371ValPro: 5.371 ± 1.8
2.148ValGln: 2.148 ± 0.169
5.371ValArg: 5.371 ± 0.319
9.667ValSer: 9.667 ± 4.462
1.074ValThr: 1.074 ± 0.825
5.371ValVal: 5.371 ± 2.644
2.148ValTrp: 2.148 ± 0.169
3.222ValTyr: 3.222 ± 0.994
0.0ValXaa: 0.0 ± 0.0
Trp
1.074TrpAla: 1.074 ± 0.825
0.0TrpCys: 0.0 ± 0.0
3.222TrpAsp: 3.222 ± 0.488
0.0TrpGlu: 0.0 ± 0.0
2.148TrpPhe: 2.148 ± 1.313
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
4.296TrpIle: 4.296 ± 2.625
1.074TrpLys: 1.074 ± 0.656
5.371TrpLeu: 5.371 ± 0.319
1.074TrpMet: 1.074 ± 0.656
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
2.148TrpArg: 2.148 ± 1.313
2.148TrpSer: 2.148 ± 0.169
2.148TrpThr: 2.148 ± 1.313
1.074TrpVal: 1.074 ± 0.656
1.074TrpTrp: 1.074 ± 0.656
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
4.296TyrAla: 4.296 ± 1.144
1.074TyrCys: 1.074 ± 0.825
1.074TyrAsp: 1.074 ± 0.825
1.074TyrGlu: 1.074 ± 0.825
2.148TyrPhe: 2.148 ± 1.313
6.445TyrGly: 6.445 ± 0.975
0.0TyrHis: 0.0 ± 0.0
0.0TyrIle: 0.0 ± 0.0
2.148TyrLys: 2.148 ± 1.313
3.222TyrLeu: 3.222 ± 0.994
0.0TyrMet: 0.0 ± 0.0
1.074TyrAsn: 1.074 ± 0.825
4.296TyrPro: 4.296 ± 1.144
0.0TyrGln: 0.0 ± 0.0
2.148TyrArg: 2.148 ± 1.313
0.0TyrSer: 0.0 ± 0.0
2.148TyrThr: 2.148 ± 0.169
2.148TyrVal: 2.148 ± 1.65
0.0TyrTrp: 0.0 ± 0.0
1.074TyrTyr: 1.074 ± 0.656
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (932 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski